Protein–RNA interactions for Protein: O60749

SNX2, Sorting nexin-2, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2O60749 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
SNX2O60749 MIR208B-201ENST00000401172 77 ntBASIC2.77□□□□□ -1.97
SNX2O60749 AL590004.2-201ENST00000404787 371 ntBASIC2.77□□□□□ -1.97
SNX2O60749 RNA5SP201-201ENST00000410316 124 ntBASIC2.77□□□□□ -1.97
SNX2O60749 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.77□□□□□ -1.97
SNX2O60749 AC114482.1-201ENST00000418010 247 ntBASIC2.77□□□□□ -1.97
SNX2O60749 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.77□□□□□ -1.97
SNX2O60749 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.77□□□□□ -1.97
SNX2O60749 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.77□□□□□ -1.97
SNX2O60749 AC145146.1-201ENST00000496370 254 ntBASIC2.77□□□□□ -1.97
SNX2O60749 RN7SKP132-201ENST00000516001 208 ntBASIC2.77□□□□□ -1.97
SNX2O60749 RNU6-58P-201ENST00000517143 103 ntBASIC2.77□□□□□ -1.97
SNX2O60749 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.77□□□□□ -1.97
SNX2O60749 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SNX2O60749 MIR3605-201ENST00000583214 100 ntBASIC2.77□□□□□ -1.97
SNX2O60749 VN1R91P-201ENST00000594377 169 ntBASIC2.77□□□□□ -1.97
SNX2O60749 AC008737.2-201ENST00000599446 118 ntBASIC2.77□□□□□ -1.97
SNX2O60749 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
SNX2O60749 AC092593.1-201ENST00000515413 1815 ntBASIC2.77□□□□□ -1.97
SNX2O60749 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
SNX2O60749 MIR26A1-201ENST00000362205 77 ntBASIC2.76□□□□□ -1.97
SNX2O60749 RNU6-1159P-201ENST00000362933 107 ntBASIC2.76□□□□□ -1.97
SNX2O60749 Y_RNA.319-201ENST00000365138 92 ntBASIC2.76□□□□□ -1.97
SNX2O60749 AC117470.1-201ENST00000381974 330 ntBASIC2.76□□□□□ -1.97
SNX2O60749 RNA5SP213-201ENST00000391031 106 ntBASIC2.76□□□□□ -1.97
SNX2O60749 RNU6-985P-201ENST00000410182 104 ntBASIC2.76□□□□□ -1.97
SNX2O60749 RPS26P42-201ENST00000413485 326 ntBASIC2.76□□□□□ -1.97
SNX2O60749 AL590556.1-201ENST00000423231 483 ntBASIC2.76□□□□□ -1.97
SNX2O60749 WARS2P1-201ENST00000429678 537 ntBASIC2.76□□□□□ -1.97
SNX2O60749 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.76□□□□□ -1.97
SNX2O60749 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.76□□□□□ -1.97
SNX2O60749 AC009238.1-201ENST00000442165 424 ntBASIC2.76□□□□□ -1.97
SNX2O60749 AC009237.6-201ENST00000446969 424 ntBASIC2.76□□□□□ -1.97
SNX2O60749 AC107032.1-201ENST00000485945 480 ntBASIC2.76□□□□□ -1.97
SNX2O60749 AC132942.1-201ENST00000486753 483 ntBASIC2.76□□□□□ -1.97
SNX2O60749 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.76□□□□□ -1.97
SNX2O60749 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.76□□□□□ -1.97
SNX2O60749 RNU6-475P-201ENST00000516073 104 ntBASIC2.76□□□□□ -1.97
SNX2O60749 RNU6-1045P-201ENST00000516321 107 ntBASIC2.76□□□□□ -1.97
SNX2O60749 RNU6-1046P-201ENST00000516538 107 ntBASIC2.76□□□□□ -1.97
SNX2O60749 RNU6-567P-201ENST00000516746 107 ntBASIC2.76□□□□□ -1.97
SNX2O60749 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.76□□□□□ -1.97
SNX2O60749 AC004486.1-201ENST00000546846 233 ntBASIC2.76□□□□□ -1.97
SNX2O60749 AC090617.3-201ENST00000573670 475 ntBASIC2.76□□□□□ -1.97
SNX2O60749 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.76□□□□□ -1.97
SNX2O60749 ZNF861P-201ENST00000588126 639 ntBASIC2.76□□□□□ -1.97
SNX2O60749 PCGEM1.1-201ENST00000613431 131 ntBASIC2.76□□□□□ -1.97
SNX2O60749 AC005520.5-201ENST00000613926 164 ntBASIC2.76□□□□□ -1.97
SNX2O60749 AC245884.12-201ENST00000615364 59 ntBASIC2.76□□□□□ -1.97
SNX2O60749 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.76□□□□□ -1.97
SNX2O60749 AC137590.2-201ENST00000619709 240 ntBASIC2.76□□□□□ -1.97
SNX2O60749 MIR6852-201ENST00000621699 66 ntBASIC2.76□□□□□ -1.97
SNX2O60749 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.76□□□□□ -1.97
SNX2O60749 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
SNX2O60749 RNU4-56P-201ENST00000364700 142 ntBASIC2.75□□□□□ -1.97
SNX2O60749 RNU6-823P-201ENST00000391042 103 ntBASIC2.75□□□□□ -1.97
SNX2O60749 SNORA12-201ENST00000391162 147 ntBASIC2.75□□□□□ -1.97
SNX2O60749 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.75□□□□□ -1.97
SNX2O60749 USP9YP16-201ENST00000430287 407 ntBASIC2.75□□□□□ -1.97
SNX2O60749 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.75□□□□□ -1.97
SNX2O60749 USP9YP23-201ENST00000455085 407 ntBASIC2.75□□□□□ -1.97
SNX2O60749 SNORA59A-201ENST00000459326 152 ntBASIC2.75□□□□□ -1.97
SNX2O60749 AC003982.1-202ENST00000469928 248 ntBASIC2.75□□□□□ -1.97
SNX2O60749 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.75□□□□□ -1.97
SNX2O60749 SNORA40.14-201ENST00000516543 86 ntBASIC2.75□□□□□ -1.97
SNX2O60749 RNU6-586P-201ENST00000517265 104 ntBASIC2.75□□□□□ -1.97
SNX2O60749 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.75□□□□□ -1.97
SNX2O60749 AC016727.2-201ENST00000603988 621 ntBASIC2.75□□□□□ -1.97
SNX2O60749 AL670379.2-201ENST00000604983 252 ntBASIC2.75□□□□□ -1.97
SNX2O60749 MIR203B-201ENST00000636080 86 ntBASIC2.75□□□□□ -1.97
SNX2O60749 Z82195.2-201ENST00000612348 18351 ntBASIC2.74□□□□□ -1.97
SNX2O60749 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.74□□□□□ -1.97
SNX2O60749 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.74□□□□□ -1.97
SNX2O60749 ZNF271P-202ENST00000465539 1970 ntBASIC2.74□□□□□ -1.97
SNX2O60749 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.74□□□□□ -1.97
SNX2O60749 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SNX2O60749 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.74□□□□□ -1.97
SNX2O60749 Y_RNA.145-201ENST00000363527 102 ntBASIC2.74□□□□□ -1.97
SNX2O60749 Y_RNA.389-201ENST00000383924 113 ntBASIC2.74□□□□□ -1.97
SNX2O60749 Y_RNA.455-201ENST00000384230 98 ntBASIC2.74□□□□□ -1.97
SNX2O60749 RNU6-541P-201ENST00000384709 110 ntBASIC2.74□□□□□ -1.97
SNX2O60749 MIR10B-201ENST00000385011 110 ntBASIC2.74□□□□□ -1.97
SNX2O60749 SNORA46.1-201ENST00000391069 153 ntBASIC2.74□□□□□ -1.97
SNX2O60749 RNU6-159P-201ENST00000391080 106 ntBASIC2.74□□□□□ -1.97
SNX2O60749 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.74□□□□□ -1.97
SNX2O60749 EIF1P2-201ENST00000428233 350 ntBASIC2.74□□□□□ -1.97
SNX2O60749 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.74□□□□□ -1.97
SNX2O60749 AC011753.1-201ENST00000451001 220 ntBASIC2.74□□□□□ -1.97
SNX2O60749 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.74□□□□□ -1.97
SNX2O60749 RNA5SP356-201ENST00000515972 94 ntBASIC2.74□□□□□ -1.97
SNX2O60749 RNU6-764P-201ENST00000516396 105 ntBASIC2.74□□□□□ -1.97
SNX2O60749 Y_RNA.720-201ENST00000517166 92 ntBASIC2.74□□□□□ -1.97
SNX2O60749 AC022868.1-201ENST00000517767 391 ntBASIC2.74□□□□□ -1.97
SNX2O60749 AC040926.1-201ENST00000530195 238 ntBASIC2.74□□□□□ -1.97
SNX2O60749 AC079600.2-201ENST00000550076 130 ntBASIC2.74□□□□□ -1.97
SNX2O60749 AC113195.1-201ENST00000579952 141 ntBASIC2.74□□□□□ -1.97
SNX2O60749 AC090517.3-201ENST00000625170 141 ntBASIC2.74□□□□□ -1.97
SNX2O60749 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
SNX2O60749 AC069528.2-201ENST00000624849 1991 ntBASIC2.74□□□□□ -1.97
SNX2O60749 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms