Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 MTATP6P23-201ENST00000440153 476 ntBASIC-0.83□□□□□ -2.54
HMGA1P17096 AC093019.1-201ENST00000443135 252 ntBASIC-0.83□□□□□ -2.54
HMGA1P17096 TPT1P7-201ENST00000458300 517 ntBASIC-0.83□□□□□ -2.54
HMGA1P17096 snoU13.19-201ENST00000459148 104 ntBASIC-0.83□□□□□ -2.54
HMGA1P17096 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC-0.83□□□□□ -2.54
HMGA1P17096 AC048346.1-201ENST00000510247 144 ntBASIC-0.83□□□□□ -2.54
HMGA1P17096 SNORA76.2-201ENST00000517095 137 ntBASIC-0.83□□□□□ -2.54
HMGA1P17096 RNU6-889P-201ENST00000517189 103 ntBASIC-0.83□□□□□ -2.54
HMGA1P17096 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC-0.83□□□□□ -2.54
HMGA1P17096 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC-0.83□□□□□ -2.54
HMGA1P17096 DBF4P1-201ENST00000412976 1892 ntBASIC-0.84□□□□□ -2.54
HMGA1P17096 RNU6-1297P-201ENST00000384415 104 ntBASIC-0.84□□□□□ -2.54
HMGA1P17096 RNU6-30P-201ENST00000384561 107 ntBASIC-0.84□□□□□ -2.54
HMGA1P17096 RNU6-754P-201ENST00000391166 107 ntBASIC-0.84□□□□□ -2.54
HMGA1P17096 AL590084.2-201ENST00000401481 382 ntBASIC-0.84□□□□□ -2.54
HMGA1P17096 SNORD111-201ENST00000408139 94 ntBASIC-0.84□□□□□ -2.54
HMGA1P17096 RNU2-59P-201ENST00000410482 191 ntBASIC-0.84□□□□□ -2.54
HMGA1P17096 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC-0.84□□□□□ -2.54
HMGA1P17096 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC-0.84□□□□□ -2.54
HMGA1P17096 MTCO3P43-201ENST00000440974 771 ntBASIC-0.84□□□□□ -2.54
HMGA1P17096 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC-0.84□□□□□ -2.54
HMGA1P17096 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC-0.84□□□□□ -2.54
HMGA1P17096 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC-0.84□□□□□ -2.54
HMGA1P17096 MIR5697-201ENST00000578045 78 ntBASIC-0.84□□□□□ -2.54
HMGA1P17096 AL360085.1-201ENST00000604713 532 ntBASIC-0.84□□□□□ -2.54
HMGA1P17096 MIR3666-201ENST00000607845 111 ntBASIC-0.84□□□□□ -2.54
HMGA1P17096 TTK-211ENST00000627129 240 ntTSL 5 BASIC-0.84□□□□□ -2.54
HMGA1P17096 SNORD32B-201ENST00000364460 84 ntBASIC-0.85□□□□□ -2.55
HMGA1P17096 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.85□□□□□ -2.55
HMGA1P17096 MIR635-201ENST00000384830 98 ntBASIC-0.85□□□□□ -2.55
HMGA1P17096 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC-0.85□□□□□ -2.55
HMGA1P17096 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC-0.85□□□□□ -2.55
HMGA1P17096 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC-0.85□□□□□ -2.55
HMGA1P17096 MIR3192-201ENST00000584920 77 ntBASIC-0.85□□□□□ -2.55
HMGA1P17096 uc_338.28-201ENST00000612082 187 ntBASIC-0.85□□□□□ -2.55
HMGA1P17096 MIR6755-201ENST00000619993 66 ntBASIC-0.85□□□□□ -2.55
HMGA1P17096 Y_RNA.167-201ENST00000363735 109 ntBASIC-0.86□□□□□ -2.55
HMGA1P17096 RNY1P7-201ENST00000384743 110 ntBASIC-0.86□□□□□ -2.55
HMGA1P17096 TRIM60P5Y-201ENST00000413946 574 ntBASIC-0.86□□□□□ -2.55
HMGA1P17096 STAG3L5P-204ENST00000443759 179 ntBASIC-0.86□□□□□ -2.55
HMGA1P17096 AL122001.1-201ENST00000457027 370 ntBASIC-0.86□□□□□ -2.55
HMGA1P17096 AC114755.3-201ENST00000481111 251 ntBASIC-0.86□□□□□ -2.55
HMGA1P17096 AL163973.1-201ENST00000484753 577 ntBASIC-0.86□□□□□ -2.55
HMGA1P17096 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC-0.86□□□□□ -2.55
HMGA1P17096 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.86□□□□□ -2.55
HMGA1P17096 AC068790.2-201ENST00000602601 557 ntBASIC-0.86□□□□□ -2.55
HMGA1P17096 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC-0.86□□□□□ -2.55
HMGA1P17096 AP000484.1-201ENST00000620067 1252 ntBASIC-0.86□□□□□ -2.55
HMGA1P17096 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC-0.86□□□□□ -2.55
HMGA1P17096 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC-0.86□□□□□ -2.55
HMGA1P17096 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.87□□□□□ -2.55
HMGA1P17096 Y_RNA.256-201ENST00000364594 104 ntBASIC-0.87□□□□□ -2.55
HMGA1P17096 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.87□□□□□ -2.55
HMGA1P17096 SNORD116-20-201ENST00000384529 92 ntBASIC-0.87□□□□□ -2.55
HMGA1P17096 MIR660-201ENST00000385235 97 ntBASIC-0.87□□□□□ -2.55
HMGA1P17096 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC-0.87□□□□□ -2.55
HMGA1P17096 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC-0.87□□□□□ -2.55
HMGA1P17096 DPRXP1-201ENST00000426312 460 ntBASIC-0.87□□□□□ -2.55
HMGA1P17096 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC-0.87□□□□□ -2.55
HMGA1P17096 AC114982.2-201ENST00000461396 358 ntBASIC-0.87□□□□□ -2.55
HMGA1P17096 MIR4432-201ENST00000581823 84 ntBASIC-0.87□□□□□ -2.55
HMGA1P17096 AL606834.3-201ENST00000602615 496 ntBASIC-0.87□□□□□ -2.55
HMGA1P17096 AC004832.4-201ENST00000608952 331 ntBASIC-0.87□□□□□ -2.55
HMGA1P17096 SGO1P1-201ENST00000603525 1447 ntBASIC-0.88□□□□□ -2.55
HMGA1P17096 MIR412-201ENST00000362142 91 ntBASIC-0.88□□□□□ -2.55
HMGA1P17096 MIR16-1-201ENST00000385271 89 ntBASIC-0.88□□□□□ -2.55
HMGA1P17096 AL136310.1-201ENST00000404926 654 ntBASIC-0.88□□□□□ -2.55
HMGA1P17096 AL356583.2-201ENST00000426536 280 ntBASIC-0.88□□□□□ -2.55
HMGA1P17096 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC-0.88□□□□□ -2.55
HMGA1P17096 snoU109.2-201ENST00000459316 135 ntBASIC-0.88□□□□□ -2.55
HMGA1P17096 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC-0.88□□□□□ -2.55
HMGA1P17096 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC-0.88□□□□□ -2.55
HMGA1P17096 RNU6-1278P-201ENST00000516130 107 ntBASIC-0.88□□□□□ -2.55
HMGA1P17096 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC-0.88□□□□□ -2.55
HMGA1P17096 MIR548AX-201ENST00000580117 73 ntBASIC-0.88□□□□□ -2.55
HMGA1P17096 AL355297.3-201ENST00000604082 446 ntBASIC-0.88□□□□□ -2.55
HMGA1P17096 AL354696.1-201ENST00000614652 497 ntBASIC-0.88□□□□□ -2.55
HMGA1P17096 Y_RNA.234-201ENST00000364409 97 ntBASIC-0.89□□□□□ -2.55
HMGA1P17096 RNU6-619P-201ENST00000365146 108 ntBASIC-0.89□□□□□ -2.55
HMGA1P17096 SNORA2.2-201ENST00000365473 135 ntBASIC-0.89□□□□□ -2.55
HMGA1P17096 Y_RNA.416-201ENST00000384014 113 ntBASIC-0.89□□□□□ -2.55
HMGA1P17096 SNORA12.1-201ENST00000390873 148 ntBASIC-0.89□□□□□ -2.55
HMGA1P17096 RNU6-932P-201ENST00000391108 106 ntBASIC-0.89□□□□□ -2.55
HMGA1P17096 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC-0.89□□□□□ -2.55
HMGA1P17096 MRPS10P2-201ENST00000431226 381 ntBASIC-0.89□□□□□ -2.55
HMGA1P17096 MTCO2P7-201ENST00000446518 666 ntBASIC-0.89□□□□□ -2.55
HMGA1P17096 OFD1P3Y-201ENST00000453312 783 ntBASIC-0.89□□□□□ -2.55
HMGA1P17096 RNU7-165P-201ENST00000458864 60 ntBASIC-0.89□□□□□ -2.55
HMGA1P17096 RNU6-1037P-201ENST00000459571 107 ntBASIC-0.89□□□□□ -2.55
HMGA1P17096 OR8K2P-201ENST00000524645 927 ntBASIC-0.89□□□□□ -2.55
HMGA1P17096 AL390123.1-201ENST00000603216 237 ntBASIC-0.89□□□□□ -2.55
HMGA1P17096 AL121992.2-201ENST00000606262 256 ntBASIC-0.89□□□□□ -2.55
HMGA1P17096 RNU6-28P-201ENST00000362378 107 ntBASIC-0.9□□□□□ -2.55
HMGA1P17096 RNU6-480P-201ENST00000384332 107 ntBASIC-0.9□□□□□ -2.55
HMGA1P17096 MIR153-2-201ENST00000385225 87 ntBASIC-0.9□□□□□ -2.55
HMGA1P17096 MIR760-201ENST00000390220 80 ntBASIC-0.9□□□□□ -2.55
HMGA1P17096 RNA5SP163-201ENST00000410304 99 ntBASIC-0.9□□□□□ -2.55
HMGA1P17096 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC-0.9□□□□□ -2.55
HMGA1P17096 MTND1P21-201ENST00000412991 285 ntBASIC-0.9□□□□□ -2.55
HMGA1P17096 MTCO1P20-201ENST00000425366 358 ntBASIC-0.9□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms