Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 U2.20-201ENST00000613956 192 ntBASIC1.91□□□□□ -2.1
APOA4P06727 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.91□□□□□ -2.1
APOA4P06727 U2.9-201ENST00000615427 191 ntBASIC1.91□□□□□ -2.1
APOA4P06727 U2.11-201ENST00000616345 191 ntBASIC1.91□□□□□ -2.1
APOA4P06727 U2.2-201ENST00000616535 191 ntBASIC1.91□□□□□ -2.1
APOA4P06727 U2.3-201ENST00000617785 191 ntBASIC1.91□□□□□ -2.1
APOA4P06727 U2.19-201ENST00000618602 191 ntBASIC1.91□□□□□ -2.1
APOA4P06727 RNU2-1-201ENST00000618664 191 ntBASIC1.91□□□□□ -2.1
APOA4P06727 U2.6-201ENST00000619225 191 ntBASIC1.91□□□□□ -2.1
APOA4P06727 U2.5-201ENST00000619465 191 ntBASIC1.91□□□□□ -2.1
APOA4P06727 U2.10-201ENST00000620268 191 ntBASIC1.91□□□□□ -2.1
APOA4P06727 AC024614.3-201ENST00000637860 256 ntBASIC1.91□□□□□ -2.1
APOA4P06727 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.9□□□□□ -2.1
APOA4P06727 Y_RNA.151-201ENST00000363566 112 ntBASIC1.9□□□□□ -2.11
APOA4P06727 RNU6-418P-201ENST00000384035 107 ntBASIC1.9□□□□□ -2.11
APOA4P06727 RNU6-790P-201ENST00000384479 105 ntBASIC1.9□□□□□ -2.11
APOA4P06727 RNU6-95P-201ENST00000384697 107 ntBASIC1.9□□□□□ -2.11
APOA4P06727 RPL21P111-201ENST00000418453 477 ntBASIC1.9□□□□□ -2.11
APOA4P06727 RPL31P63-201ENST00000422565 375 ntBASIC1.9□□□□□ -2.11
APOA4P06727 AC099677.2-201ENST00000436385 175 ntBASIC1.9□□□□□ -2.11
APOA4P06727 AL353572.1-201ENST00000442490 417 ntBASIC1.9□□□□□ -2.11
APOA4P06727 AC009237.7-201ENST00000447357 229 ntBASIC1.9□□□□□ -2.11
APOA4P06727 PCMTD1P1-201ENST00000455560 355 ntBASIC1.9□□□□□ -2.11
APOA4P06727 MTND1P11-201ENST00000456661 876 ntBASIC1.9□□□□□ -2.11
APOA4P06727 RNU6-256P-201ENST00000516747 97 ntBASIC1.9□□□□□ -2.11
APOA4P06727 EIF1P4-201ENST00000572664 335 ntBASIC1.9□□□□□ -2.11
APOA4P06727 SNRPGP20-201ENST00000604477 205 ntBASIC1.9□□□□□ -2.11
APOA4P06727 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.9□□□□□ -2.11
APOA4P06727 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
APOA4P06727 Y_RNA.9-201ENST00000362354 101 ntBASIC1.89□□□□□ -2.11
APOA4P06727 SNORD50.1-201ENST00000362987 71 ntBASIC1.89□□□□□ -2.11
APOA4P06727 RNU6-296P-201ENST00000384608 107 ntBASIC1.89□□□□□ -2.11
APOA4P06727 MIR934-201ENST00000401241 83 ntBASIC1.89□□□□□ -2.11
APOA4P06727 MTCO3P8-201ENST00000453691 755 ntBASIC1.89□□□□□ -2.11
APOA4P06727 RNU1-41P-201ENST00000516161 162 ntBASIC1.89□□□□□ -2.11
APOA4P06727 RNU6-720P-201ENST00000516363 108 ntBASIC1.89□□□□□ -2.11
APOA4P06727 RNU1-48P-201ENST00000516400 162 ntBASIC1.89□□□□□ -2.11
APOA4P06727 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.89□□□□□ -2.11
APOA4P06727 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.89□□□□□ -2.11
APOA4P06727 AC012493.3-201ENST00000604494 112 ntBASIC1.89□□□□□ -2.11
APOA4P06727 AC069114.2-201ENST00000604699 304 ntBASIC1.89□□□□□ -2.11
APOA4P06727 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.89□□□□□ -2.11
APOA4P06727 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
APOA4P06727 MTND4P5-201ENST00000435821 1374 ntBASIC1.88□□□□□ -2.11
APOA4P06727 RNU6-862P-201ENST00000362804 105 ntBASIC1.88□□□□□ -2.11
APOA4P06727 Y_RNA.135-201ENST00000363439 95 ntBASIC1.88□□□□□ -2.11
APOA4P06727 RNY4P14-201ENST00000363656 96 ntBASIC1.88□□□□□ -2.11
APOA4P06727 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
APOA4P06727 Y_RNA.414-201ENST00000384011 101 ntBASIC1.88□□□□□ -2.11
APOA4P06727 RNU6-439P-201ENST00000384188 106 ntBASIC1.88□□□□□ -2.11
APOA4P06727 MIR549A-201ENST00000385268 96 ntBASIC1.88□□□□□ -2.11
APOA4P06727 RNU6-373P-201ENST00000411247 98 ntBASIC1.88□□□□□ -2.11
APOA4P06727 AL590632.1-201ENST00000424289 371 ntBASIC1.88□□□□□ -2.11
APOA4P06727 AC079354.2-201ENST00000453523 154 ntBASIC1.88□□□□□ -2.11
APOA4P06727 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.88□□□□□ -2.11
APOA4P06727 CBX3P4-201ENST00000538909 354 ntBASIC1.88□□□□□ -2.11
APOA4P06727 RRN3P3-201ENST00000549207 578 ntBASIC1.88□□□□□ -2.11
APOA4P06727 HSBP1P1-201ENST00000555205 166 ntBASIC1.88□□□□□ -2.11
APOA4P06727 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.88□□□□□ -2.11
APOA4P06727 TPRKBP2-201ENST00000565969 475 ntBASIC1.88□□□□□ -2.11
APOA4P06727 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.88□□□□□ -2.11
APOA4P06727 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.88□□□□□ -2.11
APOA4P06727 AC023043.2-201ENST00000589678 1026 ntBASIC1.88□□□□□ -2.11
APOA4P06727 AC012557.2-201ENST00000605919 418 ntBASIC1.88□□□□□ -2.11
APOA4P06727 AC093783.1-201ENST00000612976 329 ntBASIC1.88□□□□□ -2.11
APOA4P06727 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.88□□□□□ -2.11
APOA4P06727 SCARNA4-201ENST00000629045 128 ntBASIC1.88□□□□□ -2.11
APOA4P06727 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.88□□□□□ -2.11
APOA4P06727 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.88□□□□□ -2.11
APOA4P06727 BX322639.1-202ENST00000423987 2213 ntBASIC1.87□□□□□ -2.11
APOA4P06727 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.87□□□□□ -2.11
APOA4P06727 SNORD114-1-201ENST00000362705 72 ntBASIC1.87□□□□□ -2.11
APOA4P06727 Y_RNA.318-201ENST00000365131 97 ntBASIC1.87□□□□□ -2.11
APOA4P06727 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
APOA4P06727 AL079342.1-201ENST00000401460 267 ntBASIC1.87□□□□□ -2.11
APOA4P06727 MIR320B2-201ENST00000408479 138 ntBASIC1.87□□□□□ -2.11
APOA4P06727 RNU2-20P-201ENST00000410425 191 ntBASIC1.87□□□□□ -2.11
APOA4P06727 AC004866.1-201ENST00000411748 78 ntBASIC1.87□□□□□ -2.11
APOA4P06727 AC060773.1-201ENST00000421698 310 ntBASIC1.87□□□□□ -2.11
APOA4P06727 AL358453.1-201ENST00000422522 250 ntBASIC1.87□□□□□ -2.11
APOA4P06727 AL445685.2-201ENST00000422551 342 ntBASIC1.87□□□□□ -2.11
APOA4P06727 HMGB1P18-201ENST00000438801 619 ntBASIC1.87□□□□□ -2.11
APOA4P06727 DAP3P1-201ENST00000441522 278 ntBASIC1.87□□□□□ -2.11
APOA4P06727 NFU1P2-201ENST00000448700 469 ntBASIC1.87□□□□□ -2.11
APOA4P06727 AC114982.1-201ENST00000469402 321 ntBASIC1.87□□□□□ -2.11
APOA4P06727 MTCO2P30-201ENST00000503662 364 ntBASIC1.87□□□□□ -2.11
APOA4P06727 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.87□□□□□ -2.11
APOA4P06727 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.87□□□□□ -2.11
APOA4P06727 SNORA59B-202ENST00000578183 701 ntBASIC1.87□□□□□ -2.11
APOA4P06727 MIR3672-201ENST00000584290 82 ntBASIC1.87□□□□□ -2.11
APOA4P06727 SNRPGP19-201ENST00000603826 189 ntBASIC1.87□□□□□ -2.11
APOA4P06727 MIR8074-201ENST00000615081 81 ntBASIC1.87□□□□□ -2.11
APOA4P06727 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.87□□□□□ -2.11
APOA4P06727 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
APOA4P06727 MIR424-201ENST00000362227 98 ntBASIC1.86□□□□□ -2.11
APOA4P06727 SNORA16.1-201ENST00000364597 132 ntBASIC1.86□□□□□ -2.11
APOA4P06727 U8.10-201ENST00000384260 133 ntBASIC1.86□□□□□ -2.11
APOA4P06727 RNU6-975P-201ENST00000384296 105 ntBASIC1.86□□□□□ -2.11
APOA4P06727 RNU6-1235P-201ENST00000384559 107 ntBASIC1.86□□□□□ -2.11
APOA4P06727 Y_RNA.554-201ENST00000384672 102 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms