Protein–RNA interactions for Protein: Q9Y3P8

SIT1, Signaling threshold-regulating transmembrane adapter 1, humanhuman

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIT1Q9Y3P8 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.34□□□□□ -1.87
SIT1Q9Y3P8 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
SIT1Q9Y3P8 MIR448-201ENST00000362131 111 ntBASIC3.34□□□□□ -1.87
SIT1Q9Y3P8 RNA5SP42-201ENST00000364278 115 ntBASIC3.34□□□□□ -1.87
SIT1Q9Y3P8 Y_RNA.262-201ENST00000364641 102 ntBASIC3.34□□□□□ -1.87
SIT1Q9Y3P8 SNORD50.2-201ENST00000365465 70 ntBASIC3.34□□□□□ -1.87
SIT1Q9Y3P8 RNU6-198P-201ENST00000384258 104 ntBASIC3.34□□□□□ -1.87
SIT1Q9Y3P8 RNU6-394P-201ENST00000410735 107 ntBASIC3.34□□□□□ -1.87
SIT1Q9Y3P8 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.34□□□□□ -1.87
SIT1Q9Y3P8 RNA5SP309-201ENST00000516670 106 ntBASIC3.34□□□□□ -1.87
SIT1Q9Y3P8 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.34□□□□□ -1.87
SIT1Q9Y3P8 AC025946.2-201ENST00000603398 234 ntBASIC3.34□□□□□ -1.87
SIT1Q9Y3P8 RNVU1-4-201ENST00000612985 164 ntBASIC3.34□□□□□ -1.87
SIT1Q9Y3P8 PCGEM1.1-201ENST00000613431 131 ntBASIC3.34□□□□□ -1.87
SIT1Q9Y3P8 MIR6715A-201ENST00000615929 79 ntBASIC3.34□□□□□ -1.87
SIT1Q9Y3P8 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.34□□□□□ -1.87
SIT1Q9Y3P8 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC3.34□□□□□ -1.87
SIT1Q9Y3P8 AC021753.1-201ENST00000635724 168 ntBASIC3.34□□□□□ -1.87
SIT1Q9Y3P8 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.34□□□□□ -1.87
SIT1Q9Y3P8 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.88
SIT1Q9Y3P8 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.34□□□□□ -1.88
SIT1Q9Y3P8 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.34□□□□□ -1.88
SIT1Q9Y3P8 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.33□□□□□ -1.88
SIT1Q9Y3P8 AC010889.1-201ENST00000566193 2666 ntBASIC3.33□□□□□ -1.88
SIT1Q9Y3P8 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
SIT1Q9Y3P8 RNU6-529P-201ENST00000363383 104 ntBASIC3.33□□□□□ -1.88
SIT1Q9Y3P8 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.33□□□□□ -1.88
SIT1Q9Y3P8 MIR513A2-201ENST00000385249 127 ntBASIC3.33□□□□□ -1.88
SIT1Q9Y3P8 RNU6-750P-201ENST00000390946 107 ntBASIC3.33□□□□□ -1.88
SIT1Q9Y3P8 MIR548I2-201ENST00000408348 149 ntBASIC3.33□□□□□ -1.88
SIT1Q9Y3P8 AC009963.1-201ENST00000417265 157 ntBASIC3.33□□□□□ -1.88
SIT1Q9Y3P8 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.33□□□□□ -1.88
SIT1Q9Y3P8 AC006989.1-201ENST00000427212 131 ntBASIC3.33□□□□□ -1.88
SIT1Q9Y3P8 TMSB4XP3-201ENST00000445144 114 ntBASIC3.33□□□□□ -1.88
SIT1Q9Y3P8 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.33□□□□□ -1.88
SIT1Q9Y3P8 AC103975.1-201ENST00000482506 483 ntBASIC3.33□□□□□ -1.88
SIT1Q9Y3P8 RNU6-344P-201ENST00000516635 111 ntBASIC3.33□□□□□ -1.88
SIT1Q9Y3P8 AP000867.2-201ENST00000532468 320 ntBASIC3.33□□□□□ -1.88
SIT1Q9Y3P8 AP002001.1-203ENST00000534002 267 ntBASIC3.33□□□□□ -1.88
SIT1Q9Y3P8 MIR4308-201ENST00000580634 81 ntBASIC3.33□□□□□ -1.88
SIT1Q9Y3P8 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.33□□□□□ -1.88
SIT1Q9Y3P8 AL391813.1-201ENST00000603098 260 ntBASIC3.33□□□□□ -1.88
SIT1Q9Y3P8 AC005828.6-201ENST00000606610 232 ntBASIC3.33□□□□□ -1.88
SIT1Q9Y3P8 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.33□□□□□ -1.88
SIT1Q9Y3P8 AC068831.7-201ENST00000616954 363 ntBASIC3.33□□□□□ -1.88
SIT1Q9Y3P8 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.33□□□□□ -1.88
SIT1Q9Y3P8 AC092628.2-201ENST00000622492 339 ntBASIC3.33□□□□□ -1.88
SIT1Q9Y3P8 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SIT1Q9Y3P8 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SIT1Q9Y3P8 AC007496.3-201ENST00000624987 3443 ntBASIC3.33□□□□□ -1.88
SIT1Q9Y3P8 AC000403.1-201ENST00000613696 3585 ntBASIC3.33□□□□□ -1.88
SIT1Q9Y3P8 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.32□□□□□ -1.88
SIT1Q9Y3P8 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SIT1Q9Y3P8 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.32□□□□□ -1.88
SIT1Q9Y3P8 Y_RNA.40-201ENST00000362645 93 ntBASIC3.32□□□□□ -1.88
SIT1Q9Y3P8 SNORD114-19-201ENST00000363072 75 ntBASIC3.32□□□□□ -1.88
SIT1Q9Y3P8 RNU6-653P-201ENST00000363074 106 ntBASIC3.32□□□□□ -1.88
SIT1Q9Y3P8 RNU4-80P-201ENST00000363200 141 ntBASIC3.32□□□□□ -1.88
SIT1Q9Y3P8 RNU6-1264P-201ENST00000383891 107 ntBASIC3.32□□□□□ -1.88
SIT1Q9Y3P8 Y_RNA.441-201ENST00000384123 112 ntBASIC3.32□□□□□ -1.88
SIT1Q9Y3P8 RN7SKP51-201ENST00000410781 304 ntBASIC3.32□□□□□ -1.88
SIT1Q9Y3P8 RNA5SP306-201ENST00000411087 107 ntBASIC3.32□□□□□ -1.88
SIT1Q9Y3P8 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.32□□□□□ -1.88
SIT1Q9Y3P8 AC009237.7-201ENST00000447357 229 ntBASIC3.32□□□□□ -1.88
SIT1Q9Y3P8 AC091021.1-201ENST00000468051 388 ntBASIC3.32□□□□□ -1.88
SIT1Q9Y3P8 AC008885.1-201ENST00000514930 301 ntBASIC3.32□□□□□ -1.88
SIT1Q9Y3P8 RNU7-200P-201ENST00000516105 62 ntBASIC3.32□□□□□ -1.88
SIT1Q9Y3P8 RNU6-155P-201ENST00000516347 100 ntBASIC3.32□□□□□ -1.88
SIT1Q9Y3P8 RNU2-12P-201ENST00000517216 168 ntBASIC3.32□□□□□ -1.88
SIT1Q9Y3P8 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.32□□□□□ -1.88
SIT1Q9Y3P8 EIF4A1P12-201ENST00000551910 141 ntBASIC3.32□□□□□ -1.88
SIT1Q9Y3P8 TGIF1P1-201ENST00000558095 802 ntBASIC3.32□□□□□ -1.88
SIT1Q9Y3P8 MIR3945-201ENST00000581853 98 ntBASIC3.32□□□□□ -1.88
SIT1Q9Y3P8 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.32□□□□□ -1.88
SIT1Q9Y3P8 AC108706.1-201ENST00000611053 297 ntBASIC3.32□□□□□ -1.88
SIT1Q9Y3P8 AL365265.1-201ENST00000621045 234 ntBASIC3.32□□□□□ -1.88
SIT1Q9Y3P8 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
SIT1Q9Y3P8 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.32□□□□□ -1.88
SIT1Q9Y3P8 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
SIT1Q9Y3P8 AC093010.3-201ENST00000570269 15214 ntBASIC3.32□□□□□ -1.88
SIT1Q9Y3P8 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.31□□□□□ -1.88
SIT1Q9Y3P8 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.31□□□□□ -1.88
SIT1Q9Y3P8 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.31□□□□□ -1.88
SIT1Q9Y3P8 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.31□□□□□ -1.88
SIT1Q9Y3P8 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.31□□□□□ -1.88
SIT1Q9Y3P8 RNU6-923P-201ENST00000364753 107 ntBASIC3.31□□□□□ -1.88
SIT1Q9Y3P8 RNU6-211P-201ENST00000384047 107 ntBASIC3.31□□□□□ -1.88
SIT1Q9Y3P8 MIR613-201ENST00000385248 95 ntBASIC3.31□□□□□ -1.88
SIT1Q9Y3P8 SNORA40.19-201ENST00000390846 128 ntBASIC3.31□□□□□ -1.88
SIT1Q9Y3P8 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SIT1Q9Y3P8 RNA5SP475-201ENST00000410568 110 ntBASIC3.31□□□□□ -1.88
SIT1Q9Y3P8 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.31□□□□□ -1.88
SIT1Q9Y3P8 AL353705.1-201ENST00000433468 480 ntBASIC3.31□□□□□ -1.88
SIT1Q9Y3P8 AC026333.2-201ENST00000542164 106 ntBASIC3.31□□□□□ -1.88
SIT1Q9Y3P8 MIR3144-201ENST00000579460 79 ntBASIC3.31□□□□□ -1.88
SIT1Q9Y3P8 AC020914.4-201ENST00000597690 277 ntBASIC3.31□□□□□ -1.88
SIT1Q9Y3P8 snoU18.1-201ENST00000629629 71 ntBASIC3.31□□□□□ -1.88
SIT1Q9Y3P8 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
SIT1Q9Y3P8 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.31□□□□□ -1.88
SIT1Q9Y3P8 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 130.5 ms