Protein–RNA interactions for Protein: Q9Y5H1

PCDHGA2, Protocadherin gamma-A2, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA2Q9Y5H1 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.13□□□□□ -1.91
PCDHGA2Q9Y5H1 SNORA25.11-201ENST00000515935 105 ntBASIC3.13□□□□□ -1.91
PCDHGA2Q9Y5H1 SCARNA20.6-201ENST00000517251 106 ntBASIC3.13□□□□□ -1.91
PCDHGA2Q9Y5H1 AC034114.1-201ENST00000520293 285 ntBASIC3.13□□□□□ -1.91
PCDHGA2Q9Y5H1 AC131281.1-201ENST00000522984 164 ntBASIC3.13□□□□□ -1.91
PCDHGA2Q9Y5H1 EIF4A1P12-201ENST00000551910 141 ntBASIC3.13□□□□□ -1.91
PCDHGA2Q9Y5H1 AC105245.1-201ENST00000581934 244 ntBASIC3.13□□□□□ -1.91
PCDHGA2Q9Y5H1 AP000942.4-201ENST00000604811 241 ntBASIC3.13□□□□□ -1.91
PCDHGA2Q9Y5H1 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.13□□□□□ -1.91
PCDHGA2Q9Y5H1 MIR5739-201ENST00000619803 80 ntBASIC3.13□□□□□ -1.91
PCDHGA2Q9Y5H1 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
PCDHGA2Q9Y5H1 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
PCDHGA2Q9Y5H1 MIR148B-201ENST00000362252 99 ntBASIC3.12□□□□□ -1.91
PCDHGA2Q9Y5H1 RNU6-1301P-201ENST00000362724 104 ntBASIC3.12□□□□□ -1.91
PCDHGA2Q9Y5H1 Y_RNA.149-201ENST00000363558 117 ntBASIC3.12□□□□□ -1.91
PCDHGA2Q9Y5H1 RNU6-708P-201ENST00000384217 107 ntBASIC3.12□□□□□ -1.91
PCDHGA2Q9Y5H1 RNU6-1109P-201ENST00000391187 107 ntBASIC3.12□□□□□ -1.91
PCDHGA2Q9Y5H1 RNU6-1093P-201ENST00000391194 107 ntBASIC3.12□□□□□ -1.91
PCDHGA2Q9Y5H1 RNA5SP201-201ENST00000410316 124 ntBASIC3.12□□□□□ -1.91
PCDHGA2Q9Y5H1 RNA5SP229-201ENST00000410809 99 ntBASIC3.12□□□□□ -1.91
PCDHGA2Q9Y5H1 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.12□□□□□ -1.91
PCDHGA2Q9Y5H1 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.12□□□□□ -1.91
PCDHGA2Q9Y5H1 RPS15AP7-201ENST00000439294 405 ntBASIC3.12□□□□□ -1.91
PCDHGA2Q9Y5H1 AC096638.1-201ENST00000444678 216 ntBASIC3.12□□□□□ -1.91
PCDHGA2Q9Y5H1 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC3.12□□□□□ -1.91
PCDHGA2Q9Y5H1 UBL5P3-201ENST00000475112 231 ntBASIC3.12□□□□□ -1.91
PCDHGA2Q9Y5H1 RPS29P26-201ENST00000477483 171 ntBASIC3.12□□□□□ -1.91
PCDHGA2Q9Y5H1 RPL23AP70-201ENST00000483361 460 ntBASIC3.12□□□□□ -1.91
PCDHGA2Q9Y5H1 MRPS35P2-201ENST00000508242 191 ntBASIC3.12□□□□□ -1.91
PCDHGA2Q9Y5H1 RNU1-143P-201ENST00000516296 146 ntBASIC3.12□□□□□ -1.91
PCDHGA2Q9Y5H1 RNA5SP380-201ENST00000517190 98 ntBASIC3.12□□□□□ -1.91
PCDHGA2Q9Y5H1 AC026470.2-201ENST00000561492 181 ntBASIC3.12□□□□□ -1.91
PCDHGA2Q9Y5H1 MIR3199-1-201ENST00000582434 88 ntBASIC3.12□□□□□ -1.91
PCDHGA2Q9Y5H1 SNRPGP20-201ENST00000604477 205 ntBASIC3.12□□□□□ -1.91
PCDHGA2Q9Y5H1 AL121655.1-201ENST00000605811 308 ntBASIC3.12□□□□□ -1.91
PCDHGA2Q9Y5H1 U1.23-201ENST00000610293 146 ntBASIC3.12□□□□□ -1.91
PCDHGA2Q9Y5H1 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.12□□□□□ -1.91
PCDHGA2Q9Y5H1 PCGEM1.1-201ENST00000613431 131 ntBASIC3.12□□□□□ -1.91
PCDHGA2Q9Y5H1 uc_338.25-201ENST00000613756 156 ntBASIC3.12□□□□□ -1.91
PCDHGA2Q9Y5H1 RNU1-68P-201ENST00000615382 146 ntBASIC3.12□□□□□ -1.91
PCDHGA2Q9Y5H1 U1.39-201ENST00000621562 146 ntBASIC3.12□□□□□ -1.91
PCDHGA2Q9Y5H1 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.12□□□□□ -1.91
PCDHGA2Q9Y5H1 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
PCDHGA2Q9Y5H1 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.12□□□□□ -1.91
PCDHGA2Q9Y5H1 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PCDHGA2Q9Y5H1 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PCDHGA2Q9Y5H1 RNU4-15P-201ENST00000362613 141 ntBASIC3.11□□□□□ -1.91
PCDHGA2Q9Y5H1 RNA5SP240-201ENST00000365355 128 ntBASIC3.11□□□□□ -1.91
PCDHGA2Q9Y5H1 MIR10B-201ENST00000385011 110 ntBASIC3.11□□□□□ -1.91
PCDHGA2Q9Y5H1 MIR568-201ENST00000385036 95 ntBASIC3.11□□□□□ -1.91
PCDHGA2Q9Y5H1 AC063976.3-201ENST00000426849 329 ntBASIC3.11□□□□□ -1.91
PCDHGA2Q9Y5H1 RPL30P4-201ENST00000429309 333 ntBASIC3.11□□□□□ -1.91
PCDHGA2Q9Y5H1 WARS2P1-201ENST00000429678 537 ntBASIC3.11□□□□□ -1.91
PCDHGA2Q9Y5H1 AC009969.1-201ENST00000438726 172 ntBASIC3.11□□□□□ -1.91
PCDHGA2Q9Y5H1 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.11□□□□□ -1.91
PCDHGA2Q9Y5H1 AC140059.1-201ENST00000489238 361 ntBASIC3.11□□□□□ -1.91
PCDHGA2Q9Y5H1 AC023141.11-201ENST00000508864 202 ntBASIC3.11□□□□□ -1.91
PCDHGA2Q9Y5H1 RNA5SP385-201ENST00000515947 110 ntBASIC3.11□□□□□ -1.91
PCDHGA2Q9Y5H1 SNORA31.26-201ENST00000517250 137 ntBASIC3.11□□□□□ -1.91
PCDHGA2Q9Y5H1 AC022868.1-201ENST00000517767 391 ntBASIC3.11□□□□□ -1.91
PCDHGA2Q9Y5H1 HSPE1P20-201ENST00000538133 289 ntBASIC3.11□□□□□ -1.91
PCDHGA2Q9Y5H1 AC091544.4-201ENST00000555268 342 ntBASIC3.11□□□□□ -1.91
PCDHGA2Q9Y5H1 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
PCDHGA2Q9Y5H1 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.11□□□□□ -1.91
PCDHGA2Q9Y5H1 7SK.10-201ENST00000621414 298 ntBASIC3.11□□□□□ -1.91
PCDHGA2Q9Y5H1 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
PCDHGA2Q9Y5H1 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.11□□□□□ -1.91
PCDHGA2Q9Y5H1 AC080128.1-201ENST00000474389 1917 ntBASIC3.11□□□□□ -1.91
PCDHGA2Q9Y5H1 BX322639.1-202ENST00000423987 2213 ntBASIC3.1□□□□□ -1.91
PCDHGA2Q9Y5H1 MIR22-201ENST00000362190 85 ntBASIC3.1□□□□□ -1.91
PCDHGA2Q9Y5H1 Y_RNA.47-201ENST00000362697 108 ntBASIC3.1□□□□□ -1.91
PCDHGA2Q9Y5H1 Y_RNA.210-201ENST00000364161 110 ntBASIC3.1□□□□□ -1.91
PCDHGA2Q9Y5H1 RNU6-245P-201ENST00000384020 107 ntBASIC3.1□□□□□ -1.91
PCDHGA2Q9Y5H1 RNU6-281P-201ENST00000384212 103 ntBASIC3.1□□□□□ -1.91
PCDHGA2Q9Y5H1 RNU6-196P-201ENST00000384315 107 ntBASIC3.1□□□□□ -1.91
PCDHGA2Q9Y5H1 MIR218-1-201ENST00000384999 110 ntBASIC3.1□□□□□ -1.91
PCDHGA2Q9Y5H1 MIR487A-201ENST00000385009 80 ntBASIC3.1□□□□□ -1.91
PCDHGA2Q9Y5H1 RNU6-1328P-201ENST00000410938 106 ntBASIC3.1□□□□□ -1.91
PCDHGA2Q9Y5H1 SDAD1P3-201ENST00000427380 333 ntBASIC3.1□□□□□ -1.91
PCDHGA2Q9Y5H1 AL109933.2-201ENST00000452651 260 ntBASIC3.1□□□□□ -1.91
PCDHGA2Q9Y5H1 TRBV12-1-201ENST00000479785 344 ntBASIC3.1□□□□□ -1.91
PCDHGA2Q9Y5H1 AC145146.1-201ENST00000496370 254 ntBASIC3.1□□□□□ -1.91
PCDHGA2Q9Y5H1 RNU6-635P-201ENST00000516651 102 ntBASIC3.1□□□□□ -1.91
PCDHGA2Q9Y5H1 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.1□□□□□ -1.91
PCDHGA2Q9Y5H1 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.1□□□□□ -1.91
PCDHGA2Q9Y5H1 AC005296.1-201ENST00000616145 209 ntBASIC3.1□□□□□ -1.91
PCDHGA2Q9Y5H1 AC010205.1-201ENST00000616668 449 ntBASIC3.1□□□□□ -1.91
PCDHGA2Q9Y5H1 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.1□□□□□ -1.91
PCDHGA2Q9Y5H1 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.1□□□□□ -1.91
PCDHGA2Q9Y5H1 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
PCDHGA2Q9Y5H1 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
PCDHGA2Q9Y5H1 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
PCDHGA2Q9Y5H1 Y_RNA.458-201ENST00000384240 102 ntBASIC3.09□□□□□ -1.91
PCDHGA2Q9Y5H1 RNU6-611P-201ENST00000384276 104 ntBASIC3.09□□□□□ -1.91
PCDHGA2Q9Y5H1 Y_RNA.471-201ENST00000384312 102 ntBASIC3.09□□□□□ -1.91
PCDHGA2Q9Y5H1 RNU6-851P-201ENST00000384565 107 ntBASIC3.09□□□□□ -1.91
PCDHGA2Q9Y5H1 Y_RNA.574-201ENST00000384766 95 ntBASIC3.09□□□□□ -1.91
PCDHGA2Q9Y5H1 RPL21P2-201ENST00000440049 481 ntBASIC3.09□□□□□ -1.91
PCDHGA2Q9Y5H1 AC010469.2-201ENST00000496412 480 ntBASIC3.09□□□□□ -1.91
PCDHGA2Q9Y5H1 CKS1BP2-201ENST00000497342 240 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 178.7 ms