Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
COL3A1P02461 SDAD1P2-201ENST00000441308 2028 ntBASIC2.98□□□□□ -1.93
COL3A1P02461 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
COL3A1P02461 AL359854.1-201ENST00000614203 1594 ntBASIC2.97□□□□□ -1.93
COL3A1P02461 Y_RNA.44-201ENST00000362676 108 ntBASIC2.97□□□□□ -1.93
COL3A1P02461 RNU6-1167P-201ENST00000363227 94 ntBASIC2.97□□□□□ -1.93
COL3A1P02461 RNU6-704P-201ENST00000364162 103 ntBASIC2.97□□□□□ -1.93
COL3A1P02461 RNU6-384P-201ENST00000364900 104 ntBASIC2.97□□□□□ -1.93
COL3A1P02461 SNORD50B-201ENST00000364995 70 ntBASIC2.97□□□□□ -1.93
COL3A1P02461 MIR221-201ENST00000385135 110 ntBASIC2.97□□□□□ -1.93
COL3A1P02461 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.97□□□□□ -1.93
COL3A1P02461 Y_RNA.626-201ENST00000411288 95 ntBASIC2.97□□□□□ -1.93
COL3A1P02461 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.97□□□□□ -1.93
COL3A1P02461 ARF4P2-201ENST00000430209 526 ntBASIC2.97□□□□□ -1.93
COL3A1P02461 MTCO1P5-201ENST00000433573 344 ntBASIC2.97□□□□□ -1.93
COL3A1P02461 AC096638.1-201ENST00000444678 216 ntBASIC2.97□□□□□ -1.93
COL3A1P02461 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.97□□□□□ -1.93
COL3A1P02461 Y_RNA.662-201ENST00000516028 97 ntBASIC2.97□□□□□ -1.93
COL3A1P02461 RNU6-496P-201ENST00000516145 99 ntBASIC2.97□□□□□ -1.93
COL3A1P02461 RNA5SP471-201ENST00000516971 106 ntBASIC2.97□□□□□ -1.93
COL3A1P02461 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.97□□□□□ -1.93
COL3A1P02461 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.97□□□□□ -1.93
COL3A1P02461 AC060766.3-201ENST00000591442 263 ntBASIC2.97□□□□□ -1.93
COL3A1P02461 AC002545.1-201ENST00000592511 181 ntBASIC2.97□□□□□ -1.93
COL3A1P02461 RPL23AP78-201ENST00000599928 470 ntBASIC2.97□□□□□ -1.93
COL3A1P02461 AP001485.1-201ENST00000604799 199 ntBASIC2.97□□□□□ -1.93
COL3A1P02461 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.97□□□□□ -1.93
COL3A1P02461 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
COL3A1P02461 RNU5A-1-201ENST00000362698 116 ntBASIC2.96□□□□□ -1.93
COL3A1P02461 RNU6-227P-201ENST00000362865 103 ntBASIC2.96□□□□□ -1.93
COL3A1P02461 Y_RNA.76-201ENST00000362931 109 ntBASIC2.96□□□□□ -1.93
COL3A1P02461 RNU6-290P-201ENST00000365212 101 ntBASIC2.96□□□□□ -1.93
COL3A1P02461 SNORD50.2-201ENST00000365465 70 ntBASIC2.96□□□□□ -1.93
COL3A1P02461 RNY1P5-201ENST00000383890 115 ntBASIC2.96□□□□□ -1.93
COL3A1P02461 SNORD78.2-201ENST00000391076 69 ntBASIC2.96□□□□□ -1.93
COL3A1P02461 RNU6-493P-201ENST00000391321 108 ntBASIC2.96□□□□□ -1.93
COL3A1P02461 AL627311.1-201ENST00000431514 115 ntBASIC2.96□□□□□ -1.93
COL3A1P02461 HMGN2P3-201ENST00000433603 273 ntBASIC2.96□□□□□ -1.93
COL3A1P02461 HMGN2P5-201ENST00000436882 273 ntBASIC2.96□□□□□ -1.93
COL3A1P02461 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.96□□□□□ -1.93
COL3A1P02461 MRPL42P6-201ENST00000486397 371 ntBASIC2.96□□□□□ -1.93
COL3A1P02461 RNU6-377P-201ENST00000515965 102 ntBASIC2.96□□□□□ -1.93
COL3A1P02461 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.96□□□□□ -1.93
COL3A1P02461 AC025755.1-201ENST00000521306 278 ntBASIC2.96□□□□□ -1.93
COL3A1P02461 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.96□□□□□ -1.93
COL3A1P02461 MIR4659A-201ENST00000580269 81 ntBASIC2.96□□□□□ -1.93
COL3A1P02461 AC008121.1-201ENST00000603244 268 ntBASIC2.96□□□□□ -1.93
COL3A1P02461 AC099778.2-201ENST00000610904 211 ntBASIC2.96□□□□□ -1.93
COL3A1P02461 HAUS6P2-201ENST00000433254 2404 ntBASIC2.96□□□□□ -1.94
COL3A1P02461 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
COL3A1P02461 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC2.96□□□□□ -1.94
COL3A1P02461 RNU6-858P-201ENST00000362436 107 ntBASIC2.96□□□□□ -1.94
COL3A1P02461 RNU6-1020P-201ENST00000363684 107 ntBASIC2.96□□□□□ -1.94
COL3A1P02461 Y_RNA.170-201ENST00000363746 110 ntBASIC2.96□□□□□ -1.94
COL3A1P02461 RNY4P28-201ENST00000365281 93 ntBASIC2.96□□□□□ -1.94
COL3A1P02461 SNORD63-201ENST00000384262 68 ntBASIC2.96□□□□□ -1.94
COL3A1P02461 RNU6-937P-201ENST00000384325 106 ntBASIC2.96□□□□□ -1.94
COL3A1P02461 AL023284.1-201ENST00000403956 276 ntBASIC2.96□□□□□ -1.94
COL3A1P02461 AL117339.3-201ENST00000418733 162 ntBASIC2.96□□□□□ -1.94
COL3A1P02461 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.96□□□□□ -1.94
COL3A1P02461 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.96□□□□□ -1.94
COL3A1P02461 SCARNA16.3-201ENST00000516595 184 ntBASIC2.96□□□□□ -1.94
COL3A1P02461 AC023824.2-201ENST00000566185 400 ntBASIC2.96□□□□□ -1.94
COL3A1P02461 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.96□□□□□ -1.94
COL3A1P02461 AC090617.3-201ENST00000573670 475 ntBASIC2.96□□□□□ -1.94
COL3A1P02461 AC037487.3-201ENST00000606668 112 ntBASIC2.96□□□□□ -1.94
COL3A1P02461 AL161629.2-201ENST00000615347 275 ntBASIC2.96□□□□□ -1.94
COL3A1P02461 AC021753.1-201ENST00000635724 168 ntBASIC2.96□□□□□ -1.94
COL3A1P02461 AL161431.1-201ENST00000618966 4205 ntBASIC2.96□□□□□ -1.94
COL3A1P02461 AC009812.4-201ENST00000569134 1805 ntBASIC2.95□□□□□ -1.94
COL3A1P02461 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
COL3A1P02461 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
COL3A1P02461 Y_RNA.292-201ENST00000364904 97 ntBASIC2.95□□□□□ -1.94
COL3A1P02461 RNU6-326P-201ENST00000365480 107 ntBASIC2.95□□□□□ -1.94
COL3A1P02461 Y_RNA.623-201ENST00000411128 95 ntBASIC2.95□□□□□ -1.94
COL3A1P02461 AC007064.1-201ENST00000412238 351 ntBASIC2.95□□□□□ -1.94
COL3A1P02461 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.95□□□□□ -1.94
COL3A1P02461 NDUFS5P3-201ENST00000450668 321 ntBASIC2.95□□□□□ -1.94
COL3A1P02461 snoU13.30-201ENST00000458951 104 ntBASIC2.95□□□□□ -1.94
COL3A1P02461 RPS29P27-201ENST00000463711 170 ntBASIC2.95□□□□□ -1.94
COL3A1P02461 RNU6-548P-201ENST00000517083 115 ntBASIC2.95□□□□□ -1.94
COL3A1P02461 AC084851.1-201ENST00000529105 249 ntBASIC2.95□□□□□ -1.94
COL3A1P02461 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.95□□□□□ -1.94
COL3A1P02461 AL161798.1-201ENST00000604630 131 ntBASIC2.95□□□□□ -1.94
COL3A1P02461 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
COL3A1P02461 Y_RNA.123-201ENST00000363338 102 ntBASIC2.94□□□□□ -1.94
COL3A1P02461 RNU6-173P-201ENST00000364215 104 ntBASIC2.94□□□□□ -1.94
COL3A1P02461 RNU6-1074P-201ENST00000383995 104 ntBASIC2.94□□□□□ -1.94
COL3A1P02461 MIR153-1-201ENST00000384914 90 ntBASIC2.94□□□□□ -1.94
COL3A1P02461 BTF3L4P2-201ENST00000392798 346 ntBASIC2.94□□□□□ -1.94
COL3A1P02461 CKS1BP5-201ENST00000434172 273 ntBASIC2.94□□□□□ -1.94
COL3A1P02461 AC016700.2-201ENST00000446011 156 ntBASIC2.94□□□□□ -1.94
COL3A1P02461 AC074198.2-201ENST00000508153 258 ntBASIC2.94□□□□□ -1.94
COL3A1P02461 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC2.94□□□□□ -1.94
COL3A1P02461 AL162424.1-201ENST00000602325 221 ntBASIC2.94□□□□□ -1.94
COL3A1P02461 SNORD113-5-201ENST00000607261 78 ntBASIC2.94□□□□□ -1.94
COL3A1P02461 U6.106-201ENST00000636360 105 ntBASIC2.94□□□□□ -1.94
COL3A1P02461 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
COL3A1P02461 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC2.93□□□□□ -1.94
COL3A1P02461 AC004925.1-201ENST00000624256 2706 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms