Protein–RNA interactions for Protein: Q9UPN6

SCAF8, Protein SCAF8, humanhuman

Known RBP Predictions only

Length 1,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8Q9UPN6 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
SCAF8Q9UPN6 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SCAF8Q9UPN6 MTND5P9-201ENST00000503854 1755 ntBASIC3□□□□□ -1.93
SCAF8Q9UPN6 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3□□□□□ -1.93
SCAF8Q9UPN6 SNORD50.1-201ENST00000362987 71 ntBASIC3□□□□□ -1.93
SCAF8Q9UPN6 RNU6-486P-201ENST00000363116 107 ntBASIC3□□□□□ -1.93
SCAF8Q9UPN6 RNU6-595P-201ENST00000363944 107 ntBASIC3□□□□□ -1.93
SCAF8Q9UPN6 SNORD14.1-201ENST00000365609 90 ntBASIC3□□□□□ -1.93
SCAF8Q9UPN6 RNU6-1109P-201ENST00000391187 107 ntBASIC3□□□□□ -1.93
SCAF8Q9UPN6 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
SCAF8Q9UPN6 AP000275.1-201ENST00000411943 390 ntBASIC3□□□□□ -1.93
SCAF8Q9UPN6 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3□□□□□ -1.93
SCAF8Q9UPN6 CYCSP48-201ENST00000417124 323 ntBASIC3□□□□□ -1.93
SCAF8Q9UPN6 AC097463.2-201ENST00000421074 142 ntBASIC3□□□□□ -1.93
SCAF8Q9UPN6 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3□□□□□ -1.93
SCAF8Q9UPN6 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3□□□□□ -1.93
SCAF8Q9UPN6 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3□□□□□ -1.93
SCAF8Q9UPN6 AC243964.1-201ENST00000441814 261 ntBASIC3□□□□□ -1.93
SCAF8Q9UPN6 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3□□□□□ -1.93
SCAF8Q9UPN6 AL353705.4-201ENST00000449661 238 ntBASIC3□□□□□ -1.93
SCAF8Q9UPN6 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3□□□□□ -1.93
SCAF8Q9UPN6 AP001324.2-201ENST00000461163 319 ntBASIC3□□□□□ -1.93
SCAF8Q9UPN6 RPL36AP48-201ENST00000485521 314 ntBASIC3□□□□□ -1.93
SCAF8Q9UPN6 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3□□□□□ -1.93
SCAF8Q9UPN6 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3□□□□□ -1.93
SCAF8Q9UPN6 IGKV3-31-201ENST00000523109 329 ntBASIC3□□□□□ -1.93
SCAF8Q9UPN6 AC115990.1-201ENST00000526957 301 ntBASIC3□□□□□ -1.93
SCAF8Q9UPN6 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3□□□□□ -1.93
SCAF8Q9UPN6 AC110588.1-201ENST00000559699 137 ntBASIC3□□□□□ -1.93
SCAF8Q9UPN6 AC004584.2-201ENST00000570407 410 ntBASIC3□□□□□ -1.93
SCAF8Q9UPN6 AC016727.2-201ENST00000603988 621 ntBASIC3□□□□□ -1.93
SCAF8Q9UPN6 AL355297.3-201ENST00000604082 446 ntBASIC3□□□□□ -1.93
SCAF8Q9UPN6 Z98751.3-201ENST00000604447 521 ntBASIC3□□□□□ -1.93
SCAF8Q9UPN6 AL021879.1-201ENST00000611756 288 ntBASIC3□□□□□ -1.93
SCAF8Q9UPN6 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3□□□□□ -1.93
SCAF8Q9UPN6 AL138825.1-201ENST00000618587 192 ntBASIC3□□□□□ -1.93
SCAF8Q9UPN6 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3□□□□□ -1.93
SCAF8Q9UPN6 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SCAF8Q9UPN6 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3□□□□□ -1.93
SCAF8Q9UPN6 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3□□□□□ -1.93
SCAF8Q9UPN6 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3□□□□□ -1.93
SCAF8Q9UPN6 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3□□□□□ -1.93
SCAF8Q9UPN6 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
SCAF8Q9UPN6 RNU6-702P-201ENST00000364982 107 ntBASIC2.99□□□□□ -1.93
SCAF8Q9UPN6 MIR625-201ENST00000385047 85 ntBASIC2.99□□□□□ -1.93
SCAF8Q9UPN6 MIR1252-201ENST00000408861 65 ntBASIC2.99□□□□□ -1.93
SCAF8Q9UPN6 HMGN2P3-201ENST00000433603 273 ntBASIC2.99□□□□□ -1.93
SCAF8Q9UPN6 HMGN2P5-201ENST00000436882 273 ntBASIC2.99□□□□□ -1.93
SCAF8Q9UPN6 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.99□□□□□ -1.93
SCAF8Q9UPN6 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.99□□□□□ -1.93
SCAF8Q9UPN6 snoU13.23-201ENST00000458863 104 ntBASIC2.99□□□□□ -1.93
SCAF8Q9UPN6 RNU7-169P-201ENST00000459456 61 ntBASIC2.99□□□□□ -1.93
SCAF8Q9UPN6 RPS29P27-201ENST00000463711 170 ntBASIC2.99□□□□□ -1.93
SCAF8Q9UPN6 SCARNA17.1-201ENST00000516211 143 ntBASIC2.99□□□□□ -1.93
SCAF8Q9UPN6 SCARNA17.2-201ENST00000516334 143 ntBASIC2.99□□□□□ -1.93
SCAF8Q9UPN6 AC131281.1-201ENST00000522984 164 ntBASIC2.99□□□□□ -1.93
SCAF8Q9UPN6 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.99□□□□□ -1.93
SCAF8Q9UPN6 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.99□□□□□ -1.93
SCAF8Q9UPN6 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.99□□□□□ -1.93
SCAF8Q9UPN6 AC009318.2-201ENST00000610917 651 ntBASIC2.99□□□□□ -1.93
SCAF8Q9UPN6 SCARNA17.4-201ENST00000614296 143 ntBASIC2.99□□□□□ -1.93
SCAF8Q9UPN6 AL355596.1-201ENST00000565399 3996 ntBASIC2.98□□□□□ -1.93
SCAF8Q9UPN6 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SCAF8Q9UPN6 RNU6-227P-201ENST00000362865 103 ntBASIC2.98□□□□□ -1.93
SCAF8Q9UPN6 RNA5SP210-201ENST00000391034 120 ntBASIC2.98□□□□□ -1.93
SCAF8Q9UPN6 BTF3L4P2-201ENST00000392798 346 ntBASIC2.98□□□□□ -1.93
SCAF8Q9UPN6 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SCAF8Q9UPN6 AC138623.1-201ENST00000418060 216 ntBASIC2.98□□□□□ -1.93
SCAF8Q9UPN6 AC092423.1-201ENST00000430165 186 ntBASIC2.98□□□□□ -1.93
SCAF8Q9UPN6 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SCAF8Q9UPN6 OR2AQ1P-201ENST00000451972 200 ntBASIC2.98□□□□□ -1.93
SCAF8Q9UPN6 AC079354.2-201ENST00000453523 154 ntBASIC2.98□□□□□ -1.93
SCAF8Q9UPN6 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.98□□□□□ -1.93
SCAF8Q9UPN6 SNORA31.6-201ENST00000516241 130 ntBASIC2.98□□□□□ -1.93
SCAF8Q9UPN6 RNA5SP281-201ENST00000516504 135 ntBASIC2.98□□□□□ -1.93
SCAF8Q9UPN6 AC040926.1-201ENST00000530195 238 ntBASIC2.98□□□□□ -1.93
SCAF8Q9UPN6 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.98□□□□□ -1.93
SCAF8Q9UPN6 AC006600.1-201ENST00000572529 153 ntBASIC2.98□□□□□ -1.93
SCAF8Q9UPN6 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.98□□□□□ -1.93
SCAF8Q9UPN6 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.98□□□□□ -1.93
SCAF8Q9UPN6 MIR7515-201ENST00000637837 67 ntBASIC2.98□□□□□ -1.93
SCAF8Q9UPN6 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SCAF8Q9UPN6 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.98□□□□□ -1.93
SCAF8Q9UPN6 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
SCAF8Q9UPN6 AP000560.1-201ENST00000624150 1937 ntBASIC2.97□□□□□ -1.93
SCAF8Q9UPN6 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.97□□□□□ -1.93
SCAF8Q9UPN6 Y_RNA.210-201ENST00000364161 110 ntBASIC2.97□□□□□ -1.93
SCAF8Q9UPN6 RNU6-1141P-201ENST00000364520 107 ntBASIC2.97□□□□□ -1.93
SCAF8Q9UPN6 Y_RNA.512-201ENST00000384518 102 ntBASIC2.97□□□□□ -1.93
SCAF8Q9UPN6 AC007064.1-201ENST00000412238 351 ntBASIC2.97□□□□□ -1.93
SCAF8Q9UPN6 AC078809.1-201ENST00000427601 140 ntBASIC2.97□□□□□ -1.93
SCAF8Q9UPN6 snoU13.14-201ENST00000459372 104 ntBASIC2.97□□□□□ -1.93
SCAF8Q9UPN6 AC093852.1-201ENST00000503587 266 ntBASIC2.97□□□□□ -1.93
SCAF8Q9UPN6 AC234781.5-201ENST00000508429 271 ntBASIC2.97□□□□□ -1.93
SCAF8Q9UPN6 Y_RNA.715-201ENST00000517082 110 ntBASIC2.97□□□□□ -1.93
SCAF8Q9UPN6 AC144568.1-201ENST00000520139 137 ntBASIC2.97□□□□□ -1.93
SCAF8Q9UPN6 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.97□□□□□ -1.93
SCAF8Q9UPN6 AC016256.1-201ENST00000547971 354 ntBASIC2.97□□□□□ -1.93
SCAF8Q9UPN6 VN1R91P-201ENST00000594377 169 ntBASIC2.97□□□□□ -1.93
SCAF8Q9UPN6 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms