Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC0.42□□□□□ -2.34
CTSDP07339 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.42□□□□□ -2.34
CTSDP07339 MIR6734-201ENST00000621166 68 ntBASIC0.42□□□□□ -2.34
CTSDP07339 AC009878.1-201ENST00000621819 340 ntBASIC0.42□□□□□ -2.34
CTSDP07339 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.42□□□□□ -2.34
CTSDP07339 U6.114-201ENST00000636407 96 ntBASIC0.42□□□□□ -2.34
CTSDP07339 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
CTSDP07339 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.41□□□□□ -2.34
CTSDP07339 RNA5SP361-201ENST00000362686 118 ntBASIC0.41□□□□□ -2.34
CTSDP07339 SNORD18A-201ENST00000363753 72 ntBASIC0.41□□□□□ -2.34
CTSDP07339 RNU6-501P-201ENST00000364072 100 ntBASIC0.41□□□□□ -2.34
CTSDP07339 SNORA20.2-201ENST00000383922 131 ntBASIC0.41□□□□□ -2.34
CTSDP07339 RNU6-1200P-201ENST00000384162 107 ntBASIC0.41□□□□□ -2.34
CTSDP07339 RNA5SP323-201ENST00000391094 133 ntBASIC0.41□□□□□ -2.34
CTSDP07339 RNU6-1093P-201ENST00000391194 107 ntBASIC0.41□□□□□ -2.34
CTSDP07339 MIR942-201ENST00000401111 86 ntBASIC0.41□□□□□ -2.34
CTSDP07339 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.41□□□□□ -2.34
CTSDP07339 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.41□□□□□ -2.34
CTSDP07339 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.41□□□□□ -2.34
CTSDP07339 CETN4P-201ENST00000432407 469 ntBASIC0.41□□□□□ -2.34
CTSDP07339 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.41□□□□□ -2.34
CTSDP07339 AL031274.1-201ENST00000450334 232 ntBASIC0.41□□□□□ -2.34
CTSDP07339 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
CTSDP07339 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.41□□□□□ -2.34
CTSDP07339 MTCO3P7-201ENST00000510008 774 ntBASIC0.41□□□□□ -2.34
CTSDP07339 RNU6-922P-201ENST00000516753 99 ntBASIC0.41□□□□□ -2.34
CTSDP07339 DEFB131C-201ENST00000528817 165 ntBASIC0.41□□□□□ -2.34
CTSDP07339 MIR4509-3-201ENST00000578671 94 ntBASIC0.41□□□□□ -2.34
CTSDP07339 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC0.41□□□□□ -2.34
CTSDP07339 MIR4509-2-201ENST00000583920 94 ntBASIC0.41□□□□□ -2.34
CTSDP07339 AP001836.1-201ENST00000604675 523 ntBASIC0.41□□□□□ -2.34
CTSDP07339 AC018714.1-201ENST00000605028 208 ntBASIC0.41□□□□□ -2.34
CTSDP07339 MIR4509-1-201ENST00000618224 94 ntBASIC0.41□□□□□ -2.34
CTSDP07339 SNORD3E-202ENST00000627253 216 ntBASIC0.41□□□□□ -2.34
CTSDP07339 SNORA43.4-201ENST00000629559 138 ntBASIC0.41□□□□□ -2.34
CTSDP07339 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
CTSDP07339 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.4□□□□□ -2.35
CTSDP07339 RNU6-1287P-201ENST00000362914 107 ntBASIC0.4□□□□□ -2.35
CTSDP07339 RNU6-969P-201ENST00000383900 105 ntBASIC0.4□□□□□ -2.35
CTSDP07339 RNU6-975P-201ENST00000384296 105 ntBASIC0.4□□□□□ -2.35
CTSDP07339 Y_RNA.480-201ENST00000384364 102 ntBASIC0.4□□□□□ -2.35
CTSDP07339 RNU6-505P-201ENST00000384427 107 ntBASIC0.4□□□□□ -2.35
CTSDP07339 SNORA80D-201ENST00000384488 135 ntBASIC0.4□□□□□ -2.35
CTSDP07339 RNU6-1060P-201ENST00000384664 107 ntBASIC0.4□□□□□ -2.35
CTSDP07339 RNU6-906P-201ENST00000384700 70 ntBASIC0.4□□□□□ -2.35
CTSDP07339 RNU6-417P-201ENST00000384712 107 ntBASIC0.4□□□□□ -2.35
CTSDP07339 AF228730.1-201ENST00000397972 663 ntBASIC0.4□□□□□ -2.35
CTSDP07339 RN7SKP200-201ENST00000410564 320 ntBASIC0.4□□□□□ -2.35
CTSDP07339 AC010154.1-201ENST00000425857 269 ntBASIC0.4□□□□□ -2.35
CTSDP07339 AL365184.2-201ENST00000431139 435 ntBASIC0.4□□□□□ -2.35
CTSDP07339 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC0.4□□□□□ -2.35
CTSDP07339 AC016717.1-201ENST00000448918 286 ntBASIC0.4□□□□□ -2.35
CTSDP07339 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.4□□□□□ -2.35
CTSDP07339 RPS26P48-201ENST00000491713 339 ntBASIC0.4□□□□□ -2.35
CTSDP07339 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC0.4□□□□□ -2.35
CTSDP07339 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.4□□□□□ -2.35
CTSDP07339 Y_RNA.672-201ENST00000516289 104 ntBASIC0.4□□□□□ -2.35
CTSDP07339 SNORA31.10-201ENST00000516482 106 ntBASIC0.4□□□□□ -2.35
CTSDP07339 RNU6-1220P-201ENST00000517126 108 ntBASIC0.4□□□□□ -2.35
CTSDP07339 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.4□□□□□ -2.35
CTSDP07339 AL390123.1-201ENST00000603216 237 ntBASIC0.4□□□□□ -2.35
CTSDP07339 AC104458.1-201ENST00000608243 463 ntBASIC0.4□□□□□ -2.35
CTSDP07339 AC009159.2-201ENST00000617603 606 ntBASIC0.4□□□□□ -2.35
CTSDP07339 AL049777.1-201ENST00000622740 518 ntBASIC0.4□□□□□ -2.35
CTSDP07339 AC011155.2-201ENST00000623202 216 ntBASIC0.4□□□□□ -2.35
CTSDP07339 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
CTSDP07339 RNA5SP347-201ENST00000362445 119 ntBASIC0.39□□□□□ -2.35
CTSDP07339 Y_RNA.287-201ENST00000364853 94 ntBASIC0.39□□□□□ -2.35
CTSDP07339 RNU6-827P-201ENST00000365553 106 ntBASIC0.39□□□□□ -2.35
CTSDP07339 RNU6-110P-201ENST00000384508 104 ntBASIC0.39□□□□□ -2.35
CTSDP07339 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC0.39□□□□□ -2.35
CTSDP07339 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.39□□□□□ -2.35
CTSDP07339 MTCO3P18-201ENST00000440206 761 ntBASIC0.39□□□□□ -2.35
CTSDP07339 AL606517.2-201ENST00000442855 241 ntBASIC0.39□□□□□ -2.35
CTSDP07339 BET1P1-201ENST00000482276 359 ntBASIC0.39□□□□□ -2.35
CTSDP07339 COX6CP6-201ENST00000490840 228 ntBASIC0.39□□□□□ -2.35
CTSDP07339 AC091951.3-201ENST00000504093 246 ntBASIC0.39□□□□□ -2.35
CTSDP07339 AC079140.5-201ENST00000507882 310 ntBASIC0.39□□□□□ -2.35
CTSDP07339 RNA5SP255-201ENST00000516370 107 ntBASIC0.39□□□□□ -2.35
CTSDP07339 AC103996.1-201ENST00000555468 102 ntBASIC0.39□□□□□ -2.35
CTSDP07339 AL391840.1-201ENST00000571144 367 ntBASIC0.39□□□□□ -2.35
CTSDP07339 MIR4999-201ENST00000585029 91 ntBASIC0.39□□□□□ -2.35
CTSDP07339 Z99497.2-201ENST00000603634 310 ntBASIC0.39□□□□□ -2.35
CTSDP07339 AC104465.1-201ENST00000611365 139 ntBASIC0.39□□□□□ -2.35
CTSDP07339 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC0.39□□□□□ -2.35
CTSDP07339 AC005562.2-201ENST00000618264 111 ntBASIC0.39□□□□□ -2.35
CTSDP07339 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.39□□□□□ -2.35
CTSDP07339 AL513423.1-201ENST00000621695 132 ntBASIC0.39□□□□□ -2.35
CTSDP07339 AC006001.4-201ENST00000622243 395 ntBASIC0.39□□□□□ -2.35
CTSDP07339 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.39□□□□□ -2.35
CTSDP07339 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
CTSDP07339 Y_RNA.116-201ENST00000363292 103 ntBASIC0.38□□□□□ -2.35
CTSDP07339 RNU6-169P-201ENST00000365336 107 ntBASIC0.38□□□□□ -2.35
CTSDP07339 RNU6-42P-201ENST00000384165 107 ntBASIC0.38□□□□□ -2.35
CTSDP07339 MIR549A-201ENST00000385268 96 ntBASIC0.38□□□□□ -2.35
CTSDP07339 RNA5SP467-201ENST00000391274 118 ntBASIC0.38□□□□□ -2.35
CTSDP07339 MIR1253-201ENST00000408273 105 ntBASIC0.38□□□□□ -2.35
CTSDP07339 MTCO2P23-201ENST00000425216 680 ntBASIC0.38□□□□□ -2.35
CTSDP07339 TIMM9P3-201ENST00000428659 274 ntBASIC0.38□□□□□ -2.35
CTSDP07339 AL162395.1-201ENST00000457882 422 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms