Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 RNU6-652P-201ENST00000365488 107 ntBASIC-1.29□□□□□ -2.62
LINC01549A6NIU2 TRIM60P5Y-201ENST00000413946 574 ntBASIC-1.29□□□□□ -2.62
LINC01549A6NIU2 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC-1.29□□□□□ -2.62
LINC01549A6NIU2 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC-1.29□□□□□ -2.62
LINC01549A6NIU2 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC-1.29□□□□□ -2.62
LINC01549A6NIU2 SNORA31.19-201ENST00000517079 126 ntBASIC-1.29□□□□□ -2.62
LINC01549A6NIU2 RNU2-12P-201ENST00000517216 168 ntBASIC-1.29□□□□□ -2.62
LINC01549A6NIU2 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC-1.29□□□□□ -2.62
LINC01549A6NIU2 AC090615.1-201ENST00000577519 154 ntBASIC-1.29□□□□□ -2.62
LINC01549A6NIU2 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-1.29□□□□□ -2.62
LINC01549A6NIU2 MIR5589-201ENST00000579442 60 ntBASIC-1.29□□□□□ -2.62
LINC01549A6NIU2 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC-1.29□□□□□ -2.62
LINC01549A6NIU2 MIR8054-201ENST00000620877 86 ntBASIC-1.29□□□□□ -2.62
LINC01549A6NIU2 AC009268.2-201ENST00000621925 457 ntBASIC-1.29□□□□□ -2.62
LINC01549A6NIU2 U6.101-201ENST00000637707 76 ntBASIC-1.29□□□□□ -2.62
LINC01549A6NIU2 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC-1.29□□□□□ -2.62
LINC01549A6NIU2 SNORD114-14-201ENST00000362723 75 ntBASIC-1.3□□□□□ -2.62
LINC01549A6NIU2 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC-1.3□□□□□ -2.62
LINC01549A6NIU2 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-1.3□□□□□ -2.62
LINC01549A6NIU2 AC079354.2-201ENST00000453523 154 ntBASIC-1.3□□□□□ -2.62
LINC01549A6NIU2 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC-1.3□□□□□ -2.62
LINC01549A6NIU2 RNU6-416P-201ENST00000516265 103 ntBASIC-1.3□□□□□ -2.62
LINC01549A6NIU2 AC023050.3-201ENST00000541142 333 ntBASIC-1.3□□□□□ -2.62
LINC01549A6NIU2 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC-1.3□□□□□ -2.62
LINC01549A6NIU2 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC-1.3□□□□□ -2.62
LINC01549A6NIU2 AP000484.1-201ENST00000620067 1252 ntBASIC-1.3□□□□□ -2.62
LINC01549A6NIU2 NEAT1_2.1-201ENST00000620525 105 ntBASIC-1.3□□□□□ -2.62
LINC01549A6NIU2 uc_338.22-201ENST00000622722 187 ntBASIC-1.3□□□□□ -2.62
LINC01549A6NIU2 RNU6-223P-201ENST00000362830 107 ntBASIC-1.31□□□□□ -2.62
LINC01549A6NIU2 SNORD114-11-201ENST00000363738 75 ntBASIC-1.31□□□□□ -2.62
LINC01549A6NIU2 SNORA40C-201ENST00000391285 128 ntBASIC-1.31□□□□□ -2.62
LINC01549A6NIU2 MTND4P15-201ENST00000437913 1033 ntBASIC-1.31□□□□□ -2.62
LINC01549A6NIU2 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC-1.31□□□□□ -2.62
LINC01549A6NIU2 RNU6-897P-201ENST00000517135 105 ntBASIC-1.31□□□□□ -2.62
LINC01549A6NIU2 DEFB131D-201ENST00000526803 184 ntBASIC-1.31□□□□□ -2.62
LINC01549A6NIU2 DEFB131C-201ENST00000528817 165 ntBASIC-1.31□□□□□ -2.62
LINC01549A6NIU2 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC-1.31□□□□□ -2.62
LINC01549A6NIU2 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC-1.31□□□□□ -2.62
LINC01549A6NIU2 AC018889.1-201ENST00000605372 397 ntBASIC-1.31□□□□□ -2.62
LINC01549A6NIU2 AC008759.3-201ENST00000613300 508 ntBASIC-1.31□□□□□ -2.62
LINC01549A6NIU2 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC-1.31□□□□□ -2.62
LINC01549A6NIU2 AL450472.1-202ENST00000637286 180 ntBASIC-1.31□□□□□ -2.62
LINC01549A6NIU2 SNORA36.1-201ENST00000363424 132 ntBASIC-1.32□□□□□ -2.62
LINC01549A6NIU2 RNU6-619P-201ENST00000365146 108 ntBASIC-1.32□□□□□ -2.62
LINC01549A6NIU2 RPS20P2-201ENST00000402520 389 ntBASIC-1.32□□□□□ -2.62
LINC01549A6NIU2 SNORD100-201ENST00000408573 76 ntBASIC-1.32□□□□□ -2.62
LINC01549A6NIU2 AC016831.2-201ENST00000417179 352 ntBASIC-1.32□□□□□ -2.62
LINC01549A6NIU2 ZNF885P-201ENST00000420174 1098 ntBASIC-1.32□□□□□ -2.62
LINC01549A6NIU2 MTCYBP5-201ENST00000423752 1135 ntBASIC-1.32□□□□□ -2.62
LINC01549A6NIU2 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC-1.32□□□□□ -2.62
LINC01549A6NIU2 DPPA3P3-201ENST00000603842 430 ntBASIC-1.32□□□□□ -2.62
LINC01549A6NIU2 uc_338.28-201ENST00000612082 187 ntBASIC-1.32□□□□□ -2.62
LINC01549A6NIU2 RNU6-657P-201ENST00000383904 107 ntBASIC-1.33□□□□□ -2.62
LINC01549A6NIU2 RNU6-166P-201ENST00000384371 107 ntBASIC-1.33□□□□□ -2.62
LINC01549A6NIU2 RNU6-1297P-201ENST00000384415 104 ntBASIC-1.33□□□□□ -2.62
LINC01549A6NIU2 RN7SKP142-201ENST00000411236 328 ntBASIC-1.33□□□□□ -2.62
LINC01549A6NIU2 AL663109.1-201ENST00000411498 844 ntBASIC-1.33□□□□□ -2.62
LINC01549A6NIU2 TIMM9P3-201ENST00000428659 274 ntBASIC-1.33□□□□□ -2.62
LINC01549A6NIU2 ART2BP-201ENST00000453501 499 ntBASIC-1.33□□□□□ -2.62
LINC01549A6NIU2 AC093809.1-201ENST00000509155 340 ntBASIC-1.33□□□□□ -2.62
LINC01549A6NIU2 AC025465.4-201ENST00000513422 638 ntBASIC-1.33□□□□□ -2.62
LINC01549A6NIU2 RN7SKP164-201ENST00000516138 266 ntBASIC-1.33□□□□□ -2.62
LINC01549A6NIU2 AC090502.2-201ENST00000549267 280 ntBASIC-1.33□□□□□ -2.62
LINC01549A6NIU2 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC-1.33□□□□□ -2.62
LINC01549A6NIU2 AC091135.1-201ENST00000585943 307 ntBASIC-1.33□□□□□ -2.62
LINC01549A6NIU2 AL162424.1-201ENST00000602325 221 ntBASIC-1.33□□□□□ -2.62
LINC01549A6NIU2 AC007684.1-201ENST00000609671 477 ntBASIC-1.33□□□□□ -2.62
LINC01549A6NIU2 AC122133.1-201ENST00000613964 233 ntBASIC-1.33□□□□□ -2.62
LINC01549A6NIU2 FAM157A-202ENST00000615155 405 ntBASIC-1.33□□□□□ -2.62
LINC01549A6NIU2 AC068792.1-201ENST00000621354 417 ntBASIC-1.33□□□□□ -2.62
LINC01549A6NIU2 snoU2-30.2-201ENST00000362805 70 ntBASIC-1.34□□□□□ -2.62
LINC01549A6NIU2 SNORD116-23-201ENST00000384645 92 ntBASIC-1.34□□□□□ -2.62
LINC01549A6NIU2 MIR525-201ENST00000384978 85 ntBASIC-1.34□□□□□ -2.62
LINC01549A6NIU2 AC133104.1-201ENST00000429100 218 ntBASIC-1.34□□□□□ -2.62
LINC01549A6NIU2 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC-1.34□□□□□ -2.62
LINC01549A6NIU2 RNU2-60P-201ENST00000517290 128 ntBASIC-1.34□□□□□ -2.62
LINC01549A6NIU2 MIR4802-201ENST00000581881 80 ntBASIC-1.34□□□□□ -2.62
LINC01549A6NIU2 AL606834.3-201ENST00000602615 496 ntBASIC-1.34□□□□□ -2.62
LINC01549A6NIU2 RNU6-440P-201ENST00000390882 105 ntBASIC-1.35□□□□□ -2.63
LINC01549A6NIU2 AL022718.1-201ENST00000412004 84 ntBASIC-1.35□□□□□ -2.63
LINC01549A6NIU2 AC006366.1-201ENST00000422002 759 ntBASIC-1.35□□□□□ -2.63
LINC01549A6NIU2 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC-1.35□□□□□ -2.63
LINC01549A6NIU2 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC-1.35□□□□□ -2.63
LINC01549A6NIU2 RNU6-977P-201ENST00000516411 103 ntBASIC-1.35□□□□□ -2.63
LINC01549A6NIU2 RNA5SP480-201ENST00000516840 109 ntBASIC-1.35□□□□□ -2.63
LINC01549A6NIU2 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC-1.35□□□□□ -2.63
LINC01549A6NIU2 AC138869.1-201ENST00000568623 124 ntBASIC-1.35□□□□□ -2.63
LINC01549A6NIU2 AL136363.2-201ENST00000604173 851 ntBASIC-1.35□□□□□ -2.63
LINC01549A6NIU2 AC022217.4-201ENST00000604389 163 ntBASIC-1.35□□□□□ -2.63
LINC01549A6NIU2 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC-1.35□□□□□ -2.63
LINC01549A6NIU2 RNU4-15P-201ENST00000362613 141 ntBASIC-1.36□□□□□ -2.63
LINC01549A6NIU2 RNU4-73P-201ENST00000363164 141 ntBASIC-1.36□□□□□ -2.63
LINC01549A6NIU2 RNY1P7-201ENST00000384743 110 ntBASIC-1.36□□□□□ -2.63
LINC01549A6NIU2 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC-1.36□□□□□ -2.63
LINC01549A6NIU2 AL590135.1-201ENST00000422215 156 ntBASIC-1.36□□□□□ -2.63
LINC01549A6NIU2 AC019205.3-201ENST00000424573 156 ntBASIC-1.36□□□□□ -2.63
LINC01549A6NIU2 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC-1.36□□□□□ -2.63
LINC01549A6NIU2 USP9YP29-201ENST00000445112 563 ntBASIC-1.36□□□□□ -2.63
LINC01549A6NIU2 AC016700.2-201ENST00000446011 156 ntBASIC-1.36□□□□□ -2.63
LINC01549A6NIU2 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC-1.36□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 169.5 ms