Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 Y_RNA.572-201ENST00000384757 98 ntBASIC3.73□□□□□ -1.81
AP4E1Q9UPM8 AL355497.1-201ENST00000406262 551 ntBASIC3.73□□□□□ -1.81
AP4E1Q9UPM8 ATP5A1P2-201ENST00000412323 255 ntBASIC3.73□□□□□ -1.81
AP4E1Q9UPM8 AL035423.1-201ENST00000420331 213 ntBASIC3.73□□□□□ -1.81
AP4E1Q9UPM8 RNA5SP310-201ENST00000459084 116 ntBASIC3.73□□□□□ -1.81
AP4E1Q9UPM8 RPL23AP70-201ENST00000483361 460 ntBASIC3.73□□□□□ -1.81
AP4E1Q9UPM8 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.73□□□□□ -1.81
AP4E1Q9UPM8 RNU6-579P-201ENST00000516879 102 ntBASIC3.73□□□□□ -1.81
AP4E1Q9UPM8 AC022616.8-201ENST00000533569 253 ntBASIC3.73□□□□□ -1.81
AP4E1Q9UPM8 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.73□□□□□ -1.81
AP4E1Q9UPM8 DNAJC19P2-201ENST00000593340 302 ntBASIC3.73□□□□□ -1.81
AP4E1Q9UPM8 RPS15AP11-201ENST00000594193 385 ntBASIC3.73□□□□□ -1.81
AP4E1Q9UPM8 AL137843.1-201ENST00000605078 385 ntBASIC3.73□□□□□ -1.81
AP4E1Q9UPM8 AL121772.2-201ENST00000614331 297 ntBASIC3.73□□□□□ -1.81
AP4E1Q9UPM8 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.73□□□□□ -1.81
AP4E1Q9UPM8 AC005562.2-201ENST00000618264 111 ntBASIC3.73□□□□□ -1.81
AP4E1Q9UPM8 AC068205.3-201ENST00000636385 468 ntBASIC3.73□□□□□ -1.81
AP4E1Q9UPM8 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
AP4E1Q9UPM8 AC004944.1-201ENST00000517807 3059 ntBASIC3.73□□□□□ -1.81
AP4E1Q9UPM8 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
AP4E1Q9UPM8 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.72□□□□□ -1.81
AP4E1Q9UPM8 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.72□□□□□ -1.81
AP4E1Q9UPM8 SNORD9-201ENST00000362566 104 ntBASIC3.72□□□□□ -1.81
AP4E1Q9UPM8 RNA5SP124-201ENST00000362739 110 ntBASIC3.72□□□□□ -1.81
AP4E1Q9UPM8 RNU6-1048P-201ENST00000364054 107 ntBASIC3.72□□□□□ -1.81
AP4E1Q9UPM8 SNORA8.3-201ENST00000384679 139 ntBASIC3.72□□□□□ -1.81
AP4E1Q9UPM8 AL133475.1-201ENST00000404414 305 ntBASIC3.72□□□□□ -1.81
AP4E1Q9UPM8 RPL30P13-201ENST00000418873 348 ntBASIC3.72□□□□□ -1.81
AP4E1Q9UPM8 AIMP1P2-201ENST00000425294 312 ntBASIC3.72□□□□□ -1.81
AP4E1Q9UPM8 HMGN2P20-201ENST00000437531 273 ntBASIC3.72□□□□□ -1.81
AP4E1Q9UPM8 AC107626.1-201ENST00000471084 183 ntBASIC3.72□□□□□ -1.81
AP4E1Q9UPM8 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.72□□□□□ -1.81
AP4E1Q9UPM8 SNORD19.2-201ENST00000516978 73 ntBASIC3.72□□□□□ -1.81
AP4E1Q9UPM8 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.72□□□□□ -1.81
AP4E1Q9UPM8 AC109810.1-201ENST00000534066 224 ntBASIC3.72□□□□□ -1.81
AP4E1Q9UPM8 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.72□□□□□ -1.81
AP4E1Q9UPM8 AC105137.2-201ENST00000569073 466 ntBASIC3.72□□□□□ -1.81
AP4E1Q9UPM8 MIR3609-201ENST00000582661 80 ntBASIC3.72□□□□□ -1.81
AP4E1Q9UPM8 HSPE1P7-201ENST00000604681 321 ntBASIC3.72□□□□□ -1.81
AP4E1Q9UPM8 AF127577.6-201ENST00000623352 2191 ntBASIC3.72□□□□□ -1.81
AP4E1Q9UPM8 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
AP4E1Q9UPM8 RNU4-15P-201ENST00000362613 141 ntBASIC3.71□□□□□ -1.82
AP4E1Q9UPM8 RNU6-1010P-201ENST00000362757 107 ntBASIC3.71□□□□□ -1.82
AP4E1Q9UPM8 RNU6-529P-201ENST00000363383 104 ntBASIC3.71□□□□□ -1.82
AP4E1Q9UPM8 Y_RNA.243-201ENST00000364481 109 ntBASIC3.71□□□□□ -1.82
AP4E1Q9UPM8 SNORD116-14-201ENST00000383894 92 ntBASIC3.71□□□□□ -1.82
AP4E1Q9UPM8 SNORD116-17-201ENST00000383929 92 ntBASIC3.71□□□□□ -1.82
AP4E1Q9UPM8 SNORD116-15-201ENST00000384445 92 ntBASIC3.71□□□□□ -1.82
AP4E1Q9UPM8 SNORD116-19-201ENST00000384729 92 ntBASIC3.71□□□□□ -1.82
AP4E1Q9UPM8 RNU6ATAC-201ENST00000408749 126 ntBASIC3.71□□□□□ -1.82
AP4E1Q9UPM8 SNORA11-201ENST00000408789 128 ntBASIC3.71□□□□□ -1.82
AP4E1Q9UPM8 RN7SKP202-201ENST00000410439 330 ntBASIC3.71□□□□□ -1.82
AP4E1Q9UPM8 TOMM22P2-201ENST00000430735 237 ntBASIC3.71□□□□□ -1.82
AP4E1Q9UPM8 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
AP4E1Q9UPM8 AC004386.2-201ENST00000441858 148 ntBASIC3.71□□□□□ -1.82
AP4E1Q9UPM8 AC074290.1-201ENST00000448883 135 ntBASIC3.71□□□□□ -1.82
AP4E1Q9UPM8 HMGN2P7-201ENST00000456186 273 ntBASIC3.71□□□□□ -1.82
AP4E1Q9UPM8 SCARNA8-201ENST00000515924 131 ntBASIC3.71□□□□□ -1.82
AP4E1Q9UPM8 RNU6-1333P-201ENST00000516162 93 ntBASIC3.71□□□□□ -1.82
AP4E1Q9UPM8 SNORA70.18-201ENST00000516696 98 ntBASIC3.71□□□□□ -1.82
AP4E1Q9UPM8 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.71□□□□□ -1.82
AP4E1Q9UPM8 EIF4A1P12-201ENST00000551910 141 ntBASIC3.71□□□□□ -1.82
AP4E1Q9UPM8 AC074050.1-201ENST00000563247 211 ntBASIC3.71□□□□□ -1.82
AP4E1Q9UPM8 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.71□□□□□ -1.82
AP4E1Q9UPM8 TCL6_2.1-201ENST00000615162 119 ntBASIC3.71□□□□□ -1.82
AP4E1Q9UPM8 AC018692.3-201ENST00000623929 123 ntBASIC3.71□□□□□ -1.82
AP4E1Q9UPM8 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
AP4E1Q9UPM8 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
AP4E1Q9UPM8 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.7□□□□□ -1.82
AP4E1Q9UPM8 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
AP4E1Q9UPM8 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.7□□□□□ -1.82
AP4E1Q9UPM8 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
AP4E1Q9UPM8 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
AP4E1Q9UPM8 Y_RNA.71-201ENST00000362892 104 ntBASIC3.7□□□□□ -1.82
AP4E1Q9UPM8 Y_RNA.368-201ENST00000365547 113 ntBASIC3.7□□□□□ -1.82
AP4E1Q9UPM8 SNORA20-201ENST00000384662 132 ntBASIC3.7□□□□□ -1.82
AP4E1Q9UPM8 AC002075.2-201ENST00000425207 252 ntBASIC3.7□□□□□ -1.82
AP4E1Q9UPM8 RPL23AP82-202ENST00000427528 469 ntBASIC3.7□□□□□ -1.82
AP4E1Q9UPM8 AC027124.2-201ENST00000428249 105 ntBASIC3.7□□□□□ -1.82
AP4E1Q9UPM8 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.7□□□□□ -1.82
AP4E1Q9UPM8 RPS29P31-201ENST00000446147 164 ntBASIC3.7□□□□□ -1.82
AP4E1Q9UPM8 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.7□□□□□ -1.82
AP4E1Q9UPM8 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.7□□□□□ -1.82
AP4E1Q9UPM8 RNU1-45P-201ENST00000517191 141 ntBASIC3.7□□□□□ -1.82
AP4E1Q9UPM8 RNU6-91P-201ENST00000607774 107 ntBASIC3.7□□□□□ -1.82
AP4E1Q9UPM8 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
AP4E1Q9UPM8 TNPO1P3-201ENST00000436471 2662 ntBASIC3.7□□□□□ -1.82
AP4E1Q9UPM8 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
AP4E1Q9UPM8 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
AP4E1Q9UPM8 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
AP4E1Q9UPM8 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.69□□□□□ -1.82
AP4E1Q9UPM8 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
AP4E1Q9UPM8 AC002546.1-201ENST00000588041 2504 ntBASIC3.69□□□□□ -1.82
AP4E1Q9UPM8 Y_RNA.172-201ENST00000363765 102 ntBASIC3.69□□□□□ -1.82
AP4E1Q9UPM8 Y_RNA.293-201ENST00000364908 93 ntBASIC3.69□□□□□ -1.82
AP4E1Q9UPM8 RNU6-19P-201ENST00000384718 107 ntBASIC3.69□□□□□ -1.82
AP4E1Q9UPM8 RNU6-376P-201ENST00000384731 106 ntBASIC3.69□□□□□ -1.82
AP4E1Q9UPM8 MIR554-201ENST00000384874 96 ntBASIC3.69□□□□□ -1.82
AP4E1Q9UPM8 MIR513C-201ENST00000401352 84 ntBASIC3.69□□□□□ -1.82
AP4E1Q9UPM8 RNU6-710P-201ENST00000410424 105 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms