Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 RNA5SP182-201ENST00000516064 82 ntBASIC1.17□□□□□ -2.22
HLA-DQA1P01909 RNU1-41P-201ENST00000516161 162 ntBASIC1.17□□□□□ -2.22
HLA-DQA1P01909 Y_RNA.665-201ENST00000516177 98 ntBASIC1.17□□□□□ -2.22
HLA-DQA1P01909 RNU1-48P-201ENST00000516400 162 ntBASIC1.17□□□□□ -2.22
HLA-DQA1P01909 RNU6-314P-201ENST00000516574 104 ntBASIC1.17□□□□□ -2.22
HLA-DQA1P01909 RNU6-295P-201ENST00000516901 104 ntBASIC1.17□□□□□ -2.22
HLA-DQA1P01909 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.17□□□□□ -2.22
HLA-DQA1P01909 AC016256.1-201ENST00000547971 354 ntBASIC1.17□□□□□ -2.22
HLA-DQA1P01909 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.17□□□□□ -2.22
HLA-DQA1P01909 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.17□□□□□ -2.22
HLA-DQA1P01909 AC011494.1-201ENST00000596454 237 ntBASIC1.17□□□□□ -2.22
HLA-DQA1P01909 RPL17P51-201ENST00000605218 238 ntBASIC1.17□□□□□ -2.22
HLA-DQA1P01909 AC080013.6-201ENST00000606185 215 ntBASIC1.17□□□□□ -2.22
HLA-DQA1P01909 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.17□□□□□ -2.22
HLA-DQA1P01909 MIR8076-201ENST00000611401 83 ntBASIC1.17□□□□□ -2.22
HLA-DQA1P01909 DISC2.1-201ENST00000612827 205 ntBASIC1.17□□□□□ -2.22
HLA-DQA1P01909 AC083806.3-201ENST00000614016 455 ntBASIC1.17□□□□□ -2.22
HLA-DQA1P01909 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.17□□□□□ -2.22
HLA-DQA1P01909 MTND5P10-201ENST00000603719 1809 ntBASIC1.17□□□□□ -2.22
HLA-DQA1P01909 MIR424-201ENST00000362227 98 ntBASIC1.16□□□□□ -2.22
HLA-DQA1P01909 Y_RNA.132-201ENST00000363421 102 ntBASIC1.16□□□□□ -2.22
HLA-DQA1P01909 Y_RNA.151-201ENST00000363566 112 ntBASIC1.16□□□□□ -2.22
HLA-DQA1P01909 RNU6-968P-201ENST00000384076 107 ntBASIC1.16□□□□□ -2.22
HLA-DQA1P01909 RNU6-332P-201ENST00000391193 108 ntBASIC1.16□□□□□ -2.22
HLA-DQA1P01909 AL590002.1-201ENST00000406554 418 ntBASIC1.16□□□□□ -2.22
HLA-DQA1P01909 RPL21P111-201ENST00000418453 477 ntBASIC1.16□□□□□ -2.22
HLA-DQA1P01909 HMGB1P18-201ENST00000438801 619 ntBASIC1.16□□□□□ -2.22
HLA-DQA1P01909 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.16□□□□□ -2.22
HLA-DQA1P01909 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.16□□□□□ -2.22
HLA-DQA1P01909 MTCO2P7-201ENST00000446518 666 ntBASIC1.16□□□□□ -2.22
HLA-DQA1P01909 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.16□□□□□ -2.22
HLA-DQA1P01909 MTCO3P8-201ENST00000453691 755 ntBASIC1.16□□□□□ -2.22
HLA-DQA1P01909 snoU13.26-201ENST00000459452 105 ntBASIC1.16□□□□□ -2.22
HLA-DQA1P01909 AC005908.1-201ENST00000468701 347 ntBASIC1.16□□□□□ -2.22
HLA-DQA1P01909 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.16□□□□□ -2.22
HLA-DQA1P01909 MTCO1P29-201ENST00000496868 288 ntBASIC1.16□□□□□ -2.22
HLA-DQA1P01909 AC114801.2-201ENST00000503825 781 ntBASIC1.16□□□□□ -2.22
HLA-DQA1P01909 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.16□□□□□ -2.22
HLA-DQA1P01909 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.16□□□□□ -2.22
HLA-DQA1P01909 RNU6-1041P-201ENST00000516254 102 ntBASIC1.16□□□□□ -2.22
HLA-DQA1P01909 SNORA25.15-201ENST00000516487 89 ntBASIC1.16□□□□□ -2.22
HLA-DQA1P01909 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.16□□□□□ -2.22
HLA-DQA1P01909 RNU6-506P-201ENST00000516553 94 ntBASIC1.16□□□□□ -2.22
HLA-DQA1P01909 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
HLA-DQA1P01909 ZNF519P2-201ENST00000557032 169 ntBASIC1.16□□□□□ -2.22
HLA-DQA1P01909 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.16□□□□□ -2.22
HLA-DQA1P01909 AP000907.4-201ENST00000604143 237 ntBASIC1.16□□□□□ -2.22
HLA-DQA1P01909 AC016925.2-201ENST00000605108 242 ntBASIC1.16□□□□□ -2.22
HLA-DQA1P01909 MIR502-201ENST00000606349 86 ntBASIC1.16□□□□□ -2.22
HLA-DQA1P01909 MIR8081-201ENST00000611533 95 ntBASIC1.16□□□□□ -2.22
HLA-DQA1P01909 MIR6845-201ENST00000613182 61 ntBASIC1.16□□□□□ -2.22
HLA-DQA1P01909 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.16□□□□□ -2.22
HLA-DQA1P01909 AC005562.2-201ENST00000618264 111 ntBASIC1.16□□□□□ -2.22
HLA-DQA1P01909 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
HLA-DQA1P01909 RNU6-451P-201ENST00000362921 107 ntBASIC1.15□□□□□ -2.23
HLA-DQA1P01909 Y_RNA.256-201ENST00000364594 104 ntBASIC1.15□□□□□ -2.23
HLA-DQA1P01909 RNU6-784P-201ENST00000384330 106 ntBASIC1.15□□□□□ -2.23
HLA-DQA1P01909 MIR1283-1-201ENST00000408494 87 ntBASIC1.15□□□□□ -2.23
HLA-DQA1P01909 AC060773.1-201ENST00000421698 310 ntBASIC1.15□□□□□ -2.23
HLA-DQA1P01909 AL590632.1-201ENST00000424289 371 ntBASIC1.15□□□□□ -2.23
HLA-DQA1P01909 NDUFA5P4-201ENST00000436704 385 ntBASIC1.15□□□□□ -2.23
HLA-DQA1P01909 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.15□□□□□ -2.23
HLA-DQA1P01909 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.15□□□□□ -2.23
HLA-DQA1P01909 AL357134.1-201ENST00000445848 426 ntBASIC1.15□□□□□ -2.23
HLA-DQA1P01909 AC016717.1-201ENST00000448918 286 ntBASIC1.15□□□□□ -2.23
HLA-DQA1P01909 MTND1P11-201ENST00000456661 876 ntBASIC1.15□□□□□ -2.23
HLA-DQA1P01909 RN7SL429P-201ENST00000479090 223 ntBASIC1.15□□□□□ -2.23
HLA-DQA1P01909 RN7SL489P-201ENST00000486185 223 ntBASIC1.15□□□□□ -2.23
HLA-DQA1P01909 RN7SL327P-201ENST00000488659 223 ntBASIC1.15□□□□□ -2.23
HLA-DQA1P01909 RPL23AP75-201ENST00000491601 451 ntBASIC1.15□□□□□ -2.23
HLA-DQA1P01909 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.15□□□□□ -2.23
HLA-DQA1P01909 AC116337.1-201ENST00000509680 687 ntBASIC1.15□□□□□ -2.23
HLA-DQA1P01909 AC008834.1-201ENST00000511612 175 ntBASIC1.15□□□□□ -2.23
HLA-DQA1P01909 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.15□□□□□ -2.23
HLA-DQA1P01909 SUMO2P18-201ENST00000518873 252 ntBASIC1.15□□□□□ -2.23
HLA-DQA1P01909 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.15□□□□□ -2.23
HLA-DQA1P01909 AL160236.1-201ENST00000556317 195 ntBASIC1.15□□□□□ -2.23
HLA-DQA1P01909 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.15□□□□□ -2.23
HLA-DQA1P01909 MIR5006-201ENST00000583027 110 ntBASIC1.15□□□□□ -2.23
HLA-DQA1P01909 AC146944.4-201ENST00000602697 718 ntBASIC1.15□□□□□ -2.23
HLA-DQA1P01909 AC116312.1-201ENST00000606841 314 ntBASIC1.15□□□□□ -2.23
HLA-DQA1P01909 AL133215.3-201ENST00000609801 448 ntBASIC1.15□□□□□ -2.23
HLA-DQA1P01909 RN7SL853P-201ENST00000617250 223 ntBASIC1.15□□□□□ -2.23
HLA-DQA1P01909 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.15□□□□□ -2.23
HLA-DQA1P01909 MIR1321-201ENST00000637766 79 ntBASIC1.15□□□□□ -2.23
HLA-DQA1P01909 AC099654.12-201ENST00000639868 649 ntBASIC1.15□□□□□ -2.23
HLA-DQA1P01909 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.15□□□□□ -2.23
HLA-DQA1P01909 AC233981.2-201ENST00000611524 1614 ntBASIC1.15□□□□□ -2.23
HLA-DQA1P01909 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.14□□□□□ -2.23
HLA-DQA1P01909 SNORD50.1-201ENST00000362987 71 ntBASIC1.14□□□□□ -2.23
HLA-DQA1P01909 RNY3P3-201ENST00000363816 102 ntBASIC1.14□□□□□ -2.23
HLA-DQA1P01909 MIR30A-201ENST00000385092 71 ntBASIC1.14□□□□□ -2.23
HLA-DQA1P01909 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
HLA-DQA1P01909 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
HLA-DQA1P01909 MIR934-201ENST00000401241 83 ntBASIC1.14□□□□□ -2.23
HLA-DQA1P01909 AL033519.2-201ENST00000403958 392 ntBASIC1.14□□□□□ -2.23
HLA-DQA1P01909 SNORA11.2-201ENST00000408318 127 ntBASIC1.14□□□□□ -2.23
HLA-DQA1P01909 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.14□□□□□ -2.23
HLA-DQA1P01909 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.14□□□□□ -2.23
HLA-DQA1P01909 SNRPEP10-201ENST00000420249 274 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms