Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 AP000275.1-201ENST00000411943 390 ntBASIC0.29□□□□□ -2.36
TRAV12-1A0A0B4J245 AC016909.1-201ENST00000415916 166 ntBASIC0.29□□□□□ -2.36
TRAV12-1A0A0B4J245 AC245047.3-201ENST00000429428 127 ntBASIC0.29□□□□□ -2.36
TRAV12-1A0A0B4J245 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.29□□□□□ -2.36
TRAV12-1A0A0B4J245 RNU7-90P-201ENST00000459216 62 ntBASIC0.29□□□□□ -2.36
TRAV12-1A0A0B4J245 snoU109.3-201ENST00000459477 145 ntBASIC0.29□□□□□ -2.36
TRAV12-1A0A0B4J245 AC098869.1-201ENST00000481627 292 ntBASIC0.29□□□□□ -2.36
TRAV12-1A0A0B4J245 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC0.29□□□□□ -2.36
TRAV12-1A0A0B4J245 AC025465.4-201ENST00000513422 638 ntBASIC0.29□□□□□ -2.36
TRAV12-1A0A0B4J245 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.29□□□□□ -2.36
TRAV12-1A0A0B4J245 SNORA25.17-201ENST00000517184 124 ntBASIC0.29□□□□□ -2.36
TRAV12-1A0A0B4J245 DEFB108E-201ENST00000524692 240 ntBASIC0.29□□□□□ -2.36
TRAV12-1A0A0B4J245 PCMTD1P2-201ENST00000565017 355 ntBASIC0.29□□□□□ -2.36
TRAV12-1A0A0B4J245 AC133485.1-201ENST00000567176 124 ntBASIC0.29□□□□□ -2.36
TRAV12-1A0A0B4J245 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC0.29□□□□□ -2.36
TRAV12-1A0A0B4J245 AC138907.6-201ENST00000568401 126 ntBASIC0.29□□□□□ -2.36
TRAV12-1A0A0B4J245 MIR4999-201ENST00000585029 91 ntBASIC0.29□□□□□ -2.36
TRAV12-1A0A0B4J245 MIR4781-201ENST00000585250 76 ntBASIC0.29□□□□□ -2.36
TRAV12-1A0A0B4J245 AC098848.2-201ENST00000588023 330 ntBASIC0.29□□□□□ -2.36
TRAV12-1A0A0B4J245 AF131215.7-201ENST00000602443 707 ntBASIC0.29□□□□□ -2.36
TRAV12-1A0A0B4J245 AL359075.3-201ENST00000613288 217 ntBASIC0.29□□□□□ -2.36
TRAV12-1A0A0B4J245 TCL6_2.1-201ENST00000615162 119 ntBASIC0.29□□□□□ -2.36
TRAV12-1A0A0B4J245 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.29□□□□□ -2.36
TRAV12-1A0A0B4J245 AL049777.1-201ENST00000622740 518 ntBASIC0.29□□□□□ -2.36
TRAV12-1A0A0B4J245 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.29□□□□□ -2.36
TRAV12-1A0A0B4J245 AC099654.13-201ENST00000639774 207 ntBASIC0.29□□□□□ -2.36
TRAV12-1A0A0B4J245 RNU6-199P-201ENST00000362954 107 ntBASIC0.28□□□□□ -2.36
TRAV12-1A0A0B4J245 Y_RNA.367-201ENST00000365544 101 ntBASIC0.28□□□□□ -2.36
TRAV12-1A0A0B4J245 RNU6-945P-201ENST00000383947 107 ntBASIC0.28□□□□□ -2.36
TRAV12-1A0A0B4J245 Y_RNA.480-201ENST00000384364 102 ntBASIC0.28□□□□□ -2.36
TRAV12-1A0A0B4J245 MRPL42P3-201ENST00000401492 326 ntBASIC0.28□□□□□ -2.36
TRAV12-1A0A0B4J245 SNORA11-201ENST00000408789 128 ntBASIC0.28□□□□□ -2.36
TRAV12-1A0A0B4J245 HMGN1P14-201ENST00000412459 517 ntBASIC0.28□□□□□ -2.36
TRAV12-1A0A0B4J245 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.28□□□□□ -2.36
TRAV12-1A0A0B4J245 AL356583.2-201ENST00000426536 280 ntBASIC0.28□□□□□ -2.36
TRAV12-1A0A0B4J245 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.28□□□□□ -2.36
TRAV12-1A0A0B4J245 FABP5P4-201ENST00000437203 171 ntBASIC0.28□□□□□ -2.36
TRAV12-1A0A0B4J245 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.28□□□□□ -2.36
TRAV12-1A0A0B4J245 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.28□□□□□ -2.36
TRAV12-1A0A0B4J245 AC113410.1-201ENST00000505029 247 ntBASIC0.28□□□□□ -2.36
TRAV12-1A0A0B4J245 AC007834.2-201ENST00000536310 343 ntBASIC0.28□□□□□ -2.36
TRAV12-1A0A0B4J245 AC090049.2-201ENST00000550377 109 ntBASIC0.28□□□□□ -2.36
TRAV12-1A0A0B4J245 AC026470.2-201ENST00000561492 181 ntBASIC0.28□□□□□ -2.36
TRAV12-1A0A0B4J245 AC012557.2-201ENST00000605919 418 ntBASIC0.28□□□□□ -2.36
TRAV12-1A0A0B4J245 AC002044.1-201ENST00000606707 158 ntBASIC0.28□□□□□ -2.36
TRAV12-1A0A0B4J245 AC027807.2-201ENST00000616099 408 ntBASIC0.28□□□□□ -2.36
TRAV12-1A0A0B4J245 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.28□□□□□ -2.36
TRAV12-1A0A0B4J245 CASC19-280ENST00000642102 1351 ntBASIC0.28□□□□□ -2.36
TRAV12-1A0A0B4J245 ELL2P3-201ENST00000457883 1602 ntBASIC0.27□□□□□ -2.37
TRAV12-1A0A0B4J245 RNU6-1305P-201ENST00000364353 104 ntBASIC0.27□□□□□ -2.37
TRAV12-1A0A0B4J245 RNU4-48P-201ENST00000365559 182 ntBASIC0.27□□□□□ -2.37
TRAV12-1A0A0B4J245 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.27□□□□□ -2.37
TRAV12-1A0A0B4J245 SNORD116-13-201ENST00000384408 92 ntBASIC0.27□□□□□ -2.37
TRAV12-1A0A0B4J245 RNU6-393P-201ENST00000384475 107 ntBASIC0.27□□□□□ -2.37
TRAV12-1A0A0B4J245 RNU6-906P-201ENST00000384700 70 ntBASIC0.27□□□□□ -2.37
TRAV12-1A0A0B4J245 AL451046.2-201ENST00000403074 277 ntBASIC0.27□□□□□ -2.37
TRAV12-1A0A0B4J245 AC004866.1-201ENST00000411748 78 ntBASIC0.27□□□□□ -2.37
TRAV12-1A0A0B4J245 AC114737.2-201ENST00000421583 173 ntBASIC0.27□□□□□ -2.37
TRAV12-1A0A0B4J245 AC244023.1-201ENST00000426884 112 ntBASIC0.27□□□□□ -2.37
TRAV12-1A0A0B4J245 AC108667.1-201ENST00000428618 249 ntBASIC0.27□□□□□ -2.37
TRAV12-1A0A0B4J245 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.27□□□□□ -2.37
TRAV12-1A0A0B4J245 AC104850.1-201ENST00000435940 476 ntBASIC0.27□□□□□ -2.37
TRAV12-1A0A0B4J245 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.27□□□□□ -2.37
TRAV12-1A0A0B4J245 AC074290.1-201ENST00000448883 135 ntBASIC0.27□□□□□ -2.37
TRAV12-1A0A0B4J245 RPL39P39-201ENST00000455840 151 ntBASIC0.27□□□□□ -2.37
TRAV12-1A0A0B4J245 RNU7-57P-201ENST00000459540 60 ntBASIC0.27□□□□□ -2.37
TRAV12-1A0A0B4J245 AL049830.1-201ENST00000468034 425 ntBASIC0.27□□□□□ -2.37
TRAV12-1A0A0B4J245 AC119751.5-201ENST00000514077 770 ntBASIC0.27□□□□□ -2.37
TRAV12-1A0A0B4J245 RNU6-917P-201ENST00000516294 104 ntBASIC0.27□□□□□ -2.37
TRAV12-1A0A0B4J245 AC090572.1-201ENST00000519251 160 ntBASIC0.27□□□□□ -2.37
TRAV12-1A0A0B4J245 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.27□□□□□ -2.37
TRAV12-1A0A0B4J245 AC018659.1-201ENST00000551083 169 ntBASIC0.27□□□□□ -2.37
TRAV12-1A0A0B4J245 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.27□□□□□ -2.37
TRAV12-1A0A0B4J245 AC242498.1-201ENST00000604134 111 ntBASIC0.27□□□□□ -2.37
TRAV12-1A0A0B4J245 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC0.27□□□□□ -2.37
TRAV12-1A0A0B4J245 AC243994.1-201ENST00000618627 109 ntBASIC0.27□□□□□ -2.37
TRAV12-1A0A0B4J245 U3.8-201ENST00000363675 217 ntBASIC0.26□□□□□ -2.37
TRAV12-1A0A0B4J245 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
TRAV12-1A0A0B4J245 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.26□□□□□ -2.37
TRAV12-1A0A0B4J245 CDK8P2-201ENST00000415020 547 ntBASIC0.26□□□□□ -2.37
TRAV12-1A0A0B4J245 MTND3P17-201ENST00000416968 344 ntBASIC0.26□□□□□ -2.37
TRAV12-1A0A0B4J245 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.26□□□□□ -2.37
TRAV12-1A0A0B4J245 AC009237.7-201ENST00000447357 229 ntBASIC0.26□□□□□ -2.37
TRAV12-1A0A0B4J245 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.26□□□□□ -2.37
TRAV12-1A0A0B4J245 AL163540.1-201ENST00000485382 386 ntBASIC0.26□□□□□ -2.37
TRAV12-1A0A0B4J245 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.26□□□□□ -2.37
TRAV12-1A0A0B4J245 RNU2-69P-201ENST00000516061 100 ntBASIC0.26□□□□□ -2.37
TRAV12-1A0A0B4J245 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC0.26□□□□□ -2.37
TRAV12-1A0A0B4J245 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.26□□□□□ -2.37
TRAV12-1A0A0B4J245 MIR4509-3-201ENST00000578671 94 ntBASIC0.26□□□□□ -2.37
TRAV12-1A0A0B4J245 MIR4775-201ENST00000581168 75 ntBASIC0.26□□□□□ -2.37
TRAV12-1A0A0B4J245 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC0.26□□□□□ -2.37
TRAV12-1A0A0B4J245 MIR4509-2-201ENST00000583920 94 ntBASIC0.26□□□□□ -2.37
TRAV12-1A0A0B4J245 AL357312.1-201ENST00000603879 298 ntBASIC0.26□□□□□ -2.37
TRAV12-1A0A0B4J245 AC112191.3-201ENST00000604371 277 ntBASIC0.26□□□□□ -2.37
TRAV12-1A0A0B4J245 PRELID3BP2-201ENST00000605362 201 ntBASIC0.26□□□□□ -2.37
TRAV12-1A0A0B4J245 AC018645.2-201ENST00000609151 472 ntBASIC0.26□□□□□ -2.37
TRAV12-1A0A0B4J245 AC091304.9-201ENST00000612091 226 ntBASIC0.26□□□□□ -2.37
TRAV12-1A0A0B4J245 AL133173.2-201ENST00000614270 90 ntBASIC0.26□□□□□ -2.37
TRAV12-1A0A0B4J245 MIR4509-1-201ENST00000618224 94 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 146.8 ms