Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 HSPE1P23-201ENST00000509838 286 ntBASIC0.41□□□□□ -2.34
TMEM56-RWDD3S4R434 AC091874.1-201ENST00000511402 339 ntBASIC0.41□□□□□ -2.34
TMEM56-RWDD3S4R434 AC104136.1-201ENST00000512969 394 ntBASIC0.41□□□□□ -2.34
TMEM56-RWDD3S4R434 RNU6-1146P-201ENST00000516282 102 ntBASIC0.41□□□□□ -2.34
TMEM56-RWDD3S4R434 RNU6-948P-201ENST00000516374 107 ntBASIC0.41□□□□□ -2.34
TMEM56-RWDD3S4R434 AC024995.1-201ENST00000523014 93 ntBASIC0.41□□□□□ -2.34
TMEM56-RWDD3S4R434 AC011604.1-201ENST00000545978 196 ntBASIC0.41□□□□□ -2.34
TMEM56-RWDD3S4R434 FAM106DP-201ENST00000586416 501 ntBASIC0.41□□□□□ -2.34
TMEM56-RWDD3S4R434 AL353765.1-201ENST00000605514 183 ntBASIC0.41□□□□□ -2.34
TMEM56-RWDD3S4R434 AC064807.4-201ENST00000607201 407 ntBASIC0.41□□□□□ -2.34
TMEM56-RWDD3S4R434 AC008250.2-201ENST00000615261 205 ntBASIC0.41□□□□□ -2.34
TMEM56-RWDD3S4R434 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.41□□□□□ -2.34
TMEM56-RWDD3S4R434 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.41□□□□□ -2.34
TMEM56-RWDD3S4R434 OR4G1P-203ENST00000641984 1631 ntBASIC0.41□□□□□ -2.34
TMEM56-RWDD3S4R434 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.4□□□□□ -2.35
TMEM56-RWDD3S4R434 RNU6-533P-201ENST00000384144 107 ntBASIC0.4□□□□□ -2.35
TMEM56-RWDD3S4R434 RNU6-1235P-201ENST00000384559 107 ntBASIC0.4□□□□□ -2.35
TMEM56-RWDD3S4R434 RNU6-1242P-201ENST00000391052 103 ntBASIC0.4□□□□□ -2.35
TMEM56-RWDD3S4R434 MTCO2P21-201ENST00000419780 677 ntBASIC0.4□□□□□ -2.35
TMEM56-RWDD3S4R434 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC0.4□□□□□ -2.35
TMEM56-RWDD3S4R434 USP9YP25-201ENST00000457708 443 ntBASIC0.4□□□□□ -2.35
TMEM56-RWDD3S4R434 SNRPFP3-201ENST00000457792 225 ntBASIC0.4□□□□□ -2.35
TMEM56-RWDD3S4R434 RNU6-498P-201ENST00000459468 107 ntBASIC0.4□□□□□ -2.35
TMEM56-RWDD3S4R434 RPS26P48-201ENST00000491713 339 ntBASIC0.4□□□□□ -2.35
TMEM56-RWDD3S4R434 AC008628.2-201ENST00000502605 298 ntBASIC0.4□□□□□ -2.35
TMEM56-RWDD3S4R434 RNU6-947P-201ENST00000516264 106 ntBASIC0.4□□□□□ -2.35
TMEM56-RWDD3S4R434 DEFB131C-201ENST00000528817 165 ntBASIC0.4□□□□□ -2.35
TMEM56-RWDD3S4R434 APOOP3-201ENST00000536787 586 ntBASIC0.4□□□□□ -2.35
TMEM56-RWDD3S4R434 AC091489.2-201ENST00000566263 604 ntBASIC0.4□□□□□ -2.35
TMEM56-RWDD3S4R434 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.4□□□□□ -2.35
TMEM56-RWDD3S4R434 AL031775.1-201ENST00000607014 887 ntBASIC0.4□□□□□ -2.35
TMEM56-RWDD3S4R434 AL603839.4-201ENST00000624658 1005 ntBASIC0.4□□□□□ -2.35
TMEM56-RWDD3S4R434 AL445984.1-201ENST00000637834 659 ntBASIC0.4□□□□□ -2.35
TMEM56-RWDD3S4R434 RNU6-1303P-201ENST00000364841 107 ntBASIC0.39□□□□□ -2.35
TMEM56-RWDD3S4R434 Y_RNA.287-201ENST00000364853 94 ntBASIC0.39□□□□□ -2.35
TMEM56-RWDD3S4R434 RNA5SP467-201ENST00000391274 118 ntBASIC0.39□□□□□ -2.35
TMEM56-RWDD3S4R434 MRPL42P2-201ENST00000403169 426 ntBASIC0.39□□□□□ -2.35
TMEM56-RWDD3S4R434 RN7SKP200-201ENST00000410564 320 ntBASIC0.39□□□□□ -2.35
TMEM56-RWDD3S4R434 AC090960.1-201ENST00000421072 306 ntBASIC0.39□□□□□ -2.35
TMEM56-RWDD3S4R434 TIMM9P3-201ENST00000428659 274 ntBASIC0.39□□□□□ -2.35
TMEM56-RWDD3S4R434 SRRM1P2-201ENST00000464531 1192 ntBASIC0.39□□□□□ -2.35
TMEM56-RWDD3S4R434 AL390123.1-201ENST00000603216 237 ntBASIC0.39□□□□□ -2.35
TMEM56-RWDD3S4R434 AC136443.5-201ENST00000603741 370 ntBASIC0.39□□□□□ -2.35
TMEM56-RWDD3S4R434 AC104458.1-201ENST00000608243 463 ntBASIC0.39□□□□□ -2.35
TMEM56-RWDD3S4R434 AL139418.1-201ENST00000613613 177 ntBASIC0.39□□□□□ -2.35
TMEM56-RWDD3S4R434 AC116165.2-201ENST00000616705 206 ntBASIC0.39□□□□□ -2.35
TMEM56-RWDD3S4R434 AL607023.1-201ENST00000620045 248 ntBASIC0.39□□□□□ -2.35
TMEM56-RWDD3S4R434 AL136221.1-201ENST00000621449 509 ntBASIC0.39□□□□□ -2.35
TMEM56-RWDD3S4R434 AC009541.1-201ENST00000438279 2662 ntBASIC0.38□□□□□ -2.35
TMEM56-RWDD3S4R434 RNU6-1093P-201ENST00000391194 107 ntBASIC0.38□□□□□ -2.35
TMEM56-RWDD3S4R434 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.38□□□□□ -2.35
TMEM56-RWDD3S4R434 AC012306.1-201ENST00000423267 114 ntBASIC0.38□□□□□ -2.35
TMEM56-RWDD3S4R434 AL035398.1-201ENST00000430869 322 ntBASIC0.38□□□□□ -2.35
TMEM56-RWDD3S4R434 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC0.38□□□□□ -2.35
TMEM56-RWDD3S4R434 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.38□□□□□ -2.35
TMEM56-RWDD3S4R434 AL162395.1-201ENST00000457882 422 ntBASIC0.38□□□□□ -2.35
TMEM56-RWDD3S4R434 AC116562.3-201ENST00000506136 177 ntBASIC0.38□□□□□ -2.35
TMEM56-RWDD3S4R434 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC0.38□□□□□ -2.35
TMEM56-RWDD3S4R434 RNU6-1069P-201ENST00000516612 133 ntBASIC0.38□□□□□ -2.35
TMEM56-RWDD3S4R434 AC068587.5-201ENST00000528506 175 ntBASIC0.38□□□□□ -2.35
TMEM56-RWDD3S4R434 AC018659.1-201ENST00000551083 169 ntBASIC0.38□□□□□ -2.35
TMEM56-RWDD3S4R434 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.38□□□□□ -2.35
TMEM56-RWDD3S4R434 AC080078.2-201ENST00000603766 501 ntBASIC0.38□□□□□ -2.35
TMEM56-RWDD3S4R434 AC069431.2-201ENST00000604149 1099 ntBASIC0.38□□□□□ -2.35
TMEM56-RWDD3S4R434 AL359999.1-201ENST00000604513 294 ntBASIC0.38□□□□□ -2.35
TMEM56-RWDD3S4R434 AL121992.2-201ENST00000606262 256 ntBASIC0.38□□□□□ -2.35
TMEM56-RWDD3S4R434 AC006001.4-201ENST00000622243 395 ntBASIC0.38□□□□□ -2.35
TMEM56-RWDD3S4R434 Y_RNA.18-201ENST00000362461 102 ntBASIC0.37□□□□□ -2.35
TMEM56-RWDD3S4R434 RNU6-660P-201ENST00000364566 109 ntBASIC0.37□□□□□ -2.35
TMEM56-RWDD3S4R434 SNORD115-7-201ENST00000365306 82 ntBASIC0.37□□□□□ -2.35
TMEM56-RWDD3S4R434 RNU6-157P-201ENST00000383957 107 ntBASIC0.37□□□□□ -2.35
TMEM56-RWDD3S4R434 RNU6-975P-201ENST00000384296 105 ntBASIC0.37□□□□□ -2.35
TMEM56-RWDD3S4R434 RNU2-8P-201ENST00000410727 190 ntBASIC0.37□□□□□ -2.35
TMEM56-RWDD3S4R434 AL117339.3-201ENST00000418733 162 ntBASIC0.37□□□□□ -2.35
TMEM56-RWDD3S4R434 MTATP6P16-201ENST00000434543 526 ntBASIC0.37□□□□□ -2.35
TMEM56-RWDD3S4R434 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC0.37□□□□□ -2.35
TMEM56-RWDD3S4R434 AC010486.2-201ENST00000505572 483 ntBASIC0.37□□□□□ -2.35
TMEM56-RWDD3S4R434 HMGB1P29-201ENST00000505659 499 ntBASIC0.37□□□□□ -2.35
TMEM56-RWDD3S4R434 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.37□□□□□ -2.35
TMEM56-RWDD3S4R434 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC0.37□□□□□ -2.35
TMEM56-RWDD3S4R434 FABP5P5-201ENST00000515537 406 ntBASIC0.37□□□□□ -2.35
TMEM56-RWDD3S4R434 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.37□□□□□ -2.35
TMEM56-RWDD3S4R434 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC0.37□□□□□ -2.35
TMEM56-RWDD3S4R434 Z99497.2-201ENST00000603634 310 ntBASIC0.37□□□□□ -2.35
TMEM56-RWDD3S4R434 AP001596.2-201ENST00000608410 312 ntBASIC0.37□□□□□ -2.35
TMEM56-RWDD3S4R434 AC104010.1-201ENST00000616889 150 ntBASIC0.37□□□□□ -2.35
TMEM56-RWDD3S4R434 SNORA43.4-201ENST00000629559 138 ntBASIC0.37□□□□□ -2.35
TMEM56-RWDD3S4R434 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.37□□□□□ -2.35
TMEM56-RWDD3S4R434 RNA5SP347-201ENST00000362445 119 ntBASIC0.36□□□□□ -2.35
TMEM56-RWDD3S4R434 RNU4-76P-201ENST00000364509 141 ntBASIC0.36□□□□□ -2.35
TMEM56-RWDD3S4R434 RNU6-715P-201ENST00000365204 103 ntBASIC0.36□□□□□ -2.35
TMEM56-RWDD3S4R434 MIR10B-201ENST00000385011 110 ntBASIC0.36□□□□□ -2.35
TMEM56-RWDD3S4R434 MIR549A-201ENST00000385268 96 ntBASIC0.36□□□□□ -2.35
TMEM56-RWDD3S4R434 SNORD41-201ENST00000386967 70 ntBASIC0.36□□□□□ -2.35
TMEM56-RWDD3S4R434 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.36□□□□□ -2.35
TMEM56-RWDD3S4R434 MIR1253-201ENST00000408273 105 ntBASIC0.36□□□□□ -2.35
TMEM56-RWDD3S4R434 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.36□□□□□ -2.35
TMEM56-RWDD3S4R434 AC114737.2-201ENST00000421583 173 ntBASIC0.36□□□□□ -2.35
TMEM56-RWDD3S4R434 AC244023.1-201ENST00000426884 112 ntBASIC0.36□□□□□ -2.35
TMEM56-RWDD3S4R434 RPEP5-201ENST00000441137 268 ntBASIC0.36□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms