Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 RNU6-579P-201ENST00000516879 102 ntBASIC3.23□□□□□ -1.89
CNOT4O95628 CYCSP23-201ENST00000519781 313 ntBASIC3.23□□□□□ -1.89
CNOT4O95628 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CNOT4O95628 TGIF1P1-201ENST00000558095 802 ntBASIC3.23□□□□□ -1.89
CNOT4O95628 AC055872.1-201ENST00000570978 278 ntBASIC3.23□□□□□ -1.89
CNOT4O95628 MIR4308-201ENST00000580634 81 ntBASIC3.23□□□□□ -1.89
CNOT4O95628 AC005828.6-201ENST00000606610 232 ntBASIC3.23□□□□□ -1.89
CNOT4O95628 AC104465.1-201ENST00000611365 139 ntBASIC3.23□□□□□ -1.89
CNOT4O95628 AP003355.3-201ENST00000623465 114 ntBASIC3.23□□□□□ -1.89
CNOT4O95628 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.23□□□□□ -1.89
CNOT4O95628 AC093908.1-201ENST00000623125 8092 ntBASIC3.23□□□□□ -1.89
CNOT4O95628 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CNOT4O95628 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CNOT4O95628 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CNOT4O95628 MTND5P35-201ENST00000557537 1720 ntBASIC3.22□□□□□ -1.89
CNOT4O95628 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CNOT4O95628 RNU6-1285P-201ENST00000363480 105 ntBASIC3.22□□□□□ -1.89
CNOT4O95628 Y_RNA.262-201ENST00000364641 102 ntBASIC3.22□□□□□ -1.89
CNOT4O95628 RNA5SP51-201ENST00000364750 119 ntBASIC3.22□□□□□ -1.89
CNOT4O95628 RNU6-487P-201ENST00000365430 104 ntBASIC3.22□□□□□ -1.89
CNOT4O95628 RNA5SP390-201ENST00000410191 113 ntBASIC3.22□□□□□ -1.89
CNOT4O95628 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.22□□□□□ -1.89
CNOT4O95628 PTGES3P4-201ENST00000426243 356 ntBASIC3.22□□□□□ -1.89
CNOT4O95628 SNORA59A-201ENST00000459326 152 ntBASIC3.22□□□□□ -1.89
CNOT4O95628 RNU6-625P-201ENST00000459412 107 ntBASIC3.22□□□□□ -1.89
CNOT4O95628 RNU5F-8P-201ENST00000515941 111 ntBASIC3.22□□□□□ -1.89
CNOT4O95628 RNU6-1219P-201ENST00000516143 112 ntBASIC3.22□□□□□ -1.89
CNOT4O95628 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.22□□□□□ -1.89
CNOT4O95628 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.22□□□□□ -1.89
CNOT4O95628 AC090897.2-201ENST00000581715 130 ntBASIC3.22□□□□□ -1.89
CNOT4O95628 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.22□□□□□ -1.89
CNOT4O95628 AL137843.1-201ENST00000605078 385 ntBASIC3.22□□□□□ -1.89
CNOT4O95628 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.22□□□□□ -1.89
CNOT4O95628 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.22□□□□□ -1.89
CNOT4O95628 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.22□□□□□ -1.89
CNOT4O95628 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.89
CNOT4O95628 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.89
CNOT4O95628 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.21□□□□□ -1.9
CNOT4O95628 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
CNOT4O95628 Y_RNA.179-201ENST00000363844 90 ntBASIC3.21□□□□□ -1.9
CNOT4O95628 Y_RNA.398-201ENST00000383952 99 ntBASIC3.21□□□□□ -1.9
CNOT4O95628 RNU6-622P-201ENST00000384272 103 ntBASIC3.21□□□□□ -1.9
CNOT4O95628 MIR627-201ENST00000384979 97 ntBASIC3.21□□□□□ -1.9
CNOT4O95628 FO393413.1-201ENST00000402892 195 ntBASIC3.21□□□□□ -1.9
CNOT4O95628 OOSP1P1-201ENST00000423265 274 ntBASIC3.21□□□□□ -1.9
CNOT4O95628 AC024067.1-201ENST00000426199 223 ntBASIC3.21□□□□□ -1.9
CNOT4O95628 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.21□□□□□ -1.9
CNOT4O95628 RPL30P12-201ENST00000474666 353 ntBASIC3.21□□□□□ -1.9
CNOT4O95628 RN7SKP83-201ENST00000516512 178 ntBASIC3.21□□□□□ -1.9
CNOT4O95628 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.21□□□□□ -1.9
CNOT4O95628 AC018448.1-201ENST00000552843 316 ntBASIC3.21□□□□□ -1.9
CNOT4O95628 AP001485.1-201ENST00000604799 199 ntBASIC3.21□□□□□ -1.9
CNOT4O95628 AC005000.2-201ENST00000605468 310 ntBASIC3.21□□□□□ -1.9
CNOT4O95628 MIR7515-201ENST00000637837 67 ntBASIC3.21□□□□□ -1.9
CNOT4O95628 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.21□□□□□ -1.9
CNOT4O95628 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CNOT4O95628 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.21□□□□□ -1.9
CNOT4O95628 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
CNOT4O95628 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.2□□□□□ -1.9
CNOT4O95628 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CNOT4O95628 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CNOT4O95628 MFSD8-233ENST00000641482 4860 ntBASIC3.2□□□□□ -1.9
CNOT4O95628 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
CNOT4O95628 RNU4-80P-201ENST00000363200 141 ntBASIC3.2□□□□□ -1.9
CNOT4O95628 RNU6-283P-201ENST00000364788 107 ntBASIC3.2□□□□□ -1.9
CNOT4O95628 RNU6-1135P-201ENST00000411083 103 ntBASIC3.2□□□□□ -1.9
CNOT4O95628 AC019205.3-201ENST00000424573 156 ntBASIC3.2□□□□□ -1.9
CNOT4O95628 AC006989.1-201ENST00000427212 131 ntBASIC3.2□□□□□ -1.9
CNOT4O95628 RAB28P5-201ENST00000427490 651 ntBASIC3.2□□□□□ -1.9
CNOT4O95628 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.2□□□□□ -1.9
CNOT4O95628 RPL23AP70-201ENST00000483361 460 ntBASIC3.2□□□□□ -1.9
CNOT4O95628 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.2□□□□□ -1.9
CNOT4O95628 RNU6-966P-201ENST00000516479 104 ntBASIC3.2□□□□□ -1.9
CNOT4O95628 SNORA31.16-201ENST00000516773 139 ntBASIC3.2□□□□□ -1.9
CNOT4O95628 ACA59.2-201ENST00000517061 156 ntBASIC3.2□□□□□ -1.9
CNOT4O95628 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.2□□□□□ -1.9
CNOT4O95628 AL391813.1-201ENST00000603098 260 ntBASIC3.2□□□□□ -1.9
CNOT4O95628 AC108706.1-201ENST00000611053 297 ntBASIC3.2□□□□□ -1.9
CNOT4O95628 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.2□□□□□ -1.9
CNOT4O95628 MIR7153-201ENST00000637758 57 ntBASIC3.2□□□□□ -1.9
CNOT4O95628 RBBP8P1-201ENST00000449447 1844 ntBASIC3.2□□□□□ -1.9
CNOT4O95628 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
CNOT4O95628 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
CNOT4O95628 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
CNOT4O95628 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CNOT4O95628 PWAR6-201ENST00000552334 4618 ntBASIC3.2□□□□□ -1.9
CNOT4O95628 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CNOT4O95628 AC092593.1-201ENST00000515413 1815 ntBASIC3.19□□□□□ -1.9
CNOT4O95628 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CNOT4O95628 Y_RNA.101-201ENST00000363154 102 ntBASIC3.19□□□□□ -1.9
CNOT4O95628 RNA5SP50-201ENST00000363731 107 ntBASIC3.19□□□□□ -1.9
CNOT4O95628 RNU4-56P-201ENST00000364700 142 ntBASIC3.19□□□□□ -1.9
CNOT4O95628 RNA5SP267-201ENST00000364893 126 ntBASIC3.19□□□□□ -1.9
CNOT4O95628 RNU6-245P-201ENST00000384020 107 ntBASIC3.19□□□□□ -1.9
CNOT4O95628 RNU6-793P-201ENST00000384233 104 ntBASIC3.19□□□□□ -1.9
CNOT4O95628 Y_RNA.498-201ENST00000384460 102 ntBASIC3.19□□□□□ -1.9
CNOT4O95628 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.19□□□□□ -1.9
CNOT4O95628 AC007215.1-201ENST00000464893 276 ntBASIC3.19□□□□□ -1.9
CNOT4O95628 AL121594.1-201ENST00000475906 575 ntBASIC3.19□□□□□ -1.9
CNOT4O95628 AC090525.1-201ENST00000479116 478 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 135.3 ms