Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 MIR539-201ENST00000365690 78 ntBASIC4.63□□□□□ -1.67
ZC3H4Q9UPT8 RNU6-80P-201ENST00000384195 107 ntBASIC4.63□□□□□ -1.67
ZC3H4Q9UPT8 RNU6-376P-201ENST00000384731 106 ntBASIC4.63□□□□□ -1.67
ZC3H4Q9UPT8 AL121914.1-201ENST00000450188 156 ntBASIC4.63□□□□□ -1.67
ZC3H4Q9UPT8 AC245047.8-201ENST00000456455 284 ntBASIC4.63□□□□□ -1.67
ZC3H4Q9UPT8 RPL23AP70-201ENST00000483361 460 ntBASIC4.63□□□□□ -1.67
ZC3H4Q9UPT8 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.63□□□□□ -1.67
ZC3H4Q9UPT8 MIR5006-201ENST00000583027 110 ntBASIC4.63□□□□□ -1.67
ZC3H4Q9UPT8 AC005520.5-201ENST00000613926 164 ntBASIC4.63□□□□□ -1.67
ZC3H4Q9UPT8 AL356274.2-201ENST00000624379 3752 ntBASIC4.62□□□□□ -1.67
ZC3H4Q9UPT8 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
ZC3H4Q9UPT8 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.62□□□□□ -1.67
ZC3H4Q9UPT8 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
ZC3H4Q9UPT8 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC4.62□□□□□ -1.67
ZC3H4Q9UPT8 AC092435.3-201ENST00000565538 3654 ntBASIC4.62□□□□□ -1.67
ZC3H4Q9UPT8 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
ZC3H4Q9UPT8 SNORD115-30-201ENST00000364117 82 ntBASIC4.62□□□□□ -1.67
ZC3H4Q9UPT8 RNU6-1325P-201ENST00000364905 105 ntBASIC4.62□□□□□ -1.67
ZC3H4Q9UPT8 SNORA72.4-201ENST00000384174 132 ntBASIC4.62□□□□□ -1.67
ZC3H4Q9UPT8 MIR626-201ENST00000385032 94 ntBASIC4.62□□□□□ -1.67
ZC3H4Q9UPT8 RNU6-710P-201ENST00000410424 105 ntBASIC4.62□□□□□ -1.67
ZC3H4Q9UPT8 RN7SKP284-201ENST00000411002 343 ntBASIC4.62□□□□□ -1.67
ZC3H4Q9UPT8 AC004386.2-201ENST00000441858 148 ntBASIC4.62□□□□□ -1.67
ZC3H4Q9UPT8 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC4.62□□□□□ -1.67
ZC3H4Q9UPT8 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC4.62□□□□□ -1.67
ZC3H4Q9UPT8 Y_RNA.686-201ENST00000516548 134 ntBASIC4.62□□□□□ -1.67
ZC3H4Q9UPT8 AC112693.2-201ENST00000556538 232 ntBASIC4.62□□□□□ -1.67
ZC3H4Q9UPT8 AL360157.1-201ENST00000565962 87 ntBASIC4.62□□□□□ -1.67
ZC3H4Q9UPT8 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
ZC3H4Q9UPT8 AC005562.2-201ENST00000618264 111 ntBASIC4.62□□□□□ -1.67
ZC3H4Q9UPT8 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.62□□□□□ -1.67
ZC3H4Q9UPT8 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
ZC3H4Q9UPT8 AC068700.1-201ENST00000565862 3754 ntBASIC4.62□□□□□ -1.67
ZC3H4Q9UPT8 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.62□□□□□ -1.67
ZC3H4Q9UPT8 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
ZC3H4Q9UPT8 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.61□□□□□ -1.67
ZC3H4Q9UPT8 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
ZC3H4Q9UPT8 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.61□□□□□ -1.67
ZC3H4Q9UPT8 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
ZC3H4Q9UPT8 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
ZC3H4Q9UPT8 SCN1A-220ENST00000641603 12506 ntBASIC4.61□□□□□ -1.67
ZC3H4Q9UPT8 RNU6-969P-201ENST00000383900 105 ntBASIC4.61□□□□□ -1.67
ZC3H4Q9UPT8 Y_RNA.542-201ENST00000384641 111 ntBASIC4.61□□□□□ -1.67
ZC3H4Q9UPT8 PTGES3P4-201ENST00000426243 356 ntBASIC4.61□□□□□ -1.67
ZC3H4Q9UPT8 RN7SL429P-201ENST00000479090 223 ntBASIC4.61□□□□□ -1.67
ZC3H4Q9UPT8 RN7SL489P-201ENST00000486185 223 ntBASIC4.61□□□□□ -1.67
ZC3H4Q9UPT8 RN7SL327P-201ENST00000488659 223 ntBASIC4.61□□□□□ -1.67
ZC3H4Q9UPT8 RNU6-453P-201ENST00000516819 85 ntBASIC4.61□□□□□ -1.67
ZC3H4Q9UPT8 AC025281.1-201ENST00000567026 265 ntBASIC4.61□□□□□ -1.67
ZC3H4Q9UPT8 MIR3609-201ENST00000582661 80 ntBASIC4.61□□□□□ -1.67
ZC3H4Q9UPT8 MIR7851-201ENST00000610611 160 ntBASIC4.61□□□□□ -1.67
ZC3H4Q9UPT8 AC011603.4-201ENST00000611325 277 ntBASIC4.61□□□□□ -1.67
ZC3H4Q9UPT8 RN7SL853P-201ENST00000617250 223 ntBASIC4.61□□□□□ -1.67
ZC3H4Q9UPT8 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.61□□□□□ -1.67
ZC3H4Q9UPT8 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
ZC3H4Q9UPT8 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
ZC3H4Q9UPT8 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
ZC3H4Q9UPT8 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
ZC3H4Q9UPT8 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
ZC3H4Q9UPT8 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.6□□□□□ -1.67
ZC3H4Q9UPT8 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
ZC3H4Q9UPT8 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
ZC3H4Q9UPT8 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
ZC3H4Q9UPT8 RNU6-19P-201ENST00000384718 107 ntBASIC4.6□□□□□ -1.67
ZC3H4Q9UPT8 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
ZC3H4Q9UPT8 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC4.6□□□□□ -1.67
ZC3H4Q9UPT8 U3.44-201ENST00000458938 192 ntBASIC4.6□□□□□ -1.67
ZC3H4Q9UPT8 RNU2-27P-201ENST00000516185 142 ntBASIC4.6□□□□□ -1.67
ZC3H4Q9UPT8 EIF4BP1-201ENST00000554881 351 ntBASIC4.6□□□□□ -1.67
ZC3H4Q9UPT8 AL138880.2-201ENST00000616214 239 ntBASIC4.6□□□□□ -1.67
ZC3H4Q9UPT8 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.6□□□□□ -1.67
ZC3H4Q9UPT8 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
ZC3H4Q9UPT8 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.59□□□□□ -1.67
ZC3H4Q9UPT8 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.59□□□□□ -1.67
ZC3H4Q9UPT8 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.59□□□□□ -1.67
ZC3H4Q9UPT8 Y_RNA.341-201ENST00000365341 102 ntBASIC4.59□□□□□ -1.67
ZC3H4Q9UPT8 SNORA3C-201ENST00000408792 125 ntBASIC4.59□□□□□ -1.67
ZC3H4Q9UPT8 AC004866.1-201ENST00000411748 78 ntBASIC4.59□□□□□ -1.67
ZC3H4Q9UPT8 RNU6-711P-201ENST00000517255 106 ntBASIC4.59□□□□□ -1.67
ZC3H4Q9UPT8 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
ZC3H4Q9UPT8 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC4.59□□□□□ -1.67
ZC3H4Q9UPT8 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.59□□□□□ -1.67
ZC3H4Q9UPT8 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.59□□□□□ -1.67
ZC3H4Q9UPT8 GNRHR2P1-201ENST00000555315 631 ntBASIC4.59□□□□□ -1.67
ZC3H4Q9UPT8 AL391813.1-201ENST00000603098 260 ntBASIC4.59□□□□□ -1.67
ZC3H4Q9UPT8 TCL6_2.1-201ENST00000615162 119 ntBASIC4.59□□□□□ -1.67
ZC3H4Q9UPT8 AC068205.3-201ENST00000636385 468 ntBASIC4.59□□□□□ -1.67
ZC3H4Q9UPT8 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.59□□□□□ -1.68
ZC3H4Q9UPT8 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
ZC3H4Q9UPT8 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
ZC3H4Q9UPT8 FAM35DP-201ENST00000323387 2712 ntBASIC4.58□□□□□ -1.68
ZC3H4Q9UPT8 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
ZC3H4Q9UPT8 RNU6-1205P-201ENST00000363625 106 ntBASIC4.58□□□□□ -1.68
ZC3H4Q9UPT8 SNORA18.2-201ENST00000383865 132 ntBASIC4.58□□□□□ -1.68
ZC3H4Q9UPT8 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
ZC3H4Q9UPT8 RNU6-1077P-201ENST00000410506 102 ntBASIC4.58□□□□□ -1.68
ZC3H4Q9UPT8 CYCSP48-201ENST00000417124 323 ntBASIC4.58□□□□□ -1.68
ZC3H4Q9UPT8 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC4.58□□□□□ -1.68
ZC3H4Q9UPT8 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.58□□□□□ -1.68
ZC3H4Q9UPT8 snoU13.28-201ENST00000459235 104 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms