Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.61□□□□□ -1.67
RNF40O75150 AC025554.1-201ENST00000505641 188 ntBASIC4.61□□□□□ -1.67
RNF40O75150 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.61□□□□□ -1.67
RNF40O75150 SNORD19.2-201ENST00000516978 73 ntBASIC4.61□□□□□ -1.67
RNF40O75150 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.61□□□□□ -1.67
RNF40O75150 AC106785.1-201ENST00000565935 262 ntBASIC4.61□□□□□ -1.67
RNF40O75150 RPL23AP91-201ENST00000569211 455 ntBASIC4.61□□□□□ -1.67
RNF40O75150 HMGN2P15-201ENST00000585707 270 ntBASIC4.61□□□□□ -1.67
RNF40O75150 AL160290.3-201ENST00000604869 165 ntBASIC4.61□□□□□ -1.67
RNF40O75150 RPL17P51-201ENST00000605218 238 ntBASIC4.61□□□□□ -1.67
RNF40O75150 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
RNF40O75150 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.61□□□□□ -1.67
RNF40O75150 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RNF40O75150 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.61□□□□□ -1.67
RNF40O75150 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.61□□□□□ -1.67
RNF40O75150 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RNF40O75150 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
RNF40O75150 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.6□□□□□ -1.67
RNF40O75150 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.6□□□□□ -1.67
RNF40O75150 AC103988.1-201ENST00000566382 2177 ntBASIC4.6□□□□□ -1.67
RNF40O75150 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RNF40O75150 RNA5SP307-201ENST00000362863 116 ntBASIC4.6□□□□□ -1.67
RNF40O75150 Y_RNA.796-201ENST00000364268 102 ntBASIC4.6□□□□□ -1.67
RNF40O75150 Y_RNA.799-201ENST00000364992 102 ntBASIC4.6□□□□□ -1.67
RNF40O75150 U3.15-201ENST00000365398 212 ntBASIC4.6□□□□□ -1.67
RNF40O75150 SNORA48.7-201ENST00000391302 135 ntBASIC4.6□□□□□ -1.67
RNF40O75150 HSPE1P12-201ENST00000412576 301 ntBASIC4.6□□□□□ -1.67
RNF40O75150 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.6□□□□□ -1.67
RNF40O75150 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC4.6□□□□□ -1.67
RNF40O75150 RPL27AP5-201ENST00000469428 449 ntBASIC4.6□□□□□ -1.67
RNF40O75150 AC091167.1-201ENST00000492017 396 ntBASIC4.6□□□□□ -1.67
RNF40O75150 AC078918.1-201ENST00000498515 228 ntBASIC4.6□□□□□ -1.67
RNF40O75150 AC010598.1-201ENST00000510378 103 ntBASIC4.6□□□□□ -1.67
RNF40O75150 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC4.6□□□□□ -1.67
RNF40O75150 RPL23AP97-201ENST00000568955 471 ntBASIC4.6□□□□□ -1.67
RNF40O75150 AC007546.2-201ENST00000623996 360 ntBASIC4.6□□□□□ -1.67
RNF40O75150 AC112200.1-201ENST00000625015 234 ntBASIC4.6□□□□□ -1.67
RNF40O75150 AL589743.1-201ENST00000551932 2712 ntBASIC4.6□□□□□ -1.67
RNF40O75150 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RNF40O75150 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RNF40O75150 AC026241.1-201ENST00000517873 2142 ntBASIC4.6□□□□□ -1.67
RNF40O75150 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.6□□□□□ -1.67
RNF40O75150 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RNF40O75150 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
RNF40O75150 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RNF40O75150 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RNF40O75150 Y_RNA.203-201ENST00000364106 102 ntBASIC4.59□□□□□ -1.67
RNF40O75150 Y_RNA.366-201ENST00000365540 102 ntBASIC4.59□□□□□ -1.67
RNF40O75150 MIR134-201ENST00000385258 73 ntBASIC4.59□□□□□ -1.67
RNF40O75150 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.59□□□□□ -1.67
RNF40O75150 RNA5SP511-201ENST00000410487 115 ntBASIC4.59□□□□□ -1.67
RNF40O75150 AC023141.4-201ENST00000412031 328 ntBASIC4.59□□□□□ -1.67
RNF40O75150 RNA5SP20-201ENST00000515976 84 ntBASIC4.59□□□□□ -1.67
RNF40O75150 SNORD115-40-201ENST00000606510 82 ntBASIC4.59□□□□□ -1.67
RNF40O75150 MIR3653-201ENST00000625572 110 ntBASIC4.59□□□□□ -1.67
RNF40O75150 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RNF40O75150 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
RNF40O75150 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.68
RNF40O75150 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
RNF40O75150 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.68
RNF40O75150 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.68
RNF40O75150 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RNF40O75150 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RNF40O75150 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.58□□□□□ -1.68
RNF40O75150 RNU6-228P-201ENST00000362700 106 ntBASIC4.58□□□□□ -1.68
RNF40O75150 Y_RNA.78-201ENST00000362970 110 ntBASIC4.58□□□□□ -1.68
RNF40O75150 RNA5SP366-201ENST00000365454 123 ntBASIC4.58□□□□□ -1.68
RNF40O75150 Y_RNA.362-201ENST00000365518 110 ntBASIC4.58□□□□□ -1.68
RNF40O75150 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
RNF40O75150 Y_RNA.466-201ENST00000384294 113 ntBASIC4.58□□□□□ -1.68
RNF40O75150 Y_RNA.486-201ENST00000384398 107 ntBASIC4.58□□□□□ -1.68
RNF40O75150 RNU6-813P-201ENST00000384691 107 ntBASIC4.58□□□□□ -1.68
RNF40O75150 SNORA74C-2-201ENST00000411179 201 ntBASIC4.58□□□□□ -1.68
RNF40O75150 AL353705.1-201ENST00000433468 480 ntBASIC4.58□□□□□ -1.68
RNF40O75150 RNA5SP497-201ENST00000516081 97 ntBASIC4.58□□□□□ -1.68
RNF40O75150 RNU6-1146P-201ENST00000516282 102 ntBASIC4.58□□□□□ -1.68
RNF40O75150 RNU6-126P-201ENST00000516685 103 ntBASIC4.58□□□□□ -1.68
RNF40O75150 RNU7-149P-201ENST00000516739 59 ntBASIC4.58□□□□□ -1.68
RNF40O75150 AL360157.1-201ENST00000565962 87 ntBASIC4.58□□□□□ -1.68
RNF40O75150 MIR4662B-201ENST00000579498 81 ntBASIC4.58□□□□□ -1.68
RNF40O75150 AL137067.1-201ENST00000615933 120 ntBASIC4.58□□□□□ -1.68
RNF40O75150 5S_rRNA.11-201ENST00000618635 84 ntBASIC4.58□□□□□ -1.68
RNF40O75150 AC010680.1-201ENST00000590024 3590 ntBASIC4.58□□□□□ -1.68
RNF40O75150 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
RNF40O75150 FAM35BP-202ENST00000497389 3337 ntBASIC4.58□□□□□ -1.68
RNF40O75150 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.58□□□□□ -1.68
RNF40O75150 MFSD8-242ENST00000641690 4199 ntBASIC4.58□□□□□ -1.68
RNF40O75150 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RNF40O75150 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.58□□□□□ -1.68
RNF40O75150 Z73965.1-201ENST00000623412 2297 ntBASIC4.57□□□□□ -1.68
RNF40O75150 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
RNF40O75150 MIR494-201ENST00000349529 81 ntBASIC4.57□□□□□ -1.68
RNF40O75150 SNORA1-201ENST00000384107 130 ntBASIC4.57□□□□□ -1.68
RNF40O75150 AC245291.1-201ENST00000419501 328 ntBASIC4.57□□□□□ -1.68
RNF40O75150 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.57□□□□□ -1.68
RNF40O75150 ABCF2P2-201ENST00000450549 296 ntBASIC4.57□□□□□ -1.68
RNF40O75150 RNU6-221P-201ENST00000459541 99 ntBASIC4.57□□□□□ -1.68
RNF40O75150 AC093663.1-201ENST00000497190 394 ntBASIC4.57□□□□□ -1.68
RNF40O75150 KRTAP13-6P-201ENST00000508999 371 ntBASIC4.57□□□□□ -1.68
RNF40O75150 HIGD1AP1-201ENST00000550979 275 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms