Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.89□□□□□ -2.11
NPIPA3F8WFD2 AC079804.2-201ENST00000490376 200 ntBASIC1.89□□□□□ -2.11
NPIPA3F8WFD2 AC108210.2-201ENST00000503681 201 ntBASIC1.89□□□□□ -2.11
NPIPA3F8WFD2 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.89□□□□□ -2.11
NPIPA3F8WFD2 AC116337.1-201ENST00000509680 687 ntBASIC1.89□□□□□ -2.11
NPIPA3F8WFD2 RNU6-237P-201ENST00000515985 71 ntBASIC1.89□□□□□ -2.11
NPIPA3F8WFD2 AC015712.3-201ENST00000559380 164 ntBASIC1.89□□□□□ -2.11
NPIPA3F8WFD2 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.89□□□□□ -2.11
NPIPA3F8WFD2 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.89□□□□□ -2.11
NPIPA3F8WFD2 AC078899.2-201ENST00000595282 212 ntBASIC1.89□□□□□ -2.11
NPIPA3F8WFD2 AL022345.1-201ENST00000607292 135 ntBASIC1.89□□□□□ -2.11
NPIPA3F8WFD2 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.89□□□□□ -2.11
NPIPA3F8WFD2 AL162373.1-201ENST00000620433 407 ntBASIC1.89□□□□□ -2.11
NPIPA3F8WFD2 AC130454.1-201ENST00000622948 401 ntBASIC1.89□□□□□ -2.11
NPIPA3F8WFD2 MTND5P9-201ENST00000503854 1755 ntBASIC1.89□□□□□ -2.11
NPIPA3F8WFD2 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
NPIPA3F8WFD2 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.88□□□□□ -2.11
NPIPA3F8WFD2 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.88□□□□□ -2.11
NPIPA3F8WFD2 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
NPIPA3F8WFD2 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.88□□□□□ -2.11
NPIPA3F8WFD2 RNU1-58P-201ENST00000362413 163 ntBASIC1.88□□□□□ -2.11
NPIPA3F8WFD2 Y_RNA.332-201ENST00000365271 113 ntBASIC1.88□□□□□ -2.11
NPIPA3F8WFD2 MIR32-201ENST00000384965 70 ntBASIC1.88□□□□□ -2.11
NPIPA3F8WFD2 SNORA12.2-201ENST00000391040 156 ntBASIC1.88□□□□□ -2.11
NPIPA3F8WFD2 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
NPIPA3F8WFD2 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
NPIPA3F8WFD2 AL358453.1-201ENST00000422522 250 ntBASIC1.88□□□□□ -2.11
NPIPA3F8WFD2 EIF4EP2-201ENST00000422816 654 ntBASIC1.88□□□□□ -2.11
NPIPA3F8WFD2 MTCO3P46-201ENST00000425787 232 ntBASIC1.88□□□□□ -2.11
NPIPA3F8WFD2 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.88□□□□□ -2.11
NPIPA3F8WFD2 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.88□□□□□ -2.11
NPIPA3F8WFD2 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.88□□□□□ -2.11
NPIPA3F8WFD2 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.88□□□□□ -2.11
NPIPA3F8WFD2 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.88□□□□□ -2.11
NPIPA3F8WFD2 MTND5P5-201ENST00000503764 376 ntBASIC1.88□□□□□ -2.11
NPIPA3F8WFD2 DEFB131C-201ENST00000528817 165 ntBASIC1.88□□□□□ -2.11
NPIPA3F8WFD2 MIR5006-201ENST00000583027 110 ntBASIC1.88□□□□□ -2.11
NPIPA3F8WFD2 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.88□□□□□ -2.11
NPIPA3F8WFD2 AL109918.3-201ENST00000603072 338 ntBASIC1.88□□□□□ -2.11
NPIPA3F8WFD2 AC005562.2-201ENST00000618264 111 ntBASIC1.88□□□□□ -2.11
NPIPA3F8WFD2 ZNF720P1-201ENST00000562403 1939 ntBASIC1.87□□□□□ -2.11
NPIPA3F8WFD2 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
NPIPA3F8WFD2 AL356292.1-201ENST00000283110 373 ntBASIC1.87□□□□□ -2.11
NPIPA3F8WFD2 RNU1-76P-201ENST00000362903 159 ntBASIC1.87□□□□□ -2.11
NPIPA3F8WFD2 RNU6-23P-201ENST00000363283 107 ntBASIC1.87□□□□□ -2.11
NPIPA3F8WFD2 SNORD114-6-201ENST00000364393 72 ntBASIC1.87□□□□□ -2.11
NPIPA3F8WFD2 SNORD31B-201ENST00000364977 69 ntBASIC1.87□□□□□ -2.11
NPIPA3F8WFD2 RNU6-767P-201ENST00000384132 107 ntBASIC1.87□□□□□ -2.11
NPIPA3F8WFD2 RNU6-160P-201ENST00000384591 107 ntBASIC1.87□□□□□ -2.11
NPIPA3F8WFD2 MT-TL1-201ENST00000386347 75 ntBASIC1.87□□□□□ -2.11
NPIPA3F8WFD2 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.87□□□□□ -2.11
NPIPA3F8WFD2 MIR548F5-201ENST00000408421 86 ntBASIC1.87□□□□□ -2.11
NPIPA3F8WFD2 RPS26P42-201ENST00000413485 326 ntBASIC1.87□□□□□ -2.11
NPIPA3F8WFD2 AC123900.1-201ENST00000420390 96 ntBASIC1.87□□□□□ -2.11
NPIPA3F8WFD2 HMGN2P38-201ENST00000423806 265 ntBASIC1.87□□□□□ -2.11
NPIPA3F8WFD2 AL445646.1-201ENST00000431784 216 ntBASIC1.87□□□□□ -2.11
NPIPA3F8WFD2 AC004386.2-201ENST00000441858 148 ntBASIC1.87□□□□□ -2.11
NPIPA3F8WFD2 RPL23AP42-201ENST00000471152 471 ntBASIC1.87□□□□□ -2.11
NPIPA3F8WFD2 RNU7-30P-201ENST00000516835 62 ntBASIC1.87□□□□□ -2.11
NPIPA3F8WFD2 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC1.87□□□□□ -2.11
NPIPA3F8WFD2 MIR4287-201ENST00000579398 78 ntBASIC1.87□□□□□ -2.11
NPIPA3F8WFD2 AC010928.2-201ENST00000588017 287 ntBASIC1.87□□□□□ -2.11
NPIPA3F8WFD2 AC002984.1-201ENST00000591692 448 ntBASIC1.87□□□□□ -2.11
NPIPA3F8WFD2 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.87□□□□□ -2.11
NPIPA3F8WFD2 RPL17P51-201ENST00000605218 238 ntBASIC1.87□□□□□ -2.11
NPIPA3F8WFD2 Y_RNA.783-201ENST00000613546 102 ntBASIC1.87□□□□□ -2.11
NPIPA3F8WFD2 AL590240.4-201ENST00000616908 390 ntBASIC1.87□□□□□ -2.11
NPIPA3F8WFD2 AC137590.2-201ENST00000619709 240 ntBASIC1.87□□□□□ -2.11
NPIPA3F8WFD2 SCARNA4-201ENST00000629045 128 ntBASIC1.87□□□□□ -2.11
NPIPA3F8WFD2 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.87□□□□□ -2.11
NPIPA3F8WFD2 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
NPIPA3F8WFD2 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
NPIPA3F8WFD2 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.86□□□□□ -2.11
NPIPA3F8WFD2 CENPCP1-201ENST00000533085 2578 ntBASIC1.86□□□□□ -2.11
NPIPA3F8WFD2 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC1.86□□□□□ -2.11
NPIPA3F8WFD2 RNU6-545P-201ENST00000362681 104 ntBASIC1.86□□□□□ -2.11
NPIPA3F8WFD2 RNA5SP493-201ENST00000364115 91 ntBASIC1.86□□□□□ -2.11
NPIPA3F8WFD2 RNU4-9P-201ENST00000364951 139 ntBASIC1.86□□□□□ -2.11
NPIPA3F8WFD2 RNA5SP37-201ENST00000365420 130 ntBASIC1.86□□□□□ -2.11
NPIPA3F8WFD2 Y_RNA.473-201ENST00000384333 102 ntBASIC1.86□□□□□ -2.11
NPIPA3F8WFD2 SNORA51.11-201ENST00000384442 131 ntBASIC1.86□□□□□ -2.11
NPIPA3F8WFD2 Y_RNA.533-201ENST00000384596 114 ntBASIC1.86□□□□□ -2.11
NPIPA3F8WFD2 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.86□□□□□ -2.11
NPIPA3F8WFD2 AC139712.2-201ENST00000424302 339 ntBASIC1.86□□□□□ -2.11
NPIPA3F8WFD2 RPS3AP52-201ENST00000435639 297 ntBASIC1.86□□□□□ -2.11
NPIPA3F8WFD2 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.86□□□□□ -2.11
NPIPA3F8WFD2 MTCO3P8-201ENST00000453691 755 ntBASIC1.86□□□□□ -2.11
NPIPA3F8WFD2 RNA5SP233-201ENST00000459153 113 ntBASIC1.86□□□□□ -2.11
NPIPA3F8WFD2 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.86□□□□□ -2.11
NPIPA3F8WFD2 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.86□□□□□ -2.11
NPIPA3F8WFD2 AC005668.1-201ENST00000571142 476 ntBASIC1.86□□□□□ -2.11
NPIPA3F8WFD2 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.86□□□□□ -2.11
NPIPA3F8WFD2 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.86□□□□□ -2.11
NPIPA3F8WFD2 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.86□□□□□ -2.11
NPIPA3F8WFD2 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.86□□□□□ -2.11
NPIPA3F8WFD2 LINC02555-201ENST00000563933 1951 ntBASIC1.86□□□□□ -2.11
NPIPA3F8WFD2 MTND4P1-201ENST00000457501 1466 ntBASIC1.86□□□□□ -2.11
NPIPA3F8WFD2 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
NPIPA3F8WFD2 ZNF204P-201ENST00000416749 2397 ntBASIC1.85□□□□□ -2.11
NPIPA3F8WFD2 Y_RNA.48-201ENST00000362710 103 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 157.6 ms