Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
NOD1Q9Y239 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
NOD1Q9Y239 RNU6-1305P-201ENST00000364353 104 ntBASIC4.21□□□□□ -1.74
NOD1Q9Y239 Y_RNA.310-201ENST00000365063 113 ntBASIC4.21□□□□□ -1.74
NOD1Q9Y239 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
NOD1Q9Y239 HMGN2P7-201ENST00000456186 273 ntBASIC4.21□□□□□ -1.74
NOD1Q9Y239 MIR3922-201ENST00000585192 84 ntBASIC4.21□□□□□ -1.74
NOD1Q9Y239 AC244505.7-201ENST00000599675 272 ntBASIC4.21□□□□□ -1.74
NOD1Q9Y239 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.21□□□□□ -1.74
NOD1Q9Y239 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.21□□□□□ -1.74
NOD1Q9Y239 uc_338.14-201ENST00000613162 166 ntBASIC4.21□□□□□ -1.74
NOD1Q9Y239 uc_338.32-201ENST00000615087 172 ntBASIC4.21□□□□□ -1.74
NOD1Q9Y239 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.21□□□□□ -1.74
NOD1Q9Y239 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.21□□□□□ -1.74
NOD1Q9Y239 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.21□□□□□ -1.74
NOD1Q9Y239 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
NOD1Q9Y239 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
NOD1Q9Y239 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.21□□□□□ -1.74
NOD1Q9Y239 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
NOD1Q9Y239 RNU4-11P-201ENST00000365287 132 ntBASIC4.2□□□□□ -1.74
NOD1Q9Y239 MIR199A2-201ENST00000385289 110 ntBASIC4.2□□□□□ -1.74
NOD1Q9Y239 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.2□□□□□ -1.74
NOD1Q9Y239 AL139281.1-201ENST00000422120 335 ntBASIC4.2□□□□□ -1.74
NOD1Q9Y239 RPS29P2-201ENST00000479278 136 ntBASIC4.2□□□□□ -1.74
NOD1Q9Y239 RNU6-1007P-201ENST00000516586 107 ntBASIC4.2□□□□□ -1.74
NOD1Q9Y239 RNU6-453P-201ENST00000516819 85 ntBASIC4.2□□□□□ -1.74
NOD1Q9Y239 SNORA31.21-201ENST00000517180 77 ntBASIC4.2□□□□□ -1.74
NOD1Q9Y239 AC109810.1-201ENST00000534066 224 ntBASIC4.2□□□□□ -1.74
NOD1Q9Y239 CYP4A43P-201ENST00000568156 121 ntBASIC4.2□□□□□ -1.74
NOD1Q9Y239 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC4.2□□□□□ -1.74
NOD1Q9Y239 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC4.2□□□□□ -1.74
NOD1Q9Y239 AL773545.4-201ENST00000637262 310 ntBASIC4.2□□□□□ -1.74
NOD1Q9Y239 AL513478.4-201ENST00000641636 310 ntBASIC4.2□□□□□ -1.74
NOD1Q9Y239 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.2□□□□□ -1.74
NOD1Q9Y239 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
NOD1Q9Y239 AC010332.2-201ENST00000613083 1904 ntBASIC4.19□□□□□ -1.74
NOD1Q9Y239 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC4.19□□□□□ -1.74
NOD1Q9Y239 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.19□□□□□ -1.74
NOD1Q9Y239 RNA5SP295-201ENST00000362655 121 ntBASIC4.19□□□□□ -1.74
NOD1Q9Y239 RNU6-1205P-201ENST00000363625 106 ntBASIC4.19□□□□□ -1.74
NOD1Q9Y239 RNA5SP51-201ENST00000364750 119 ntBASIC4.19□□□□□ -1.74
NOD1Q9Y239 Y_RNA.361-201ENST00000365515 120 ntBASIC4.19□□□□□ -1.74
NOD1Q9Y239 RNU6-969P-201ENST00000383900 105 ntBASIC4.19□□□□□ -1.74
NOD1Q9Y239 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC4.19□□□□□ -1.74
NOD1Q9Y239 RNU7-141P-201ENST00000459304 62 ntBASIC4.19□□□□□ -1.74
NOD1Q9Y239 KRTAP13-6P-201ENST00000508999 371 ntBASIC4.19□□□□□ -1.74
NOD1Q9Y239 SCARNA8-201ENST00000515924 131 ntBASIC4.19□□□□□ -1.74
NOD1Q9Y239 SNORA70.12-201ENST00000516084 153 ntBASIC4.19□□□□□ -1.74
NOD1Q9Y239 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.19□□□□□ -1.74
NOD1Q9Y239 DNAJC19P2-201ENST00000593340 302 ntBASIC4.19□□□□□ -1.74
NOD1Q9Y239 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC4.19□□□□□ -1.74
NOD1Q9Y239 AC099778.2-201ENST00000610904 211 ntBASIC4.19□□□□□ -1.74
NOD1Q9Y239 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
NOD1Q9Y239 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.19□□□□□ -1.74
NOD1Q9Y239 OTUD4P1-201ENST00000237841 3067 ntBASIC4.19□□□□□ -1.74
NOD1Q9Y239 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
NOD1Q9Y239 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
NOD1Q9Y239 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.18□□□□□ -1.74
NOD1Q9Y239 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
NOD1Q9Y239 AC000403.1-201ENST00000613696 3585 ntBASIC4.18□□□□□ -1.74
NOD1Q9Y239 AK9-203ENST00000368948 2478 ntTSL 5 BASIC4.18□□□□□ -1.74
NOD1Q9Y239 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
NOD1Q9Y239 LINC02471-203ENST00000641941 4752 ntBASIC4.18□□□□□ -1.74
NOD1Q9Y239 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.18□□□□□ -1.74
NOD1Q9Y239 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.18□□□□□ -1.74
NOD1Q9Y239 MIR616-201ENST00000385293 97 ntBASIC4.18□□□□□ -1.74
NOD1Q9Y239 SNORA40-201ENST00000388090 126 ntBASIC4.18□□□□□ -1.74
NOD1Q9Y239 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
NOD1Q9Y239 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC4.18□□□□□ -1.74
NOD1Q9Y239 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.18□□□□□ -1.74
NOD1Q9Y239 SNORA25.12-201ENST00000516202 82 ntBASIC4.18□□□□□ -1.74
NOD1Q9Y239 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.18□□□□□ -1.74
NOD1Q9Y239 MIR3200-201ENST00000580767 85 ntBASIC4.18□□□□□ -1.74
NOD1Q9Y239 AL670379.2-201ENST00000604983 252 ntBASIC4.18□□□□□ -1.74
NOD1Q9Y239 RPL17P51-201ENST00000605218 238 ntBASIC4.18□□□□□ -1.74
NOD1Q9Y239 MIR7975-201ENST00000619350 68 ntBASIC4.18□□□□□ -1.74
NOD1Q9Y239 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.18□□□□□ -1.74
NOD1Q9Y239 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.18□□□□□ -1.74
NOD1Q9Y239 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
NOD1Q9Y239 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
NOD1Q9Y239 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC4.17□□□□□ -1.74
NOD1Q9Y239 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
NOD1Q9Y239 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
NOD1Q9Y239 IL33-202ENST00000417746 2327 ntTSL 2 BASIC4.17□□□□□ -1.74
NOD1Q9Y239 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.17□□□□□ -1.74
NOD1Q9Y239 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
NOD1Q9Y239 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
NOD1Q9Y239 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
NOD1Q9Y239 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
NOD1Q9Y239 RNU6-376P-201ENST00000384731 106 ntBASIC4.17□□□□□ -1.74
NOD1Q9Y239 RNVU1-14-201ENST00000384770 164 ntBASIC4.17□□□□□ -1.74
NOD1Q9Y239 MIR526A2-201ENST00000390198 65 ntBASIC4.17□□□□□ -1.74
NOD1Q9Y239 SNORA48.5-201ENST00000391143 135 ntBASIC4.17□□□□□ -1.74
NOD1Q9Y239 MIR513C-201ENST00000401352 84 ntBASIC4.17□□□□□ -1.74
NOD1Q9Y239 ATP5A1P2-201ENST00000412323 255 ntBASIC4.17□□□□□ -1.74
NOD1Q9Y239 RPL30P13-201ENST00000418873 348 ntBASIC4.17□□□□□ -1.74
NOD1Q9Y239 RBMY2UP-201ENST00000453474 324 ntBASIC4.17□□□□□ -1.74
NOD1Q9Y239 AC245047.8-201ENST00000456455 284 ntBASIC4.17□□□□□ -1.74
NOD1Q9Y239 SNORD105B-201ENST00000458770 79 ntBASIC4.17□□□□□ -1.74
NOD1Q9Y239 MIR5195-201ENST00000583555 115 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 196.5 ms