Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 Y_RNA.6-201ENST00000362350 114 ntBASIC2.04□□□□□ -2.08
GGPS1O95749 RNU6-562P-201ENST00000362731 107 ntBASIC2.04□□□□□ -2.08
GGPS1O95749 RNU6-438P-201ENST00000365561 103 ntBASIC2.04□□□□□ -2.08
GGPS1O95749 RNA5SP501-201ENST00000410990 112 ntBASIC2.04□□□□□ -2.08
GGPS1O95749 EIF4EP2-201ENST00000422816 654 ntBASIC2.04□□□□□ -2.08
GGPS1O95749 AL590632.1-201ENST00000424289 371 ntBASIC2.04□□□□□ -2.08
GGPS1O95749 SNRPEP8-201ENST00000442866 260 ntBASIC2.04□□□□□ -2.08
GGPS1O95749 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC2.04□□□□□ -2.08
GGPS1O95749 MTND1P11-201ENST00000456661 876 ntBASIC2.04□□□□□ -2.08
GGPS1O95749 AC016925.1-201ENST00000458303 298 ntBASIC2.04□□□□□ -2.08
GGPS1O95749 RPS29P25-201ENST00000481709 171 ntBASIC2.04□□□□□ -2.08
GGPS1O95749 RPS23P5-201ENST00000495419 428 ntBASIC2.04□□□□□ -2.08
GGPS1O95749 SNORA25.15-201ENST00000516487 89 ntBASIC2.04□□□□□ -2.08
GGPS1O95749 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.04□□□□□ -2.08
GGPS1O95749 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.04□□□□□ -2.08
GGPS1O95749 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.04□□□□□ -2.08
GGPS1O95749 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.04□□□□□ -2.08
GGPS1O95749 MIR3672-201ENST00000584290 82 ntBASIC2.04□□□□□ -2.08
GGPS1O95749 AC023043.2-201ENST00000589678 1026 ntBASIC2.04□□□□□ -2.08
GGPS1O95749 uc_338.20-201ENST00000621563 178 ntBASIC2.04□□□□□ -2.08
GGPS1O95749 AC233981.2-201ENST00000611524 1614 ntBASIC2.03□□□□□ -2.08
GGPS1O95749 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.03□□□□□ -2.08
GGPS1O95749 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
GGPS1O95749 MIR340-201ENST00000362125 95 ntBASIC2.03□□□□□ -2.08
GGPS1O95749 Y_RNA.151-201ENST00000363566 112 ntBASIC2.03□□□□□ -2.08
GGPS1O95749 Y_RNA.157-201ENST00000363638 102 ntBASIC2.03□□□□□ -2.08
GGPS1O95749 Y_RNA.212-201ENST00000364177 102 ntBASIC2.03□□□□□ -2.08
GGPS1O95749 Y_RNA.453-201ENST00000384223 109 ntBASIC2.03□□□□□ -2.08
GGPS1O95749 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
GGPS1O95749 SNORA12.2-201ENST00000391040 156 ntBASIC2.03□□□□□ -2.08
GGPS1O95749 SNORD115-47-201ENST00000391226 86 ntBASIC2.03□□□□□ -2.08
GGPS1O95749 AL627390.1-201ENST00000396055 340 ntBASIC2.03□□□□□ -2.08
GGPS1O95749 AC009161.1-201ENST00000417306 376 ntBASIC2.03□□□□□ -2.08
GGPS1O95749 UBE2V1P8-201ENST00000437166 265 ntBASIC2.03□□□□□ -2.08
GGPS1O95749 DAP3P1-201ENST00000441522 278 ntBASIC2.03□□□□□ -2.08
GGPS1O95749 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.03□□□□□ -2.08
GGPS1O95749 AF186996.7-201ENST00000492781 209 ntBASIC2.03□□□□□ -2.08
GGPS1O95749 DEFB131C-201ENST00000528817 165 ntBASIC2.03□□□□□ -2.08
GGPS1O95749 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.03□□□□□ -2.08
GGPS1O95749 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.03□□□□□ -2.08
GGPS1O95749 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.03□□□□□ -2.08
GGPS1O95749 RMST_6.1-201ENST00000611980 203 ntBASIC2.03□□□□□ -2.08
GGPS1O95749 AC098657.3-201ENST00000620434 263 ntBASIC2.03□□□□□ -2.08
GGPS1O95749 AC139792.2-201ENST00000624218 587 ntBASIC2.03□□□□□ -2.08
GGPS1O95749 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.03□□□□□ -2.08
GGPS1O95749 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
GGPS1O95749 CENPCP1-201ENST00000533085 2578 ntBASIC2.02□□□□□ -2.09
GGPS1O95749 RNA5SP190-201ENST00000365222 118 ntBASIC2.02□□□□□ -2.09
GGPS1O95749 SNORA18.2-201ENST00000383865 132 ntBASIC2.02□□□□□ -2.09
GGPS1O95749 RNU6-1026P-201ENST00000384465 108 ntBASIC2.02□□□□□ -2.09
GGPS1O95749 RNU6-790P-201ENST00000384479 105 ntBASIC2.02□□□□□ -2.09
GGPS1O95749 MIR676-201ENST00000390702 67 ntBASIC2.02□□□□□ -2.09
GGPS1O95749 SNORA48.1-201ENST00000390879 135 ntBASIC2.02□□□□□ -2.09
GGPS1O95749 RNA5SP212-201ENST00000391223 107 ntBASIC2.02□□□□□ -2.09
GGPS1O95749 MIR548F1-201ENST00000408667 84 ntBASIC2.02□□□□□ -2.09
GGPS1O95749 RPL23AP6-201ENST00000446637 472 ntBASIC2.02□□□□□ -2.09
GGPS1O95749 PCMTD1P1-201ENST00000455560 355 ntBASIC2.02□□□□□ -2.09
GGPS1O95749 SNORD13-201ENST00000459299 104 ntBASIC2.02□□□□□ -2.09
GGPS1O95749 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.02□□□□□ -2.09
GGPS1O95749 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.02□□□□□ -2.09
GGPS1O95749 RNU6-250P-201ENST00000516958 103 ntBASIC2.02□□□□□ -2.09
GGPS1O95749 RNU6-1314P-201ENST00000517139 104 ntBASIC2.02□□□□□ -2.09
GGPS1O95749 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.02□□□□□ -2.09
GGPS1O95749 AC026470.2-201ENST00000561492 181 ntBASIC2.02□□□□□ -2.09
GGPS1O95749 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.02□□□□□ -2.09
GGPS1O95749 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.02□□□□□ -2.09
GGPS1O95749 AP000942.3-201ENST00000603702 160 ntBASIC2.02□□□□□ -2.09
GGPS1O95749 AC005562.2-201ENST00000618264 111 ntBASIC2.02□□□□□ -2.09
GGPS1O95749 AC009033.1-201ENST00000624279 431 ntBASIC2.02□□□□□ -2.09
GGPS1O95749 MIR3662-201ENST00000637030 95 ntBASIC2.02□□□□□ -2.09
GGPS1O95749 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
GGPS1O95749 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
GGPS1O95749 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
GGPS1O95749 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
GGPS1O95749 CBX3P1-201ENST00000325243 554 ntBASIC2.01□□□□□ -2.09
GGPS1O95749 RNU2-40P-201ENST00000410833 196 ntBASIC2.01□□□□□ -2.09
GGPS1O95749 AC139712.2-201ENST00000424302 339 ntBASIC2.01□□□□□ -2.09
GGPS1O95749 AL353572.1-201ENST00000442490 417 ntBASIC2.01□□□□□ -2.09
GGPS1O95749 OR2AQ1P-201ENST00000451972 200 ntBASIC2.01□□□□□ -2.09
GGPS1O95749 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.01□□□□□ -2.09
GGPS1O95749 AC130509.1-201ENST00000464158 433 ntBASIC2.01□□□□□ -2.09
GGPS1O95749 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.01□□□□□ -2.09
GGPS1O95749 MIR3683-201ENST00000580847 82 ntBASIC2.01□□□□□ -2.09
GGPS1O95749 MIR3942-201ENST00000585264 109 ntBASIC2.01□□□□□ -2.09
GGPS1O95749 AC016727.2-201ENST00000603988 621 ntBASIC2.01□□□□□ -2.09
GGPS1O95749 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.01□□□□□ -2.09
GGPS1O95749 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
GGPS1O95749 SNORD50.1-201ENST00000362987 71 ntBASIC2□□□□□ -2.09
GGPS1O95749 SNORA16.1-201ENST00000364597 132 ntBASIC2□□□□□ -2.09
GGPS1O95749 SNORD116-11-201ENST00000383882 92 ntBASIC2□□□□□ -2.09
GGPS1O95749 MIR517A-201ENST00000385001 87 ntBASIC2□□□□□ -2.09
GGPS1O95749 SNORA17.3-201ENST00000391159 129 ntBASIC2□□□□□ -2.09
GGPS1O95749 HMGN2P19-201ENST00000425149 265 ntBASIC2□□□□□ -2.09
GGPS1O95749 AC079354.2-201ENST00000453523 154 ntBASIC2□□□□□ -2.09
GGPS1O95749 AC087477.1-201ENST00000465747 340 ntBASIC2□□□□□ -2.09
GGPS1O95749 RNU6-864P-201ENST00000516256 108 ntBASIC2□□□□□ -2.09
GGPS1O95749 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2□□□□□ -2.09
GGPS1O95749 AC022254.1-201ENST00000567857 235 ntBASIC2□□□□□ -2.09
GGPS1O95749 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2□□□□□ -2.09
GGPS1O95749 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 196.2 ms