Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 AC104581.2-201ENST00000572227 430 ntBASIC2.13□□□□□ -2.07
TO15178 AC133104.2-201ENST00000615272 193 ntBASIC2.13□□□□□ -2.07
TO15178 MIR6766-201ENST00000622641 72 ntBASIC2.13□□□□□ -2.07
TO15178 MIR1248-201ENST00000629190 106 ntBASIC2.13□□□□□ -2.07
TO15178 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
TO15178 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.13□□□□□ -2.07
TO15178 RNU6-743P-201ENST00000364151 106 ntBASIC2.12□□□□□ -2.07
TO15178 RNU6-867P-201ENST00000364956 107 ntBASIC2.12□□□□□ -2.07
TO15178 U8.10-201ENST00000384260 133 ntBASIC2.12□□□□□ -2.07
TO15178 RNU6-301P-201ENST00000384277 107 ntBASIC2.12□□□□□ -2.07
TO15178 RNU6-331P-201ENST00000384724 107 ntBASIC2.12□□□□□ -2.07
TO15178 MTCYBP4-201ENST00000401524 249 ntBASIC2.12□□□□□ -2.07
TO15178 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.12□□□□□ -2.07
TO15178 WARS2P1-201ENST00000429678 537 ntBASIC2.12□□□□□ -2.07
TO15178 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.12□□□□□ -2.07
TO15178 RPS15AP28-201ENST00000435088 386 ntBASIC2.12□□□□□ -2.07
TO15178 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.12□□□□□ -2.07
TO15178 AL035666.1-201ENST00000446195 348 ntBASIC2.12□□□□□ -2.07
TO15178 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.12□□□□□ -2.07
TO15178 Y_RNA.653-201ENST00000459091 95 ntBASIC2.12□□□□□ -2.07
TO15178 RPS23P5-201ENST00000495419 428 ntBASIC2.12□□□□□ -2.07
TO15178 ANXA2P1-201ENST00000505539 926 ntBASIC2.12□□□□□ -2.07
TO15178 AC097473.1-201ENST00000508142 408 ntBASIC2.12□□□□□ -2.07
TO15178 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.12□□□□□ -2.07
TO15178 MTND3P22-201ENST00000510932 243 ntBASIC2.12□□□□□ -2.07
TO15178 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.12□□□□□ -2.07
TO15178 AC093303.1-201ENST00000514549 295 ntBASIC2.12□□□□□ -2.07
TO15178 RNU5F-4P-201ENST00000516581 114 ntBASIC2.12□□□□□ -2.07
TO15178 AP002770.2-201ENST00000543613 532 ntBASIC2.12□□□□□ -2.07
TO15178 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.12□□□□□ -2.07
TO15178 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.12□□□□□ -2.07
TO15178 AL355375.2-201ENST00000574825 175 ntBASIC2.12□□□□□ -2.07
TO15178 SNORD53-201ENST00000579969 78 ntBASIC2.12□□□□□ -2.07
TO15178 AC016727.2-201ENST00000603988 621 ntBASIC2.12□□□□□ -2.07
TO15178 SNRPGP20-201ENST00000604477 205 ntBASIC2.12□□□□□ -2.07
TO15178 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.12□□□□□ -2.07
TO15178 IGHVIII-44-202ENST00000636235 289 ntBASIC2.12□□□□□ -2.07
TO15178 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.12□□□□□ -2.07
TO15178 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
TO15178 RNY1P16-201ENST00000363063 111 ntBASIC2.11□□□□□ -2.07
TO15178 RNU6-137P-201ENST00000363680 108 ntBASIC2.11□□□□□ -2.07
TO15178 SNORD115-8-201ENST00000363856 82 ntBASIC2.11□□□□□ -2.07
TO15178 Y_RNA.259-201ENST00000364619 101 ntBASIC2.11□□□□□ -2.07
TO15178 SNORD115-38-201ENST00000365037 82 ntBASIC2.11□□□□□ -2.07
TO15178 Y_RNA.405-201ENST00000383979 100 ntBASIC2.11□□□□□ -2.07
TO15178 Y_RNA.451-201ENST00000384200 100 ntBASIC2.11□□□□□ -2.07
TO15178 RNU6-17P-201ENST00000384245 107 ntBASIC2.11□□□□□ -2.07
TO15178 RNU6-18P-201ENST00000384527 107 ntBASIC2.11□□□□□ -2.07
TO15178 Y_RNA.524-201ENST00000384564 100 ntBASIC2.11□□□□□ -2.07
TO15178 Y_RNA.561-201ENST00000384694 100 ntBASIC2.11□□□□□ -2.07
TO15178 RNU6-541P-201ENST00000384709 110 ntBASIC2.11□□□□□ -2.07
TO15178 SNORA12.2-201ENST00000391040 156 ntBASIC2.11□□□□□ -2.07
TO15178 RNU6-700P-201ENST00000391043 107 ntBASIC2.11□□□□□ -2.07
TO15178 SNORA11.2-201ENST00000408318 127 ntBASIC2.11□□□□□ -2.07
TO15178 RNU4-53P-201ENST00000410828 140 ntBASIC2.11□□□□□ -2.07
TO15178 SRIP3-201ENST00000413200 219 ntBASIC2.11□□□□□ -2.07
TO15178 AL356379.1-201ENST00000414105 126 ntBASIC2.11□□□□□ -2.07
TO15178 AC027124.2-201ENST00000428249 105 ntBASIC2.11□□□□□ -2.07
TO15178 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.11□□□□□ -2.07
TO15178 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.11□□□□□ -2.07
TO15178 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.11□□□□□ -2.07
TO15178 AC245102.2-201ENST00000448956 180 ntBASIC2.11□□□□□ -2.07
TO15178 AL137159.1-201ENST00000452808 512 ntBASIC2.11□□□□□ -2.07
TO15178 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.11□□□□□ -2.07
TO15178 RNA5SP281-201ENST00000516504 135 ntBASIC2.11□□□□□ -2.07
TO15178 SCARNA16.2-201ENST00000516520 172 ntBASIC2.11□□□□□ -2.07
TO15178 RNA5SP137-201ENST00000516833 135 ntBASIC2.11□□□□□ -2.07
TO15178 RNU6-1213P-201ENST00000517075 94 ntBASIC2.11□□□□□ -2.07
TO15178 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.11□□□□□ -2.07
TO15178 AL031274.2-201ENST00000599419 203 ntBASIC2.11□□□□□ -2.07
TO15178 AC100812.1-201ENST00000607622 580 ntBASIC2.11□□□□□ -2.07
TO15178 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.11□□□□□ -2.07
TO15178 AC005014.2-201ENST00000607795 599 ntBASIC2.11□□□□□ -2.07
TO15178 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.11□□□□□ -2.07
TO15178 AC005562.2-201ENST00000618264 111 ntBASIC2.11□□□□□ -2.07
TO15178 AL162373.1-201ENST00000620433 407 ntBASIC2.11□□□□□ -2.07
TO15178 BX322639.1-202ENST00000423987 2213 ntBASIC2.11□□□□□ -2.07
TO15178 RNU1-76P-201ENST00000362903 159 ntBASIC2.1□□□□□ -2.07
TO15178 RNU5E-4P-201ENST00000364931 120 ntBASIC2.1□□□□□ -2.07
TO15178 SNORA51.11-201ENST00000384442 131 ntBASIC2.1□□□□□ -2.07
TO15178 RNU6-310P-201ENST00000384655 107 ntBASIC2.1□□□□□ -2.07
TO15178 Y_RNA.646-201ENST00000410980 101 ntBASIC2.1□□□□□ -2.07
TO15178 MTCO2P27-201ENST00000420740 428 ntBASIC2.1□□□□□ -2.07
TO15178 MTCYBP10-201ENST00000424905 650 ntBASIC2.1□□□□□ -2.07
TO15178 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.1□□□□□ -2.07
TO15178 PRELID3BP1-201ENST00000457142 540 ntBASIC2.1□□□□□ -2.07
TO15178 RNU6-1098P-201ENST00000516772 96 ntBASIC2.1□□□□□ -2.07
TO15178 Y_RNA.706-201ENST00000516933 99 ntBASIC2.1□□□□□ -2.07
TO15178 MIR5701-3-201ENST00000578890 82 ntBASIC2.1□□□□□ -2.07
TO15178 MIR5701-1-201ENST00000585138 82 ntBASIC2.1□□□□□ -2.07
TO15178 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.1□□□□□ -2.07
TO15178 TCL6_2.1-201ENST00000615162 119 ntBASIC2.1□□□□□ -2.07
TO15178 MIR5701-2-201ENST00000615634 82 ntBASIC2.1□□□□□ -2.07
TO15178 AC112487.2-201ENST00000637950 304 ntBASIC2.1□□□□□ -2.07
TO15178 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
TO15178 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
TO15178 AL359851.1-201ENST00000569460 4997 ntBASIC2.09□□□□□ -2.07
TO15178 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
TO15178 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
TO15178 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 166.4 ms