Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 RNU6-667P-201ENST00000517186 102 ntBASIC2.09□□□□□ -2.07
O00370 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.09□□□□□ -2.07
O00370 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
O00370 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.09□□□□□ -2.07
O00370 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.09□□□□□ -2.07
O00370 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.09□□□□□ -2.07
O00370 AL355073.2-201ENST00000612106 557 ntBASIC2.09□□□□□ -2.07
O00370 WT1-AS_8.1-201ENST00000615200 275 ntBASIC2.09□□□□□ -2.07
O00370 Y_RNA.804-201ENST00000615262 101 ntBASIC2.09□□□□□ -2.07
O00370 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.09□□□□□ -2.07
O00370 AC022306.2-201ENST00000617563 647 ntBASIC2.09□□□□□ -2.07
O00370 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.09□□□□□ -2.07
O00370 AL450472.1-202ENST00000637286 180 ntBASIC2.09□□□□□ -2.07
O00370 MTND5P9-201ENST00000503854 1755 ntBASIC2.08□□□□□ -2.08
O00370 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
O00370 Y_RNA.88-201ENST00000363029 99 ntBASIC2.08□□□□□ -2.08
O00370 RNU6-1286P-201ENST00000383871 107 ntBASIC2.08□□□□□ -2.08
O00370 RNU6-378P-201ENST00000384324 107 ntBASIC2.08□□□□□ -2.08
O00370 AL512604.1-201ENST00000404812 257 ntBASIC2.08□□□□□ -2.08
O00370 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.08□□□□□ -2.08
O00370 AC012306.1-201ENST00000423267 114 ntBASIC2.08□□□□□ -2.08
O00370 HMGN2P19-201ENST00000425149 265 ntBASIC2.08□□□□□ -2.08
O00370 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.08□□□□□ -2.08
O00370 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.08□□□□□ -2.08
O00370 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.08□□□□□ -2.08
O00370 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.08□□□□□ -2.08
O00370 CYP4A27P-201ENST00000567218 190 ntBASIC2.08□□□□□ -2.08
O00370 MIR4524B-201ENST00000581569 115 ntBASIC2.08□□□□□ -2.08
O00370 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.08□□□□□ -2.08
O00370 AC008749.1-201ENST00000597650 306 ntBASIC2.08□□□□□ -2.08
O00370 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.08□□□□□ -2.08
O00370 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.08□□□□□ -2.08
O00370 MTND4P12-201ENST00000498999 1377 ntBASIC2.08□□□□□ -2.08
O00370 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.07□□□□□ -2.08
O00370 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
O00370 SNORD50.1-201ENST00000362987 71 ntBASIC2.07□□□□□ -2.08
O00370 Y_RNA.142-201ENST00000363491 102 ntBASIC2.07□□□□□ -2.08
O00370 Y_RNA.166-201ENST00000363730 102 ntBASIC2.07□□□□□ -2.08
O00370 RNY3P14-201ENST00000384309 102 ntBASIC2.07□□□□□ -2.08
O00370 Y_RNA.533-201ENST00000384596 114 ntBASIC2.07□□□□□ -2.08
O00370 SNORA26.3-201ENST00000391119 136 ntBASIC2.07□□□□□ -2.08
O00370 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC2.07□□□□□ -2.08
O00370 AC096920.1-201ENST00000423991 241 ntBASIC2.07□□□□□ -2.08
O00370 RPL23AP50-201ENST00000434149 455 ntBASIC2.07□□□□□ -2.08
O00370 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.07□□□□□ -2.08
O00370 Y_RNA.635-201ENST00000459041 101 ntBASIC2.07□□□□□ -2.08
O00370 AC087477.1-201ENST00000465747 340 ntBASIC2.07□□□□□ -2.08
O00370 RPL7P42-201ENST00000481005 679 ntBASIC2.07□□□□□ -2.08
O00370 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.07□□□□□ -2.08
O00370 AC018868.1-201ENST00000491307 315 ntBASIC2.07□□□□□ -2.08
O00370 AF186996.7-201ENST00000492781 209 ntBASIC2.07□□□□□ -2.08
O00370 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.07□□□□□ -2.08
O00370 RNU6-1213P-201ENST00000517075 94 ntBASIC2.07□□□□□ -2.08
O00370 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.07□□□□□ -2.08
O00370 AC090517.1-201ENST00000569307 266 ntBASIC2.07□□□□□ -2.08
O00370 UBE2V2P2-201ENST00000587677 504 ntBASIC2.07□□□□□ -2.08
O00370 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.07□□□□□ -2.08
O00370 AC009229.3-201ENST00000608056 282 ntBASIC2.07□□□□□ -2.08
O00370 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.07□□□□□ -2.08
O00370 PISRT1.1-201ENST00000616930 107 ntBASIC2.07□□□□□ -2.08
O00370 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.07□□□□□ -2.08
O00370 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
O00370 AC245060.5-201ENST00000610778 3293 ntBASIC2.07□□□□□ -2.08
O00370 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
O00370 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.06□□□□□ -2.08
O00370 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.06□□□□□ -2.08
O00370 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.06□□□□□ -2.08
O00370 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
O00370 SNORD114-1-201ENST00000362705 72 ntBASIC2.06□□□□□ -2.08
O00370 U3.9-201ENST00000363823 204 ntBASIC2.06□□□□□ -2.08
O00370 Y_RNA.356-201ENST00000365475 113 ntBASIC2.06□□□□□ -2.08
O00370 RNU6-784P-201ENST00000384330 106 ntBASIC2.06□□□□□ -2.08
O00370 MIR487A-201ENST00000385009 80 ntBASIC2.06□□□□□ -2.08
O00370 MIR1294-201ENST00000408503 142 ntBASIC2.06□□□□□ -2.08
O00370 Y_RNA.594-201ENST00000410373 140 ntBASIC2.06□□□□□ -2.08
O00370 RNU6-370P-201ENST00000411008 104 ntBASIC2.06□□□□□ -2.08
O00370 AL445305.1-201ENST00000432577 575 ntBASIC2.06□□□□□ -2.08
O00370 AL353997.1-201ENST00000432936 108 ntBASIC2.06□□□□□ -2.08
O00370 HMGN2P3-201ENST00000433603 273 ntBASIC2.06□□□□□ -2.08
O00370 HMGN2P5-201ENST00000436882 273 ntBASIC2.06□□□□□ -2.08
O00370 AL137159.1-201ENST00000452808 512 ntBASIC2.06□□□□□ -2.08
O00370 RNA5SP233-201ENST00000459153 113 ntBASIC2.06□□□□□ -2.08
O00370 AC091951.2-201ENST00000500762 203 ntBASIC2.06□□□□□ -2.08
O00370 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.06□□□□□ -2.08
O00370 Y_RNA.702-201ENST00000516843 96 ntBASIC2.06□□□□□ -2.08
O00370 AC105029.1-201ENST00000520250 669 ntBASIC2.06□□□□□ -2.08
O00370 FGF7P1-201ENST00000582820 288 ntBASIC2.06□□□□□ -2.08
O00370 MIR4769-201ENST00000584126 77 ntBASIC2.06□□□□□ -2.08
O00370 AC018462.2-201ENST00000605375 395 ntBASIC2.06□□□□□ -2.08
O00370 AC009318.2-201ENST00000610917 651 ntBASIC2.06□□□□□ -2.08
O00370 AL627230.6-201ENST00000611129 280 ntBASIC2.06□□□□□ -2.08
O00370 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.06□□□□□ -2.08
O00370 AC099654.5-201ENST00000636479 350 ntBASIC2.06□□□□□ -2.08
O00370 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.06□□□□□ -2.08
O00370 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
O00370 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
O00370 RNU6-842P-201ENST00000384269 107 ntBASIC2.05□□□□□ -2.08
O00370 MIR518A2-201ENST00000384966 87 ntBASIC2.05□□□□□ -2.08
O00370 MIR764-201ENST00000390811 85 ntBASIC2.05□□□□□ -2.08
O00370 RNU6-1050P-201ENST00000410388 107 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms