Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PDZRN3Q9UPQ7 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PDZRN3Q9UPQ7 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.92□□□□□ -1.62
PDZRN3Q9UPQ7 Y_RNA.310-201ENST00000365063 113 ntBASIC4.92□□□□□ -1.62
PDZRN3Q9UPQ7 RNU6-1276P-201ENST00000365372 104 ntBASIC4.92□□□□□ -1.62
PDZRN3Q9UPQ7 RNU6-144P-201ENST00000383951 107 ntBASIC4.92□□□□□ -1.62
PDZRN3Q9UPQ7 RNU6-793P-201ENST00000384233 104 ntBASIC4.92□□□□□ -1.62
PDZRN3Q9UPQ7 RNU6-72P-201ENST00000384285 79 ntBASIC4.92□□□□□ -1.62
PDZRN3Q9UPQ7 MIR3074-201ENST00000384885 81 ntBASIC4.92□□□□□ -1.62
PDZRN3Q9UPQ7 MIR570-201ENST00000384917 97 ntBASIC4.92□□□□□ -1.62
PDZRN3Q9UPQ7 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC4.92□□□□□ -1.62
PDZRN3Q9UPQ7 RPL39P40-201ENST00000445481 146 ntBASIC4.92□□□□□ -1.62
PDZRN3Q9UPQ7 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC4.92□□□□□ -1.62
PDZRN3Q9UPQ7 RNA5SP164-201ENST00000516533 110 ntBASIC4.92□□□□□ -1.62
PDZRN3Q9UPQ7 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.92□□□□□ -1.62
PDZRN3Q9UPQ7 SNRPGP20-201ENST00000604477 205 ntBASIC4.92□□□□□ -1.62
PDZRN3Q9UPQ7 MIR486-1-201ENST00000612171 68 ntBASIC4.92□□□□□ -1.62
PDZRN3Q9UPQ7 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.92□□□□□ -1.62
PDZRN3Q9UPQ7 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PDZRN3Q9UPQ7 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PDZRN3Q9UPQ7 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PDZRN3Q9UPQ7 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.91□□□□□ -1.62
PDZRN3Q9UPQ7 Y_RNA.49-201ENST00000362714 112 ntBASIC4.91□□□□□ -1.62
PDZRN3Q9UPQ7 SNORA79-201ENST00000408376 140 ntBASIC4.91□□□□□ -1.62
PDZRN3Q9UPQ7 MIR1278-201ENST00000408753 81 ntBASIC4.91□□□□□ -1.62
PDZRN3Q9UPQ7 RNA5SP56-201ENST00000410277 118 ntBASIC4.91□□□□□ -1.62
PDZRN3Q9UPQ7 SNORA19.1-201ENST00000410656 129 ntBASIC4.91□□□□□ -1.62
PDZRN3Q9UPQ7 AL135786.1-201ENST00000415892 214 ntBASIC4.91□□□□□ -1.62
PDZRN3Q9UPQ7 AP000705.1-201ENST00000454567 350 ntBASIC4.91□□□□□ -1.62
PDZRN3Q9UPQ7 snoU13.6-201ENST00000458785 104 ntBASIC4.91□□□□□ -1.62
PDZRN3Q9UPQ7 PPIAP15-201ENST00000479662 484 ntBASIC4.91□□□□□ -1.62
PDZRN3Q9UPQ7 RN7SL293P-201ENST00000481765 281 ntBASIC4.91□□□□□ -1.62
PDZRN3Q9UPQ7 RPL31P13-201ENST00000484151 370 ntBASIC4.91□□□□□ -1.62
PDZRN3Q9UPQ7 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.91□□□□□ -1.62
PDZRN3Q9UPQ7 AC107016.1-201ENST00000550463 337 ntBASIC4.91□□□□□ -1.62
PDZRN3Q9UPQ7 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC4.91□□□□□ -1.62
PDZRN3Q9UPQ7 AL022345.2-201ENST00000606307 135 ntBASIC4.91□□□□□ -1.62
PDZRN3Q9UPQ7 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.91□□□□□ -1.62
PDZRN3Q9UPQ7 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PDZRN3Q9UPQ7 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PDZRN3Q9UPQ7 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.91□□□□□ -1.62
PDZRN3Q9UPQ7 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PDZRN3Q9UPQ7 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PDZRN3Q9UPQ7 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PDZRN3Q9UPQ7 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
PDZRN3Q9UPQ7 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC4.9□□□□□ -1.62
PDZRN3Q9UPQ7 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC4.9□□□□□ -1.62
PDZRN3Q9UPQ7 FAM35DP-201ENST00000323387 2712 ntBASIC4.9□□□□□ -1.62
PDZRN3Q9UPQ7 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC4.9□□□□□ -1.62
PDZRN3Q9UPQ7 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.9□□□□□ -1.62
PDZRN3Q9UPQ7 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
PDZRN3Q9UPQ7 SNORD115-30-201ENST00000364117 82 ntBASIC4.9□□□□□ -1.63
PDZRN3Q9UPQ7 SNORA36A-201ENST00000384221 132 ntBASIC4.9□□□□□ -1.63
PDZRN3Q9UPQ7 AL590004.2-201ENST00000404787 371 ntBASIC4.9□□□□□ -1.63
PDZRN3Q9UPQ7 MIR1250-201ENST00000408098 113 ntBASIC4.9□□□□□ -1.63
PDZRN3Q9UPQ7 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.9□□□□□ -1.63
PDZRN3Q9UPQ7 AL035423.1-201ENST00000420331 213 ntBASIC4.9□□□□□ -1.63
PDZRN3Q9UPQ7 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.9□□□□□ -1.63
PDZRN3Q9UPQ7 AC009237.8-201ENST00000445492 379 ntBASIC4.9□□□□□ -1.63
PDZRN3Q9UPQ7 RPS4XP2-201ENST00000458402 793 ntBASIC4.9□□□□□ -1.63
PDZRN3Q9UPQ7 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.9□□□□□ -1.63
PDZRN3Q9UPQ7 RN7SKP18-201ENST00000516005 275 ntBASIC4.9□□□□□ -1.63
PDZRN3Q9UPQ7 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PDZRN3Q9UPQ7 AC019288.1-201ENST00000557918 224 ntBASIC4.9□□□□□ -1.63
PDZRN3Q9UPQ7 RMST_8.1-201ENST00000610287 165 ntBASIC4.9□□□□□ -1.63
PDZRN3Q9UPQ7 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC4.9□□□□□ -1.63
PDZRN3Q9UPQ7 MESTIT1_1.1-201ENST00000618871 140 ntBASIC4.9□□□□□ -1.63
PDZRN3Q9UPQ7 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.9□□□□□ -1.63
PDZRN3Q9UPQ7 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PDZRN3Q9UPQ7 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
PDZRN3Q9UPQ7 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
PDZRN3Q9UPQ7 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.89□□□□□ -1.63
PDZRN3Q9UPQ7 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
PDZRN3Q9UPQ7 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.89□□□□□ -1.63
PDZRN3Q9UPQ7 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.89□□□□□ -1.63
PDZRN3Q9UPQ7 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.89□□□□□ -1.63
PDZRN3Q9UPQ7 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PDZRN3Q9UPQ7 RNU6-1285P-201ENST00000363480 105 ntBASIC4.89□□□□□ -1.63
PDZRN3Q9UPQ7 RNU6-497P-201ENST00000365316 104 ntBASIC4.89□□□□□ -1.63
PDZRN3Q9UPQ7 Y_RNA.456-201ENST00000384232 111 ntBASIC4.89□□□□□ -1.63
PDZRN3Q9UPQ7 MIR634-201ENST00000385208 97 ntBASIC4.89□□□□□ -1.63
PDZRN3Q9UPQ7 RNU6-855P-201ENST00000410395 104 ntBASIC4.89□□□□□ -1.63
PDZRN3Q9UPQ7 AC023141.12-201ENST00000512399 199 ntBASIC4.89□□□□□ -1.63
PDZRN3Q9UPQ7 SNORA43.2-201ENST00000516652 128 ntBASIC4.89□□□□□ -1.63
PDZRN3Q9UPQ7 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC4.89□□□□□ -1.63
PDZRN3Q9UPQ7 AC006065.5-201ENST00000623427 349 ntBASIC4.89□□□□□ -1.63
PDZRN3Q9UPQ7 SCARNA4-202ENST00000625402 129 ntBASIC4.89□□□□□ -1.63
PDZRN3Q9UPQ7 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.89□□□□□ -1.63
PDZRN3Q9UPQ7 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PDZRN3Q9UPQ7 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
PDZRN3Q9UPQ7 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.88□□□□□ -1.63
PDZRN3Q9UPQ7 SNORA63.5-201ENST00000363548 123 ntBASIC4.88□□□□□ -1.63
PDZRN3Q9UPQ7 Y_RNA.341-201ENST00000365341 102 ntBASIC4.88□□□□□ -1.63
PDZRN3Q9UPQ7 HMGN2P8-201ENST00000391458 268 ntBASIC4.88□□□□□ -1.63
PDZRN3Q9UPQ7 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PDZRN3Q9UPQ7 CALM2P4-201ENST00000430810 426 ntBASIC4.88□□□□□ -1.63
PDZRN3Q9UPQ7 AL078601.1-201ENST00000444542 271 ntBASIC4.88□□□□□ -1.63
PDZRN3Q9UPQ7 RNU6-893P-201ENST00000458841 100 ntBASIC4.88□□□□□ -1.63
PDZRN3Q9UPQ7 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.88□□□□□ -1.63
PDZRN3Q9UPQ7 RNU6-197P-201ENST00000516680 100 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms