Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC0.65□□□□□ -2.31
TRAV41A0A0B4J266 AC245884.10-201ENST00000597355 337 ntBASIC0.65□□□□□ -2.31
TRAV41A0A0B4J266 AC013244.2-201ENST00000603396 103 ntBASIC0.65□□□□□ -2.31
TRAV41A0A0B4J266 AC092354.1-201ENST00000606057 376 ntBASIC0.65□□□□□ -2.31
TRAV41A0A0B4J266 AC064807.4-201ENST00000607201 407 ntBASIC0.65□□□□□ -2.31
TRAV41A0A0B4J266 AL021879.1-201ENST00000611756 288 ntBASIC0.65□□□□□ -2.31
TRAV41A0A0B4J266 RNU6-562P-201ENST00000362731 107 ntBASIC0.64□□□□□ -2.31
TRAV41A0A0B4J266 RNU6-282P-201ENST00000365357 103 ntBASIC0.64□□□□□ -2.31
TRAV41A0A0B4J266 SNORD114-22-201ENST00000365423 72 ntBASIC0.64□□□□□ -2.31
TRAV41A0A0B4J266 RNA5SP259-201ENST00000365541 109 ntBASIC0.64□□□□□ -2.31
TRAV41A0A0B4J266 MIR499A-201ENST00000384903 122 ntBASIC0.64□□□□□ -2.31
TRAV41A0A0B4J266 MIR146A-201ENST00000385201 99 ntBASIC0.64□□□□□ -2.31
TRAV41A0A0B4J266 RNU6-1093P-201ENST00000391194 107 ntBASIC0.64□□□□□ -2.31
TRAV41A0A0B4J266 AC004866.1-201ENST00000411748 78 ntBASIC0.64□□□□□ -2.31
TRAV41A0A0B4J266 HMGN2P34-201ENST00000437647 269 ntBASIC0.64□□□□□ -2.31
TRAV41A0A0B4J266 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.64□□□□□ -2.31
TRAV41A0A0B4J266 AL606517.2-201ENST00000442855 241 ntBASIC0.64□□□□□ -2.31
TRAV41A0A0B4J266 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.64□□□□□ -2.31
TRAV41A0A0B4J266 SCARNA18-201ENST00000459004 134 ntBASIC0.64□□□□□ -2.31
TRAV41A0A0B4J266 RNU7-34P-201ENST00000459394 64 ntBASIC0.64□□□□□ -2.31
TRAV41A0A0B4J266 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.64□□□□□ -2.31
TRAV41A0A0B4J266 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.64□□□□□ -2.31
TRAV41A0A0B4J266 MIR5583-1-201ENST00000580941 59 ntBASIC0.64□□□□□ -2.31
TRAV41A0A0B4J266 MIR4653-201ENST00000585107 83 ntBASIC0.64□□□□□ -2.31
TRAV41A0A0B4J266 FAM106DP-201ENST00000586416 501 ntBASIC0.64□□□□□ -2.31
TRAV41A0A0B4J266 RSL24D1P11-201ENST00000591045 491 ntBASIC0.64□□□□□ -2.31
TRAV41A0A0B4J266 Z84480.1-201ENST00000605131 311 ntBASIC0.64□□□□□ -2.31
TRAV41A0A0B4J266 RPL17P51-201ENST00000605218 238 ntBASIC0.64□□□□□ -2.31
TRAV41A0A0B4J266 MIR98-201ENST00000606724 119 ntBASIC0.64□□□□□ -2.31
TRAV41A0A0B4J266 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.64□□□□□ -2.31
TRAV41A0A0B4J266 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.64□□□□□ -2.31
TRAV41A0A0B4J266 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.64□□□□□ -2.31
TRAV41A0A0B4J266 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.64□□□□□ -2.31
TRAV41A0A0B4J266 snoU2-30.2-201ENST00000362805 70 ntBASIC0.63□□□□□ -2.31
TRAV41A0A0B4J266 RNU6-1097P-201ENST00000363586 107 ntBASIC0.63□□□□□ -2.31
TRAV41A0A0B4J266 RNU4-48P-201ENST00000365559 182 ntBASIC0.63□□□□□ -2.31
TRAV41A0A0B4J266 RNU6-297P-201ENST00000384636 107 ntBASIC0.63□□□□□ -2.31
TRAV41A0A0B4J266 MIR549A-201ENST00000385268 96 ntBASIC0.63□□□□□ -2.31
TRAV41A0A0B4J266 RNA5SP109-201ENST00000391010 116 ntBASIC0.63□□□□□ -2.31
TRAV41A0A0B4J266 Z99497.1-201ENST00000421282 135 ntBASIC0.63□□□□□ -2.31
TRAV41A0A0B4J266 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.63□□□□□ -2.31
TRAV41A0A0B4J266 RPS4XP11-201ENST00000446897 772 ntBASIC0.63□□□□□ -2.31
TRAV41A0A0B4J266 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.63□□□□□ -2.31
TRAV41A0A0B4J266 RPS26P45-201ENST00000471748 340 ntBASIC0.63□□□□□ -2.31
TRAV41A0A0B4J266 RNU6-1129P-201ENST00000515964 104 ntBASIC0.63□□□□□ -2.31
TRAV41A0A0B4J266 RNU6-351P-201ENST00000516097 100 ntBASIC0.63□□□□□ -2.31
TRAV41A0A0B4J266 SCARNA16.2-201ENST00000516520 172 ntBASIC0.63□□□□□ -2.31
TRAV41A0A0B4J266 SCARNA1-201ENST00000517138 166 ntBASIC0.63□□□□□ -2.31
TRAV41A0A0B4J266 AC008088.1-201ENST00000580993 280 ntBASIC0.63□□□□□ -2.31
TRAV41A0A0B4J266 MIR4452-201ENST00000583004 71 ntBASIC0.63□□□□□ -2.31
TRAV41A0A0B4J266 AC016727.2-201ENST00000603988 621 ntBASIC0.63□□□□□ -2.31
TRAV41A0A0B4J266 AC104458.1-201ENST00000608243 463 ntBASIC0.63□□□□□ -2.31
TRAV41A0A0B4J266 AC006566.1-201ENST00000608943 513 ntBASIC0.63□□□□□ -2.31
TRAV41A0A0B4J266 AC108706.1-201ENST00000611053 297 ntBASIC0.63□□□□□ -2.31
TRAV41A0A0B4J266 AC021506.2-201ENST00000612354 169 ntBASIC0.63□□□□□ -2.31
TRAV41A0A0B4J266 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC0.63□□□□□ -2.31
TRAV41A0A0B4J266 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.63□□□□□ -2.31
TRAV41A0A0B4J266 MIR6866-201ENST00000638146 69 ntBASIC0.63□□□□□ -2.31
TRAV41A0A0B4J266 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
TRAV41A0A0B4J266 MIR373-201ENST00000362273 69 ntBASIC0.62□□□□□ -2.31
TRAV41A0A0B4J266 Y_RNA.287-201ENST00000364853 94 ntBASIC0.62□□□□□ -2.31
TRAV41A0A0B4J266 Y_RNA.560-201ENST00000384689 102 ntBASIC0.62□□□□□ -2.31
TRAV41A0A0B4J266 MIR19B1-201ENST00000384829 87 ntBASIC0.62□□□□□ -2.31
TRAV41A0A0B4J266 MIR520E-201ENST00000384867 87 ntBASIC0.62□□□□□ -2.31
TRAV41A0A0B4J266 SNORD73A-201ENST00000386062 65 ntBASIC0.62□□□□□ -2.31
TRAV41A0A0B4J266 RPL21P1-201ENST00000399532 476 ntBASIC0.62□□□□□ -2.31
TRAV41A0A0B4J266 AC090960.1-201ENST00000421072 306 ntBASIC0.62□□□□□ -2.31
TRAV41A0A0B4J266 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.62□□□□□ -2.31
TRAV41A0A0B4J266 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC0.62□□□□□ -2.31
TRAV41A0A0B4J266 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
TRAV41A0A0B4J266 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.62□□□□□ -2.31
TRAV41A0A0B4J266 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.62□□□□□ -2.31
TRAV41A0A0B4J266 HMGN1P12-201ENST00000499125 195 ntBASIC0.62□□□□□ -2.31
TRAV41A0A0B4J266 SUMO2P16-201ENST00000519475 264 ntBASIC0.62□□□□□ -2.31
TRAV41A0A0B4J266 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC0.62□□□□□ -2.31
TRAV41A0A0B4J266 RNU6-323P-201ENST00000521915 107 ntBASIC0.62□□□□□ -2.31
TRAV41A0A0B4J266 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.62□□□□□ -2.31
TRAV41A0A0B4J266 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.62□□□□□ -2.31
TRAV41A0A0B4J266 AL929325.1-201ENST00000603096 117 ntBASIC0.62□□□□□ -2.31
TRAV41A0A0B4J266 RNU6-85P-201ENST00000605989 107 ntBASIC0.62□□□□□ -2.31
TRAV41A0A0B4J266 AL136370.1-201ENST00000608166 691 ntBASIC0.62□□□□□ -2.31
TRAV41A0A0B4J266 AL136221.1-201ENST00000621449 509 ntBASIC0.62□□□□□ -2.31
TRAV41A0A0B4J266 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.62□□□□□ -2.31
TRAV41A0A0B4J266 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
TRAV41A0A0B4J266 RNU6-1123P-201ENST00000362347 106 ntBASIC0.61□□□□□ -2.31
TRAV41A0A0B4J266 Y_RNA.399-201ENST00000383955 105 ntBASIC0.61□□□□□ -2.31
TRAV41A0A0B4J266 RNU6-1235P-201ENST00000384559 107 ntBASIC0.61□□□□□ -2.31
TRAV41A0A0B4J266 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
TRAV41A0A0B4J266 SNORA12.1-201ENST00000390873 148 ntBASIC0.61□□□□□ -2.31
TRAV41A0A0B4J266 SNORA40.3-201ENST00000390964 122 ntBASIC0.61□□□□□ -2.31
TRAV41A0A0B4J266 MIR300-201ENST00000401138 83 ntBASIC0.61□□□□□ -2.31
TRAV41A0A0B4J266 RNU2-64P-201ENST00000411315 191 ntBASIC0.61□□□□□ -2.31
TRAV41A0A0B4J266 AC016909.1-201ENST00000415916 166 ntBASIC0.61□□□□□ -2.31
TRAV41A0A0B4J266 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.61□□□□□ -2.31
TRAV41A0A0B4J266 PIGFP2-201ENST00000421400 651 ntBASIC0.61□□□□□ -2.31
TRAV41A0A0B4J266 AC010154.1-201ENST00000425857 269 ntBASIC0.61□□□□□ -2.31
TRAV41A0A0B4J266 AC004941.2-201ENST00000427009 228 ntBASIC0.61□□□□□ -2.31
TRAV41A0A0B4J266 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.61□□□□□ -2.31
TRAV41A0A0B4J266 TIMM9P3-201ENST00000428659 274 ntBASIC0.61□□□□□ -2.31
TRAV41A0A0B4J266 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms