Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 AC107222.1-201ENST00000510899 637 ntBASIC2.39□□□□□ -2.03
PCNAP12004 RNA5SP320-201ENST00000516263 124 ntBASIC2.39□□□□□ -2.03
PCNAP12004 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.39□□□□□ -2.03
PCNAP12004 EIF4A1P12-201ENST00000551910 141 ntBASIC2.39□□□□□ -2.03
PCNAP12004 AC090517.1-201ENST00000569307 266 ntBASIC2.39□□□□□ -2.03
PCNAP12004 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.39□□□□□ -2.03
PCNAP12004 AC100812.1-201ENST00000607622 580 ntBASIC2.39□□□□□ -2.03
PCNAP12004 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.39□□□□□ -2.03
PCNAP12004 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.39□□□□□ -2.03
PCNAP12004 uc_338.22-201ENST00000622722 187 ntBASIC2.39□□□□□ -2.03
PCNAP12004 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
PCNAP12004 ZNF204P-201ENST00000416749 2397 ntBASIC2.38□□□□□ -2.03
PCNAP12004 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
PCNAP12004 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
PCNAP12004 Y_RNA.314-201ENST00000365114 102 ntBASIC2.38□□□□□ -2.03
PCNAP12004 Y_RNA.319-201ENST00000365138 92 ntBASIC2.38□□□□□ -2.03
PCNAP12004 SNORA18.2-201ENST00000383865 132 ntBASIC2.38□□□□□ -2.03
PCNAP12004 MIR27B-201ENST00000385129 97 ntBASIC2.38□□□□□ -2.03
PCNAP12004 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
PCNAP12004 RNU2-32P-201ENST00000411193 191 ntBASIC2.38□□□□□ -2.03
PCNAP12004 RPS26P42-201ENST00000413485 326 ntBASIC2.38□□□□□ -2.03
PCNAP12004 AC007098.1-201ENST00000420122 367 ntBASIC2.38□□□□□ -2.03
PCNAP12004 AC027124.2-201ENST00000428249 105 ntBASIC2.38□□□□□ -2.03
PCNAP12004 AC108938.1-201ENST00000451204 136 ntBASIC2.38□□□□□ -2.03
PCNAP12004 CYP2C59P-201ENST00000457790 269 ntBASIC2.38□□□□□ -2.03
PCNAP12004 Y_RNA.639-201ENST00000458981 102 ntBASIC2.38□□□□□ -2.03
PCNAP12004 MTND5P16-201ENST00000460269 1703 ntBASIC2.38□□□□□ -2.03
PCNAP12004 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.38□□□□□ -2.03
PCNAP12004 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.38□□□□□ -2.03
PCNAP12004 AC087588.2-201ENST00000617667 426 ntBASIC2.38□□□□□ -2.03
PCNAP12004 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
PCNAP12004 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.38□□□□□ -2.03
PCNAP12004 ZNF72P-201ENST00000425869 1908 ntBASIC2.37□□□□□ -2.03
PCNAP12004 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.37□□□□□ -2.03
PCNAP12004 RNA5SP456-201ENST00000364002 114 ntBASIC2.37□□□□□ -2.03
PCNAP12004 RNU6-743P-201ENST00000364151 106 ntBASIC2.37□□□□□ -2.03
PCNAP12004 Y_RNA.358-201ENST00000365491 99 ntBASIC2.37□□□□□ -2.03
PCNAP12004 Y_RNA.445-201ENST00000384168 102 ntBASIC2.37□□□□□ -2.03
PCNAP12004 RNU6-541P-201ENST00000384709 110 ntBASIC2.37□□□□□ -2.03
PCNAP12004 Y_RNA.577-201ENST00000384794 101 ntBASIC2.37□□□□□ -2.03
PCNAP12004 AC004866.1-201ENST00000411748 78 ntBASIC2.37□□□□□ -2.03
PCNAP12004 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.37□□□□□ -2.03
PCNAP12004 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.37□□□□□ -2.03
PCNAP12004 AL137792.2-201ENST00000443484 235 ntBASIC2.37□□□□□ -2.03
PCNAP12004 CHEK2P4-201ENST00000450340 246 ntBASIC2.37□□□□□ -2.03
PCNAP12004 AL109933.2-201ENST00000452651 260 ntBASIC2.37□□□□□ -2.03
PCNAP12004 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.37□□□□□ -2.03
PCNAP12004 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.37□□□□□ -2.03
PCNAP12004 AC107032.1-201ENST00000485945 480 ntBASIC2.37□□□□□ -2.03
PCNAP12004 AC018868.1-201ENST00000491307 315 ntBASIC2.37□□□□□ -2.03
PCNAP12004 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.37□□□□□ -2.03
PCNAP12004 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.37□□□□□ -2.03
PCNAP12004 SNORA48.11-201ENST00000517015 89 ntBASIC2.37□□□□□ -2.03
PCNAP12004 RNU6-58P-201ENST00000517143 103 ntBASIC2.37□□□□□ -2.03
PCNAP12004 CYCSP26-201ENST00000534107 320 ntBASIC2.37□□□□□ -2.03
PCNAP12004 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.37□□□□□ -2.03
PCNAP12004 AC044792.1-201ENST00000593294 196 ntBASIC2.37□□□□□ -2.03
PCNAP12004 MIR1248-201ENST00000629190 106 ntBASIC2.37□□□□□ -2.03
PCNAP12004 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.37□□□□□ -2.03
PCNAP12004 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
PCNAP12004 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
PCNAP12004 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
PCNAP12004 Y_RNA.216-201ENST00000364205 93 ntBASIC2.36□□□□□ -2.03
PCNAP12004 RNA5SP240-201ENST00000365355 128 ntBASIC2.36□□□□□ -2.03
PCNAP12004 Y_RNA.395-201ENST00000383945 109 ntBASIC2.36□□□□□ -2.03
PCNAP12004 NDUFB4P4-201ENST00000404822 243 ntBASIC2.36□□□□□ -2.03
PCNAP12004 WARS2P1-201ENST00000429678 537 ntBASIC2.36□□□□□ -2.03
PCNAP12004 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.36□□□□□ -2.03
PCNAP12004 MTCO3P8-201ENST00000453691 755 ntBASIC2.36□□□□□ -2.03
PCNAP12004 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.36□□□□□ -2.03
PCNAP12004 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.36□□□□□ -2.03
PCNAP12004 MIR6817-201ENST00000615588 66 ntBASIC2.36□□□□□ -2.03
PCNAP12004 AC007485.1-201ENST00000616755 206 ntBASIC2.36□□□□□ -2.03
PCNAP12004 AC137590.2-201ENST00000619709 240 ntBASIC2.36□□□□□ -2.03
PCNAP12004 U4.3-201ENST00000621047 82 ntBASIC2.36□□□□□ -2.03
PCNAP12004 AC012640.5-201ENST00000623897 319 ntBASIC2.36□□□□□ -2.03
PCNAP12004 AC131280.1-202ENST00000624067 4211 ntBASIC2.36□□□□□ -2.03
PCNAP12004 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
PCNAP12004 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
PCNAP12004 RNU1-51P-201ENST00000365345 176 ntBASIC2.35□□□□□ -2.03
PCNAP12004 RNU6-546P-201ENST00000383991 107 ntBASIC2.35□□□□□ -2.03
PCNAP12004 Y_RNA.428-201ENST00000384078 102 ntBASIC2.35□□□□□ -2.03
PCNAP12004 Y_RNA.557-201ENST00000384680 107 ntBASIC2.35□□□□□ -2.03
PCNAP12004 MIR625-201ENST00000385047 85 ntBASIC2.35□□□□□ -2.03
PCNAP12004 USP9YP16-201ENST00000430287 407 ntBASIC2.35□□□□□ -2.03
PCNAP12004 AL035666.1-201ENST00000446195 348 ntBASIC2.35□□□□□ -2.03
PCNAP12004 USP9YP23-201ENST00000455085 407 ntBASIC2.35□□□□□ -2.03
PCNAP12004 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.35□□□□□ -2.03
PCNAP12004 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.35□□□□□ -2.03
PCNAP12004 RNU6-976P-201ENST00000516086 111 ntBASIC2.35□□□□□ -2.03
PCNAP12004 RNA5SP148-201ENST00000516527 94 ntBASIC2.35□□□□□ -2.03
PCNAP12004 SNORD116.3-201ENST00000517176 78 ntBASIC2.35□□□□□ -2.03
PCNAP12004 MIR5695-201ENST00000579717 85 ntBASIC2.35□□□□□ -2.03
PCNAP12004 CYP2C61P-201ENST00000604072 290 ntBASIC2.35□□□□□ -2.03
PCNAP12004 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.35□□□□□ -2.03
PCNAP12004 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.35□□□□□ -2.03
PCNAP12004 Y_RNA.80-201ENST00000362996 102 ntBASIC2.34□□□□□ -2.03
PCNAP12004 RNU6-525P-201ENST00000363685 104 ntBASIC2.34□□□□□ -2.03
PCNAP12004 RNU6-873P-201ENST00000363833 107 ntBASIC2.34□□□□□ -2.03
PCNAP12004 RNA5SP68-201ENST00000363885 119 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms