Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
SGCEO43556 RNU6-1097P-201ENST00000363586 107 ntBASIC0.7□□□□□ -2.3
SGCEO43556 RNU6-1031P-201ENST00000384773 107 ntBASIC0.7□□□□□ -2.3
SGCEO43556 MIR200A-201ENST00000384875 90 ntBASIC0.7□□□□□ -2.3
SGCEO43556 SNORD70.1-201ENST00000391007 85 ntBASIC0.7□□□□□ -2.3
SGCEO43556 MIR1253-201ENST00000408273 105 ntBASIC0.7□□□□□ -2.3
SGCEO43556 RNU6-1054P-201ENST00000411293 104 ntBASIC0.7□□□□□ -2.3
SGCEO43556 SSR1P2-201ENST00000415208 787 ntBASIC0.7□□□□□ -2.3
SGCEO43556 AL606490.4-201ENST00000423117 127 ntBASIC0.7□□□□□ -2.3
SGCEO43556 UBE2D3P4-201ENST00000441973 436 ntBASIC0.7□□□□□ -2.3
SGCEO43556 AL162395.1-201ENST00000457882 422 ntBASIC0.7□□□□□ -2.3
SGCEO43556 AC103851.1-201ENST00000506833 274 ntBASIC0.7□□□□□ -2.3
SGCEO43556 PDCD5P2-201ENST00000507570 312 ntBASIC0.7□□□□□ -2.3
SGCEO43556 SNORA31.2-201ENST00000516019 134 ntBASIC0.7□□□□□ -2.3
SGCEO43556 RNU2-69P-201ENST00000516061 100 ntBASIC0.7□□□□□ -2.3
SGCEO43556 SNORD27.1-201ENST00000516319 72 ntBASIC0.7□□□□□ -2.3
SGCEO43556 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.7□□□□□ -2.3
SGCEO43556 AC136628.3-201ENST00000521868 290 ntBASIC0.7□□□□□ -2.3
SGCEO43556 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.7□□□□□ -2.3
SGCEO43556 AC008015.1-201ENST00000555505 465 ntBASIC0.7□□□□□ -2.3
SGCEO43556 AL391840.1-201ENST00000571144 367 ntBASIC0.7□□□□□ -2.3
SGCEO43556 MTND1P8-201ENST00000571424 950 ntBASIC0.7□□□□□ -2.3
SGCEO43556 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC0.7□□□□□ -2.3
SGCEO43556 AC104458.1-201ENST00000608243 463 ntBASIC0.7□□□□□ -2.3
SGCEO43556 AC008163.1-202ENST00000636004 2889 ntBASIC0.7□□□□□ -2.3
SGCEO43556 RNU6-1029P-201ENST00000384109 107 ntBASIC0.69□□□□□ -2.3
SGCEO43556 RNU6-74P-201ENST00000384235 107 ntBASIC0.69□□□□□ -2.3
SGCEO43556 MIR608-201ENST00000384820 100 ntBASIC0.69□□□□□ -2.3
SGCEO43556 RN7SKP200-201ENST00000410564 320 ntBASIC0.69□□□□□ -2.3
SGCEO43556 HMGN1P14-201ENST00000412459 517 ntBASIC0.69□□□□□ -2.3
SGCEO43556 CDK8P2-201ENST00000415020 547 ntBASIC0.69□□□□□ -2.3
SGCEO43556 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC0.69□□□□□ -2.3
SGCEO43556 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC0.69□□□□□ -2.3
SGCEO43556 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC0.69□□□□□ -2.3
SGCEO43556 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC0.69□□□□□ -2.3
SGCEO43556 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.69□□□□□ -2.3
SGCEO43556 AC025423.5-201ENST00000550230 219 ntBASIC0.69□□□□□ -2.3
SGCEO43556 TCL6_2.1-201ENST00000615162 119 ntBASIC0.69□□□□□ -2.3
SGCEO43556 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.69□□□□□ -2.3
SGCEO43556 AL078595.3-201ENST00000623815 1166 ntBASIC0.69□□□□□ -2.3
SGCEO43556 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.69□□□□□ -2.3
SGCEO43556 MIR6767-201ENST00000637302 66 ntBASIC0.69□□□□□ -2.3
SGCEO43556 MIR6866-201ENST00000638146 69 ntBASIC0.69□□□□□ -2.3
SGCEO43556 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
SGCEO43556 SNORA33-201ENST00000363664 130 ntBASIC0.68□□□□□ -2.3
SGCEO43556 RNU6-417P-201ENST00000384712 107 ntBASIC0.68□□□□□ -2.3
SGCEO43556 RNU6-1106P-201ENST00000390845 107 ntBASIC0.68□□□□□ -2.3
SGCEO43556 RNA5SP109-201ENST00000391010 116 ntBASIC0.68□□□□□ -2.3
SGCEO43556 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.68□□□□□ -2.3
SGCEO43556 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC0.68□□□□□ -2.3
SGCEO43556 AC002429.1-201ENST00000437672 148 ntBASIC0.68□□□□□ -2.3
SGCEO43556 AC004854.1-201ENST00000440356 349 ntBASIC0.68□□□□□ -2.3
SGCEO43556 AC016717.1-201ENST00000448918 286 ntBASIC0.68□□□□□ -2.3
SGCEO43556 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC0.68□□□□□ -2.3
SGCEO43556 GMFBP1-201ENST00000467831 427 ntBASIC0.68□□□□□ -2.3
SGCEO43556 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC0.68□□□□□ -2.3
SGCEO43556 FABP5P5-201ENST00000515537 406 ntBASIC0.68□□□□□ -2.3
SGCEO43556 TPRKBP2-201ENST00000565969 475 ntBASIC0.68□□□□□ -2.3
SGCEO43556 MIR5006-201ENST00000583027 110 ntBASIC0.68□□□□□ -2.3
SGCEO43556 AC068790.6-201ENST00000602558 258 ntBASIC0.68□□□□□ -2.3
SGCEO43556 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.68□□□□□ -2.3
SGCEO43556 AC002044.1-201ENST00000606707 158 ntBASIC0.68□□□□□ -2.3
SGCEO43556 AC108706.1-201ENST00000611053 297 ntBASIC0.68□□□□□ -2.3
SGCEO43556 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.68□□□□□ -2.3
SGCEO43556 MIR96-201ENST00000362288 78 ntBASIC0.67□□□□□ -2.3
SGCEO43556 RNU6-266P-201ENST00000364225 107 ntBASIC0.67□□□□□ -2.3
SGCEO43556 RNU6-108P-201ENST00000365558 107 ntBASIC0.67□□□□□ -2.3
SGCEO43556 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.67□□□□□ -2.3
SGCEO43556 ISCA1P6-201ENST00000427740 390 ntBASIC0.67□□□□□ -2.3
SGCEO43556 NFU1P2-201ENST00000448700 469 ntBASIC0.67□□□□□ -2.3
SGCEO43556 ZNF114P1-201ENST00000453500 292 ntBASIC0.67□□□□□ -2.3
SGCEO43556 SRRM1P2-201ENST00000464531 1192 ntBASIC0.67□□□□□ -2.3
SGCEO43556 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC0.67□□□□□ -2.3
SGCEO43556 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC0.67□□□□□ -2.3
SGCEO43556 RNA5SP168-201ENST00000516642 112 ntBASIC0.67□□□□□ -2.3
SGCEO43556 RN7SKP49-201ENST00000516675 260 ntBASIC0.67□□□□□ -2.3
SGCEO43556 RNU6-197P-201ENST00000516680 100 ntBASIC0.67□□□□□ -2.3
SGCEO43556 RNU1-142P-201ENST00000516682 145 ntBASIC0.67□□□□□ -2.3
SGCEO43556 AC090142.3-201ENST00000519012 385 ntBASIC0.67□□□□□ -2.3
SGCEO43556 DEFB131C-201ENST00000528817 165 ntBASIC0.67□□□□□ -2.3
SGCEO43556 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC0.67□□□□□ -2.3
SGCEO43556 MIR4781-201ENST00000585250 76 ntBASIC0.67□□□□□ -2.3
SGCEO43556 Z99497.2-201ENST00000603634 310 ntBASIC0.67□□□□□ -2.3
SGCEO43556 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.67□□□□□ -2.3
SGCEO43556 AC009541.1-201ENST00000438279 2662 ntBASIC0.67□□□□□ -2.3
SGCEO43556 MIR373-201ENST00000362273 69 ntBASIC0.66□□□□□ -2.3
SGCEO43556 Y_RNA.287-201ENST00000364853 94 ntBASIC0.66□□□□□ -2.3
SGCEO43556 SNORA16.2-201ENST00000390991 127 ntBASIC0.66□□□□□ -2.3
SGCEO43556 AC114482.1-201ENST00000418010 247 ntBASIC0.66□□□□□ -2.3
SGCEO43556 SNORD124-201ENST00000459577 104 ntBASIC0.66□□□□□ -2.3
SGCEO43556 AC048334.1-201ENST00000477975 159 ntBASIC0.66□□□□□ -2.3
SGCEO43556 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.66□□□□□ -2.3
SGCEO43556 MTCO3P23-201ENST00000561363 289 ntBASIC0.66□□□□□ -2.3
SGCEO43556 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.66□□□□□ -2.3
SGCEO43556 GHRLOS.1-201ENST00000610995 70 ntBASIC0.66□□□□□ -2.3
SGCEO43556 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.66□□□□□ -2.3
SGCEO43556 AC006001.4-201ENST00000622243 395 ntBASIC0.66□□□□□ -2.3
SGCEO43556 AC106754.1-201ENST00000562632 1513 ntBASIC0.65□□□□□ -2.31
SGCEO43556 RNY4P34-201ENST00000364779 95 ntBASIC0.65□□□□□ -2.31
SGCEO43556 RNU6-1127P-201ENST00000384580 107 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms