| MT1A | P04731 | AC025524.2-211 | ENST00000519990 | 1173 nt | TSL 1 (best) BASIC | -0.57 | □□□□□ -2.5 | | |
| MT1A | P04731 | EBAG9-207 | ENST00000531677 | 777 nt | TSL 1 (best) BASIC | -0.57 | □□□□□ -2.5 | | |
| MT1A | P04731 | AC004584.2-201 | ENST00000570407 | 410 nt | BASIC | -0.57 | □□□□□ -2.5 | | |
| MT1A | P04731 | MIR3165-201 | ENST00000579874 | 75 nt | BASIC | -0.57 | □□□□□ -2.5 | | |
| MT1A | P04731 | LINC01899-202 | ENST00000583756 | 575 nt | TSL 3 BASIC | -0.57 | □□□□□ -2.5 | | |
| MT1A | P04731 | SNORD39.3-201 | ENST00000584451 | 71 nt | BASIC | -0.57 | □□□□□ -2.5 | | |
| MT1A | P04731 | AC131159.1-201 | ENST00000621854 | 213 nt | BASIC | -0.57 | □□□□□ -2.5 | | |
| MT1A | P04731 | RNU5E-8P-201 | ENST00000363502 | 116 nt | BASIC | -0.58 | □□□□□ -2.5 | | |
| MT1A | P04731 | TSHB-202 | ENST00000369517 | 474 nt | APPRIS P1 TSL 1 (best) BASIC | -0.58 | □□□□□ -2.5 | | |
| MT1A | P04731 | RNU6-187P-201 | ENST00000384139 | 106 nt | BASIC | -0.58 | □□□□□ -2.5 | | |
| MT1A | P04731 | Y_RNA.453-201 | ENST00000384223 | 109 nt | BASIC | -0.58 | □□□□□ -2.5 | | |
| MT1A | P04731 | Y_RNA.555-201 | ENST00000384673 | 110 nt | BASIC | -0.58 | □□□□□ -2.5 | | |
| MT1A | P04731 | FCF1P10-201 | ENST00000407590 | 479 nt | BASIC | -0.58 | □□□□□ -2.5 | | |
| MT1A | P04731 | RNU2-3P-201 | ENST00000410144 | 191 nt | BASIC | -0.58 | □□□□□ -2.5 | | |
| MT1A | P04731 | MTCO3P41-201 | ENST00000414801 | 328 nt | BASIC | -0.58 | □□□□□ -2.5 | | |
| MT1A | P04731 | AC104777.1-203 | ENST00000423428 | 554 nt | TSL 3 BASIC | -0.58 | □□□□□ -2.5 | | |
| MT1A | P04731 | PSMA6P3-201 | ENST00000428242 | 164 nt | BASIC | -0.58 | □□□□□ -2.5 | | |
| MT1A | P04731 | LARP1BP3-201 | ENST00000437229 | 869 nt | BASIC | -0.58 | □□□□□ -2.5 | | |
| MT1A | P04731 | LINC00446-202 | ENST00000438327 | 357 nt | TSL 3 BASIC | -0.58 | □□□□□ -2.5 | | |
| MT1A | P04731 | AC079354.2-201 | ENST00000453523 | 154 nt | BASIC | -0.58 | □□□□□ -2.5 | | |
| MT1A | P04731 | TPT1P7-201 | ENST00000458300 | 517 nt | BASIC | -0.58 | □□□□□ -2.5 | | |
| MT1A | P04731 | LINC01218-201 | ENST00000515150 | 481 nt | TSL 3 BASIC | -0.58 | □□□□□ -2.5 | | |
| MT1A | P04731 | RNU6-897P-201 | ENST00000517135 | 105 nt | BASIC | -0.58 | □□□□□ -2.5 | | |
| MT1A | P04731 | AP003716.2-201 | ENST00000528260 | 108 nt | BASIC | -0.58 | □□□□□ -2.5 | | |
| MT1A | P04731 | AC023442.1-201 | ENST00000531247 | 422 nt | BASIC | -0.58 | □□□□□ -2.5 | | |
| MT1A | P04731 | AC013828.2-201 | ENST00000532487 | 235 nt | BASIC | -0.58 | □□□□□ -2.5 | | |
| MT1A | P04731 | CCDC7-209 | ENST00000539197 | 581 nt | APPRIS ALT2 TSL 1 (best) BASIC | -0.58 | □□□□□ -2.5 | | |
| MT1A | P04731 | AC004832.4-201 | ENST00000608952 | 331 nt | BASIC | -0.58 | □□□□□ -2.5 | | |
| MT1A | P04731 | AL627230.5-201 | ENST00000619807 | 58 nt | BASIC | -0.58 | □□□□□ -2.5 | | |
| MT1A | P04731 | AC006504.8-201 | ENST00000621046 | 635 nt | BASIC | -0.58 | □□□□□ -2.5 | | |
| MT1A | P04731 | AL356596.1-201 | ENST00000624230 | 379 nt | BASIC | -0.58 | □□□□□ -2.5 | | |
| MT1A | P04731 | RNU4-32P-201 | ENST00000363404 | 141 nt | BASIC | -0.59 | □□□□□ -2.5 | | |
| MT1A | P04731 | RNU6-652P-201 | ENST00000365488 | 107 nt | BASIC | -0.59 | □□□□□ -2.5 | | |
| MT1A | P04731 | RNU6-438P-201 | ENST00000365561 | 103 nt | BASIC | -0.59 | □□□□□ -2.5 | | |
| MT1A | P04731 | Y_RNA.457-201 | ENST00000384237 | 111 nt | BASIC | -0.59 | □□□□□ -2.5 | | |
| MT1A | P04731 | RNU6-1297P-201 | ENST00000384415 | 104 nt | BASIC | -0.59 | □□□□□ -2.5 | | |
| MT1A | P04731 | Y_RNA.495-201 | ENST00000384435 | 112 nt | BASIC | -0.59 | □□□□□ -2.5 | | |
| MT1A | P04731 | NPS-201 | ENST00000398023 | 270 nt | APPRIS P1 TSL 5 BASIC | -0.59 | □□□□□ -2.5 | | |
| MT1A | P04731 | AF124730.1-201 | ENST00000430001 | 327 nt | TSL 2 BASIC | -0.59 | □□□□□ -2.5 | | |
| MT1A | P04731 | GPM6BP2-201 | ENST00000432046 | 144 nt | BASIC | -0.59 | □□□□□ -2.5 | | |
| MT1A | P04731 | GPM6BP1-201 | ENST00000446387 | 144 nt | BASIC | -0.59 | □□□□□ -2.5 | | |
| MT1A | P04731 | AC044784.2-201 | ENST00000447297 | 366 nt | TSL 3 BASIC | -0.59 | □□□□□ -2.5 | | |
| MT1A | P04731 | AC107208.1-201 | ENST00000508265 | 519 nt | TSL 4 BASIC | -0.59 | □□□□□ -2.5 | | |
| MT1A | P04731 | AC093303.1-201 | ENST00000514549 | 295 nt | BASIC | -0.59 | □□□□□ -2.5 | | |
| MT1A | P04731 | SNORA31.10-201 | ENST00000516482 | 106 nt | BASIC | -0.59 | □□□□□ -2.5 | | |
| MT1A | P04731 | HIGD1AP6-201 | ENST00000521833 | 279 nt | BASIC | -0.59 | □□□□□ -2.5 | | |
| MT1A | P04731 | AL352984.1-201 | ENST00000556949 | 276 nt | TSL 3 BASIC | -0.59 | □□□□□ -2.5 | | |
| MT1A | P04731 | NAMPTP3-201 | ENST00000569273 | 224 nt | BASIC | -0.59 | □□□□□ -2.5 | | |
| MT1A | P04731 | AP001178.1-201 | ENST00000584679 | 268 nt | TSL 3 BASIC | -0.59 | □□□□□ -2.5 | | |
| MT1A | P04731 | AC018462.2-201 | ENST00000605375 | 395 nt | BASIC | -0.59 | □□□□□ -2.5 | | |
| MT1A | P04731 | LINC02033-202 | ENST00000623312 | 492 nt | TSL 3 BASIC | -0.59 | □□□□□ -2.5 | | |
| MT1A | P04731 | MIR4275-201 | ENST00000636486 | 87 nt | BASIC | -0.59 | □□□□□ -2.5 | | |
| MT1A | P04731 | RNA5SP192-201 | ENST00000364404 | 120 nt | BASIC | -0.6 | □□□□□ -2.51 | | |
| MT1A | P04731 | SNORA72.2-201 | ENST00000365028 | 127 nt | BASIC | -0.6 | □□□□□ -2.51 | | |
| MT1A | P04731 | RNU6-24P-201 | ENST00000384440 | 107 nt | BASIC | -0.6 | □□□□□ -2.51 | | |
| MT1A | P04731 | RNU6-878P-201 | ENST00000384578 | 110 nt | BASIC | -0.6 | □□□□□ -2.51 | | |
| MT1A | P04731 | MIR563-201 | ENST00000385080 | 79 nt | BASIC | -0.6 | □□□□□ -2.51 | | |
| MT1A | P04731 | MIR660-201 | ENST00000385235 | 97 nt | BASIC | -0.6 | □□□□□ -2.51 | | |
| MT1A | P04731 | MIR873-201 | ENST00000401120 | 77 nt | BASIC | -0.6 | □□□□□ -2.51 | | |
| MT1A | P04731 | MIR1185-1-201 | ENST00000408598 | 86 nt | BASIC | -0.6 | □□□□□ -2.51 | | |
| MT1A | P04731 | AL663109.1-201 | ENST00000411498 | 844 nt | BASIC | -0.6 | □□□□□ -2.51 | | |
| MT1A | P04731 | AC003985.1-201 | ENST00000414127 | 362 nt | TSL 3 BASIC | -0.6 | □□□□□ -2.51 | | |
| MT1A | P04731 | SNX3P1X-201 | ENST00000414887 | 175 nt | BASIC | -0.6 | □□□□□ -2.51 | | |
| MT1A | P04731 | MTCO1P21-201 | ENST00000416634 | 589 nt | BASIC | -0.6 | □□□□□ -2.51 | | |
| MT1A | P04731 | MTCO3P1-205 | ENST00000422088 | 832 nt | BASIC | -0.6 | □□□□□ -2.51 | | |
| MT1A | P04731 | AC133104.1-201 | ENST00000429100 | 218 nt | BASIC | -0.6 | □□□□□ -2.51 | | |
| MT1A | P04731 | AL139397.1-201 | ENST00000430456 | 644 nt | TSL 2 BASIC | -0.6 | □□□□□ -2.51 | | |
| MT1A | P04731 | AL157387.1-201 | ENST00000436077 | 335 nt | TSL 2 BASIC | -0.6 | □□□□□ -2.51 | | |
| MT1A | P04731 | AC093019.1-201 | ENST00000443135 | 252 nt | BASIC | -0.6 | □□□□□ -2.51 | | |
| MT1A | P04731 | AL354949.1-201 | ENST00000446438 | 170 nt | TSL 2 BASIC | -0.6 | □□□□□ -2.51 | | |
| MT1A | P04731 | AC092685.1-201 | ENST00000447960 | 1243 nt | BASIC | -0.6 | □□□□□ -2.51 | | |
| MT1A | P04731 | BTF3P15-201 | ENST00000455606 | 336 nt | BASIC | -0.6 | □□□□□ -2.51 | | |
| MT1A | P04731 | RPL39P34-201 | ENST00000477141 | 156 nt | BASIC | -0.6 | □□□□□ -2.51 | | |
| MT1A | P04731 | AC079943.1-201 | ENST00000491909 | 466 nt | TSL 3 BASIC | -0.6 | □□□□□ -2.51 | | |
| MT1A | P04731 | AC025459.1-201 | ENST00000504072 | 156 nt | BASIC | -0.6 | □□□□□ -2.51 | | |
| MT1A | P04731 | AC093292.1-201 | ENST00000505050 | 449 nt | TSL 3 BASIC | -0.6 | □□□□□ -2.51 | | |
| MT1A | P04731 | AC091885.1-201 | ENST00000506658 | 268 nt | BASIC | -0.6 | □□□□□ -2.51 | | |
| MT1A | P04731 | AC023050.3-201 | ENST00000541142 | 333 nt | BASIC | -0.6 | □□□□□ -2.51 | | |
| MT1A | P04731 | LINC00871-202 | ENST00000556071 | 554 nt | TSL 3 BASIC | -0.6 | □□□□□ -2.51 | | |
| MT1A | P04731 | AC093519.1-201 | ENST00000566109 | 298 nt | BASIC | -0.6 | □□□□□ -2.51 | | |
| MT1A | P04731 | AC138869.1-201 | ENST00000568623 | 124 nt | BASIC | -0.6 | □□□□□ -2.51 | | |
| MT1A | P04731 | TMF1P1-201 | ENST00000576058 | 373 nt | BASIC | -0.6 | □□□□□ -2.51 | | |
| MT1A | P04731 | MIR4782-201 | ENST00000577987 | 79 nt | BASIC | -0.6 | □□□□□ -2.51 | | |
| MT1A | P04731 | MIR3192-201 | ENST00000584920 | 77 nt | BASIC | -0.6 | □□□□□ -2.51 | | |
| MT1A | P04731 | BNIP3P30-201 | ENST00000601184 | 574 nt | BASIC | -0.6 | □□□□□ -2.51 | | |
| MT1A | P04731 | AC068790.2-201 | ENST00000602601 | 557 nt | BASIC | -0.6 | □□□□□ -2.51 | | |
| MT1A | P04731 | AL442067.1-201 | ENST00000613261 | 223 nt | BASIC | -0.6 | □□□□□ -2.51 | | |
| MT1A | P04731 | AC010133.1-201 | ENST00000615809 | 842 nt | BASIC | -0.6 | □□□□□ -2.51 | | |
| MT1A | P04731 | AL513423.1-201 | ENST00000621695 | 132 nt | BASIC | -0.6 | □□□□□ -2.51 | | |
| MT1A | P04731 | MIR6514-201 | ENST00000622549 | 70 nt | BASIC | -0.6 | □□□□□ -2.51 | | |
| MT1A | P04731 | Y_RNA.18-201 | ENST00000362461 | 102 nt | BASIC | -0.61 | □□□□□ -2.51 | | |
| MT1A | P04731 | RNU6-1167P-201 | ENST00000363227 | 94 nt | BASIC | -0.61 | □□□□□ -2.51 | | |
| MT1A | P04731 | SNORA36.1-201 | ENST00000363424 | 132 nt | BASIC | -0.61 | □□□□□ -2.51 | | |
| MT1A | P04731 | SNORA33-201 | ENST00000363664 | 130 nt | BASIC | -0.61 | □□□□□ -2.51 | | |
| MT1A | P04731 | SNORD113.3-201 | ENST00000364630 | 78 nt | BASIC | -0.61 | □□□□□ -2.51 | | |
| MT1A | P04731 | Y_RNA.488-201 | ENST00000384403 | 102 nt | BASIC | -0.61 | □□□□□ -2.51 | | |
| MT1A | P04731 | SNORA2B-201 | ENST00000384583 | 137 nt | BASIC | -0.61 | □□□□□ -2.51 | | |
| MT1A | P04731 | AL391704.1-203 | ENST00000414903 | 462 nt | TSL 3 BASIC | -0.61 | □□□□□ -2.51 | | |
| MT1A | P04731 | AC009313.1-201 | ENST00000425470 | 503 nt | TSL 3 BASIC | -0.61 | □□□□□ -2.51 | | |
| MT1A | P04731 | USP9YP22-201 | ENST00000438971 | 294 nt | BASIC | -0.61 | □□□□□ -2.51 | | |