Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 RN7SKP287-201ENST00000516546 266 ntBASIC-0.41□□□□□ -2.48
CHD1O14646 RNU5F-4P-201ENST00000516581 114 ntBASIC-0.41□□□□□ -2.48
CHD1O14646 MTND1P36-201ENST00000522384 936 ntBASIC-0.41□□□□□ -2.48
CHD1O14646 AC011979.2-201ENST00000527568 352 ntBASIC-0.41□□□□□ -2.48
CHD1O14646 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC-0.41□□□□□ -2.48
CHD1O14646 MIR4666A-201ENST00000580160 79 ntBASIC-0.41□□□□□ -2.48
CHD1O14646 AC080078.2-201ENST00000603766 501 ntBASIC-0.41□□□□□ -2.48
CHD1O14646 AC090517.2-201ENST00000614966 680 ntBASIC-0.41□□□□□ -2.48
CHD1O14646 U6.42-201ENST00000618440 107 ntBASIC-0.41□□□□□ -2.48
CHD1O14646 AC231657.1-201ENST00000624313 397 ntBASIC-0.41□□□□□ -2.48
CHD1O14646 AL157786.1-207ENST00000627771 695 ntBASIC-0.41□□□□□ -2.48
CHD1O14646 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC-0.42□□□□□ -2.48
CHD1O14646 RNU6-199P-201ENST00000362954 107 ntBASIC-0.42□□□□□ -2.48
CHD1O14646 Y_RNA.203-201ENST00000364106 102 ntBASIC-0.42□□□□□ -2.48
CHD1O14646 RNU4-76P-201ENST00000364509 141 ntBASIC-0.42□□□□□ -2.48
CHD1O14646 RNU6-1031P-201ENST00000384773 107 ntBASIC-0.42□□□□□ -2.48
CHD1O14646 MIR106A-201ENST00000384870 81 ntBASIC-0.42□□□□□ -2.48
CHD1O14646 MTCO2P8-201ENST00000412213 658 ntBASIC-0.42□□□□□ -2.48
CHD1O14646 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC-0.42□□□□□ -2.48
CHD1O14646 AC245047.8-201ENST00000456455 284 ntBASIC-0.42□□□□□ -2.48
CHD1O14646 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.42□□□□□ -2.48
CHD1O14646 AP001189.2-201ENST00000527320 189 ntBASIC-0.42□□□□□ -2.48
CHD1O14646 AL355297.3-201ENST00000604082 446 ntBASIC-0.42□□□□□ -2.48
CHD1O14646 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.42□□□□□ -2.48
CHD1O14646 MTND5P32-201ENST00000560711 1802 ntBASIC-0.42□□□□□ -2.48
CHD1O14646 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC-0.43□□□□□ -2.48
CHD1O14646 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC-0.43□□□□□ -2.48
CHD1O14646 RNA5SP275-201ENST00000363936 118 ntBASIC-0.43□□□□□ -2.48
CHD1O14646 SNORD32B-201ENST00000364460 84 ntBASIC-0.43□□□□□ -2.48
CHD1O14646 MIR544A-201ENST00000384855 91 ntBASIC-0.43□□□□□ -2.48
CHD1O14646 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.43□□□□□ -2.48
CHD1O14646 AL603865.2-201ENST00000401679 213 ntBASIC-0.43□□□□□ -2.48
CHD1O14646 Y_RNA.623-201ENST00000411128 95 ntBASIC-0.43□□□□□ -2.48
CHD1O14646 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC-0.43□□□□□ -2.48
CHD1O14646 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC-0.43□□□□□ -2.48
CHD1O14646 SNORA70.12-201ENST00000516084 153 ntBASIC-0.43□□□□□ -2.48
CHD1O14646 RNU6-1315P-201ENST00000517187 99 ntBASIC-0.43□□□□□ -2.48
CHD1O14646 AC115990.1-201ENST00000526957 301 ntBASIC-0.43□□□□□ -2.48
CHD1O14646 AC004223.2-201ENST00000590309 544 ntBASIC-0.43□□□□□ -2.48
CHD1O14646 AL606834.3-201ENST00000602615 496 ntBASIC-0.43□□□□□ -2.48
CHD1O14646 uc_338.36-201ENST00000622331 158 ntBASIC-0.43□□□□□ -2.48
CHD1O14646 RNU4-15P-201ENST00000362613 141 ntBASIC-0.44□□□□□ -2.48
CHD1O14646 SNORD51.1-201ENST00000365405 77 ntBASIC-0.44□□□□□ -2.48
CHD1O14646 RNU6-796P-201ENST00000391086 107 ntBASIC-0.44□□□□□ -2.48
CHD1O14646 FCF1P10-201ENST00000407590 479 ntBASIC-0.44□□□□□ -2.48
CHD1O14646 EEF1E1P1-201ENST00000446998 430 ntBASIC-0.44□□□□□ -2.48
CHD1O14646 AC022447.4-201ENST00000504053 364 ntBASIC-0.44□□□□□ -2.48
CHD1O14646 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC-0.44□□□□□ -2.48
CHD1O14646 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC-0.44□□□□□ -2.48
CHD1O14646 AC027419.1-201ENST00000522976 328 ntBASIC-0.44□□□□□ -2.48
CHD1O14646 AC112693.2-201ENST00000556538 232 ntBASIC-0.44□□□□□ -2.48
CHD1O14646 AC112487.2-201ENST00000637950 304 ntBASIC-0.44□□□□□ -2.48
CHD1O14646 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC-0.44□□□□□ -2.48
CHD1O14646 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC-0.44□□□□□ -2.48
CHD1O14646 MTATP6P23-201ENST00000440153 476 ntBASIC-0.44□□□□□ -2.48
CHD1O14646 RNU6-953P-201ENST00000459154 107 ntBASIC-0.44□□□□□ -2.48
CHD1O14646 AC109445.1-201ENST00000512356 383 ntBASIC-0.44□□□□□ -2.48
CHD1O14646 AC087685.1-201ENST00000587507 141 ntBASIC-0.44□□□□□ -2.48
CHD1O14646 SNORD114-5-201ENST00000362928 70 ntBASIC-0.45□□□□□ -2.48
CHD1O14646 RNU6-1285P-201ENST00000363480 105 ntBASIC-0.45□□□□□ -2.48
CHD1O14646 RNA5SP128-201ENST00000365305 116 ntBASIC-0.45□□□□□ -2.48
CHD1O14646 SNORD114-12-201ENST00000365400 75 ntBASIC-0.45□□□□□ -2.48
CHD1O14646 RNU6-575P-201ENST00000411326 105 ntBASIC-0.45□□□□□ -2.48
CHD1O14646 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC-0.45□□□□□ -2.48
CHD1O14646 AC093899.1-201ENST00000457984 376 ntBASIC-0.45□□□□□ -2.48
CHD1O14646 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC-0.45□□□□□ -2.48
CHD1O14646 AC024995.1-201ENST00000523014 93 ntBASIC-0.45□□□□□ -2.48
CHD1O14646 LRRC6P1-201ENST00000532188 885 ntBASIC-0.45□□□□□ -2.48
CHD1O14646 AL133153.1-201ENST00000557756 303 ntBASIC-0.45□□□□□ -2.48
CHD1O14646 AC138749.5-201ENST00000611461 208 ntBASIC-0.45□□□□□ -2.48
CHD1O14646 AL513423.1-201ENST00000621695 132 ntBASIC-0.45□□□□□ -2.48
CHD1O14646 SNORD115-24-201ENST00000363528 82 ntBASIC-0.46□□□□□ -2.48
CHD1O14646 RNU4-56P-201ENST00000364700 142 ntBASIC-0.46□□□□□ -2.48
CHD1O14646 SNORA40.8-201ENST00000411034 126 ntBASIC-0.46□□□□□ -2.48
CHD1O14646 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC-0.46□□□□□ -2.48
CHD1O14646 MTND2P6-201ENST00000455337 1030 ntBASIC-0.46□□□□□ -2.48
CHD1O14646 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC-0.46□□□□□ -2.48
CHD1O14646 AC074133.1-201ENST00000515696 183 ntBASIC-0.46□□□□□ -2.48
CHD1O14646 MTND4LP26-201ENST00000518144 282 ntBASIC-0.46□□□□□ -2.48
CHD1O14646 AC131055.1-201ENST00000584626 316 ntBASIC-0.46□□□□□ -2.48
CHD1O14646 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC-0.46□□□□□ -2.48
CHD1O14646 RPL17P51-201ENST00000605218 238 ntBASIC-0.46□□□□□ -2.48
CHD1O14646 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC-0.46□□□□□ -2.48
CHD1O14646 RNA5SP323-201ENST00000391094 133 ntBASIC-0.47□□□□□ -2.48
CHD1O14646 AL359634.1-202ENST00000404721 284 ntBASIC-0.47□□□□□ -2.48
CHD1O14646 AC096531.1-201ENST00000419107 107 ntBASIC-0.47□□□□□ -2.48
CHD1O14646 AL139396.1-201ENST00000421137 167 ntBASIC-0.47□□□□□ -2.48
CHD1O14646 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC-0.47□□□□□ -2.48
CHD1O14646 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC-0.47□□□□□ -2.48
CHD1O14646 RNU7-136P-201ENST00000458819 69 ntBASIC-0.47□□□□□ -2.48
CHD1O14646 AC010531.2-201ENST00000465012 153 ntBASIC-0.47□□□□□ -2.48
CHD1O14646 AC022868.1-201ENST00000517767 391 ntBASIC-0.47□□□□□ -2.48
CHD1O14646 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC-0.47□□□□□ -2.48
CHD1O14646 AC120349.2-201ENST00000625002 298 ntBASIC-0.47□□□□□ -2.48
CHD1O14646 MIR1-1-201ENST00000362147 71 ntBASIC-0.47□□□□□ -2.49
CHD1O14646 SNORD56.1-201ENST00000362913 68 ntBASIC-0.47□□□□□ -2.49
CHD1O14646 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.47□□□□□ -2.49
CHD1O14646 SNORD113.3-201ENST00000364630 78 ntBASIC-0.47□□□□□ -2.49
CHD1O14646 SNORA2.2-201ENST00000365473 135 ntBASIC-0.47□□□□□ -2.49
CHD1O14646 RNU6-549P-201ENST00000384433 107 ntBASIC-0.47□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 131.9 ms