Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.55□□□□□ -1.84
RAPGEF3O95398 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.55□□□□□ -1.84
RAPGEF3O95398 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RAPGEF3O95398 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RAPGEF3O95398 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.55□□□□□ -1.84
RAPGEF3O95398 RNU6-874P-201ENST00000362390 105 ntBASIC3.55□□□□□ -1.84
RAPGEF3O95398 Y_RNA.40-201ENST00000362645 93 ntBASIC3.55□□□□□ -1.84
RAPGEF3O95398 Y_RNA.118-201ENST00000363300 101 ntBASIC3.55□□□□□ -1.84
RAPGEF3O95398 RNU6-137P-201ENST00000363680 108 ntBASIC3.55□□□□□ -1.84
RAPGEF3O95398 RNU4-56P-201ENST00000364700 142 ntBASIC3.55□□□□□ -1.84
RAPGEF3O95398 Y_RNA.485-201ENST00000384395 102 ntBASIC3.55□□□□□ -1.84
RAPGEF3O95398 RNU6-823P-201ENST00000391042 103 ntBASIC3.55□□□□□ -1.84
RAPGEF3O95398 AC114482.1-201ENST00000418010 247 ntBASIC3.55□□□□□ -1.84
RAPGEF3O95398 AL358176.2-201ENST00000425769 204 ntBASIC3.55□□□□□ -1.84
RAPGEF3O95398 MTND3P2-201ENST00000438452 342 ntBASIC3.55□□□□□ -1.84
RAPGEF3O95398 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.55□□□□□ -1.84
RAPGEF3O95398 RNU7-169P-201ENST00000459456 61 ntBASIC3.55□□□□□ -1.84
RAPGEF3O95398 AIG1P1-201ENST00000503376 148 ntBASIC3.55□□□□□ -1.84
RAPGEF3O95398 RNU6-1198P-201ENST00000516904 67 ntBASIC3.55□□□□□ -1.84
RAPGEF3O95398 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.55□□□□□ -1.84
RAPGEF3O95398 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.55□□□□□ -1.84
RAPGEF3O95398 AC113195.1-201ENST00000579952 141 ntBASIC3.55□□□□□ -1.84
RAPGEF3O95398 AL132822.1-201ENST00000617063 513 ntBASIC3.55□□□□□ -1.84
RAPGEF3O95398 UCA1.1-201ENST00000620952 75 ntBASIC3.55□□□□□ -1.84
RAPGEF3O95398 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.55□□□□□ -1.84
RAPGEF3O95398 AC092881.1-201ENST00000638218 2733 ntBASIC3.54□□□□□ -1.84
RAPGEF3O95398 MIR148B-201ENST00000362252 99 ntBASIC3.54□□□□□ -1.84
RAPGEF3O95398 U3.13-201ENST00000364804 214 ntBASIC3.54□□□□□ -1.84
RAPGEF3O95398 Y_RNA.355-201ENST00000365462 98 ntBASIC3.54□□□□□ -1.84
RAPGEF3O95398 SNORA63.7-201ENST00000365579 123 ntBASIC3.54□□□□□ -1.84
RAPGEF3O95398 RNU6-1083P-201ENST00000384022 107 ntBASIC3.54□□□□□ -1.84
RAPGEF3O95398 MIR32-201ENST00000384965 70 ntBASIC3.54□□□□□ -1.84
RAPGEF3O95398 RPS26P42-201ENST00000413485 326 ntBASIC3.54□□□□□ -1.84
RAPGEF3O95398 AL590135.1-201ENST00000422215 156 ntBASIC3.54□□□□□ -1.84
RAPGEF3O95398 AC019205.3-201ENST00000424573 156 ntBASIC3.54□□□□□ -1.84
RAPGEF3O95398 AC096644.2-201ENST00000429278 159 ntBASIC3.54□□□□□ -1.84
RAPGEF3O95398 AC018634.1-201ENST00000437554 401 ntBASIC3.54□□□□□ -1.84
RAPGEF3O95398 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.54□□□□□ -1.84
RAPGEF3O95398 AC016700.2-201ENST00000446011 156 ntBASIC3.54□□□□□ -1.84
RAPGEF3O95398 AC103975.1-201ENST00000482506 483 ntBASIC3.54□□□□□ -1.84
RAPGEF3O95398 RPL36AP48-201ENST00000485521 314 ntBASIC3.54□□□□□ -1.84
RAPGEF3O95398 RPL22P13-201ENST00000493291 347 ntBASIC3.54□□□□□ -1.84
RAPGEF3O95398 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.54□□□□□ -1.84
RAPGEF3O95398 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.54□□□□□ -1.84
RAPGEF3O95398 AL117187.1-201ENST00000555482 181 ntBASIC3.54□□□□□ -1.84
RAPGEF3O95398 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.54□□□□□ -1.84
RAPGEF3O95398 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RAPGEF3O95398 AL359854.1-201ENST00000614203 1594 ntBASIC3.54□□□□□ -1.84
RAPGEF3O95398 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RAPGEF3O95398 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
RAPGEF3O95398 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.53□□□□□ -1.84
RAPGEF3O95398 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
RAPGEF3O95398 RNU6-212P-201ENST00000362642 104 ntBASIC3.53□□□□□ -1.84
RAPGEF3O95398 RNY3P11-201ENST00000364153 102 ntBASIC3.53□□□□□ -1.84
RAPGEF3O95398 SNORA26.9-201ENST00000391322 122 ntBASIC3.53□□□□□ -1.84
RAPGEF3O95398 RNU6-1140P-201ENST00000410517 106 ntBASIC3.53□□□□□ -1.84
RAPGEF3O95398 AC012306.1-201ENST00000423267 114 ntBASIC3.53□□□□□ -1.84
RAPGEF3O95398 OR2AQ1P-201ENST00000451972 200 ntBASIC3.53□□□□□ -1.84
RAPGEF3O95398 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.53□□□□□ -1.84
RAPGEF3O95398 RNA5SP380-201ENST00000517190 98 ntBASIC3.53□□□□□ -1.84
RAPGEF3O95398 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.53□□□□□ -1.84
RAPGEF3O95398 AC040926.1-201ENST00000530195 238 ntBASIC3.53□□□□□ -1.84
RAPGEF3O95398 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC3.53□□□□□ -1.84
RAPGEF3O95398 AC090617.3-201ENST00000573670 475 ntBASIC3.53□□□□□ -1.84
RAPGEF3O95398 AC073410.2-201ENST00000603240 332 ntBASIC3.53□□□□□ -1.84
RAPGEF3O95398 AC124312.5-201ENST00000604451 268 ntBASIC3.53□□□□□ -1.84
RAPGEF3O95398 AL138963.2-201ENST00000605137 226 ntBASIC3.53□□□□□ -1.84
RAPGEF3O95398 AC008121.3-201ENST00000618726 433 ntBASIC3.53□□□□□ -1.84
RAPGEF3O95398 SNORD98-201ENST00000636377 67 ntBASIC3.53□□□□□ -1.84
RAPGEF3O95398 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.53□□□□□ -1.84
RAPGEF3O95398 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.85
RAPGEF3O95398 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
RAPGEF3O95398 Y_RNA.106-201ENST00000363189 100 ntBASIC3.52□□□□□ -1.85
RAPGEF3O95398 RNU6-529P-201ENST00000363383 104 ntBASIC3.52□□□□□ -1.85
RAPGEF3O95398 Y_RNA.152-201ENST00000363578 100 ntBASIC3.52□□□□□ -1.85
RAPGEF3O95398 Y_RNA.269-201ENST00000364685 89 ntBASIC3.52□□□□□ -1.85
RAPGEF3O95398 Y_RNA.358-201ENST00000365491 99 ntBASIC3.52□□□□□ -1.85
RAPGEF3O95398 RNU6-805P-201ENST00000365643 106 ntBASIC3.52□□□□□ -1.85
RAPGEF3O95398 RNU6-1105P-201ENST00000384774 107 ntBASIC3.52□□□□□ -1.85
RAPGEF3O95398 MIR1252-201ENST00000408861 65 ntBASIC3.52□□□□□ -1.85
RAPGEF3O95398 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.52□□□□□ -1.85
RAPGEF3O95398 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.52□□□□□ -1.85
RAPGEF3O95398 TOMM22P6-201ENST00000465035 409 ntBASIC3.52□□□□□ -1.85
RAPGEF3O95398 HMGB1P35-201ENST00000503360 598 ntBASIC3.52□□□□□ -1.85
RAPGEF3O95398 SEM1P1-201ENST00000506694 209 ntBASIC3.52□□□□□ -1.85
RAPGEF3O95398 RNU6-1046P-201ENST00000516538 107 ntBASIC3.52□□□□□ -1.85
RAPGEF3O95398 SCARNA11.3-201ENST00000517276 130 ntBASIC3.52□□□□□ -1.85
RAPGEF3O95398 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.52□□□□□ -1.85
RAPGEF3O95398 AL355297.3-201ENST00000604082 446 ntBASIC3.52□□□□□ -1.85
RAPGEF3O95398 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.51□□□□□ -1.85
RAPGEF3O95398 Y_RNA.133-201ENST00000363428 110 ntBASIC3.51□□□□□ -1.85
RAPGEF3O95398 SNORD115-8-201ENST00000363856 82 ntBASIC3.51□□□□□ -1.85
RAPGEF3O95398 RNU4-50P-201ENST00000364361 141 ntBASIC3.51□□□□□ -1.85
RAPGEF3O95398 SNORD115-38-201ENST00000365037 82 ntBASIC3.51□□□□□ -1.85
RAPGEF3O95398 RNU1-57P-201ENST00000384491 166 ntBASIC3.51□□□□□ -1.85
RAPGEF3O95398 MIR548F4-201ENST00000408515 105 ntBASIC3.51□□□□□ -1.85
RAPGEF3O95398 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.51□□□□□ -1.85
RAPGEF3O95398 MTCO3P8-201ENST00000453691 755 ntBASIC3.51□□□□□ -1.85
RAPGEF3O95398 RNU7-87P-201ENST00000459343 62 ntBASIC3.51□□□□□ -1.85
RAPGEF3O95398 RNU5F-2P-201ENST00000516066 82 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms