Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 AC009033.1-201ENST00000624279 431 ntBASIC3.46□□□□□ -1.86
SHROOM4Q9ULL8 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SHROOM4Q9ULL8 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
SHROOM4Q9ULL8 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.45□□□□□ -1.86
SHROOM4Q9ULL8 RNU6-1252P-201ENST00000363054 104 ntBASIC3.45□□□□□ -1.86
SHROOM4Q9ULL8 RNU6-743P-201ENST00000364151 106 ntBASIC3.45□□□□□ -1.86
SHROOM4Q9ULL8 Y_RNA.414-201ENST00000384011 101 ntBASIC3.45□□□□□ -1.86
SHROOM4Q9ULL8 RNU6-1013P-201ENST00000384180 107 ntBASIC3.45□□□□□ -1.86
SHROOM4Q9ULL8 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.45□□□□□ -1.86
SHROOM4Q9ULL8 PRELID3BP1-201ENST00000457142 540 ntBASIC3.45□□□□□ -1.86
SHROOM4Q9ULL8 AC091874.1-201ENST00000511402 339 ntBASIC3.45□□□□□ -1.86
SHROOM4Q9ULL8 RNU6-256P-201ENST00000516747 97 ntBASIC3.45□□□□□ -1.86
SHROOM4Q9ULL8 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.45□□□□□ -1.86
SHROOM4Q9ULL8 EIF4A1P12-201ENST00000551910 141 ntBASIC3.45□□□□□ -1.86
SHROOM4Q9ULL8 FGF7P1-201ENST00000582820 288 ntBASIC3.45□□□□□ -1.86
SHROOM4Q9ULL8 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
SHROOM4Q9ULL8 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
SHROOM4Q9ULL8 MIR29C-201ENST00000385231 88 ntBASIC3.44□□□□□ -1.86
SHROOM4Q9ULL8 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
SHROOM4Q9ULL8 RNA5SP201-201ENST00000410316 124 ntBASIC3.44□□□□□ -1.86
SHROOM4Q9ULL8 PCMTD1P1-201ENST00000455560 355 ntBASIC3.44□□□□□ -1.86
SHROOM4Q9ULL8 TOMM22P6-201ENST00000465035 409 ntBASIC3.44□□□□□ -1.86
SHROOM4Q9ULL8 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.44□□□□□ -1.86
SHROOM4Q9ULL8 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC3.44□□□□□ -1.86
SHROOM4Q9ULL8 MIR3672-201ENST00000584290 82 ntBASIC3.44□□□□□ -1.86
SHROOM4Q9ULL8 AP003465.2-201ENST00000602571 373 ntBASIC3.44□□□□□ -1.86
SHROOM4Q9ULL8 AL078605.1-201ENST00000603529 500 ntBASIC3.44□□□□□ -1.86
SHROOM4Q9ULL8 Z98751.3-201ENST00000604447 521 ntBASIC3.44□□□□□ -1.86
SHROOM4Q9ULL8 AC093913.1-201ENST00000614178 329 ntBASIC3.44□□□□□ -1.86
SHROOM4Q9ULL8 AC007014.2-201ENST00000615581 479 ntBASIC3.44□□□□□ -1.86
SHROOM4Q9ULL8 AL450472.1-202ENST00000637286 180 ntBASIC3.44□□□□□ -1.86
SHROOM4Q9ULL8 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC3.44□□□□□ -1.86
SHROOM4Q9ULL8 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
SHROOM4Q9ULL8 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SHROOM4Q9ULL8 RNU6-790P-201ENST00000384479 105 ntBASIC3.43□□□□□ -1.86
SHROOM4Q9ULL8 MIR521-1-201ENST00000384902 87 ntBASIC3.43□□□□□ -1.86
SHROOM4Q9ULL8 MIR1277-201ENST00000408536 78 ntBASIC3.43□□□□□ -1.86
SHROOM4Q9ULL8 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.43□□□□□ -1.86
SHROOM4Q9ULL8 WARS2P1-201ENST00000429678 537 ntBASIC3.43□□□□□ -1.86
SHROOM4Q9ULL8 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.43□□□□□ -1.86
SHROOM4Q9ULL8 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.43□□□□□ -1.86
SHROOM4Q9ULL8 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.43□□□□□ -1.86
SHROOM4Q9ULL8 PTP4A1P4-201ENST00000512479 322 ntBASIC3.43□□□□□ -1.86
SHROOM4Q9ULL8 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.43□□□□□ -1.86
SHROOM4Q9ULL8 RPL17P51-201ENST00000605218 238 ntBASIC3.43□□□□□ -1.86
SHROOM4Q9ULL8 AL512598.1-201ENST00000610158 273 ntBASIC3.43□□□□□ -1.86
SHROOM4Q9ULL8 RMST_2.1-201ENST00000617263 136 ntBASIC3.43□□□□□ -1.86
SHROOM4Q9ULL8 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.43□□□□□ -1.86
SHROOM4Q9ULL8 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.43□□□□□ -1.86
SHROOM4Q9ULL8 SNORD32B-201ENST00000364460 84 ntBASIC3.42□□□□□ -1.86
SHROOM4Q9ULL8 SNORA46.1-201ENST00000391069 153 ntBASIC3.42□□□□□ -1.86
SHROOM4Q9ULL8 HMGN2P39-201ENST00000398005 273 ntBASIC3.42□□□□□ -1.86
SHROOM4Q9ULL8 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC3.42□□□□□ -1.86
SHROOM4Q9ULL8 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.42□□□□□ -1.86
SHROOM4Q9ULL8 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.42□□□□□ -1.86
SHROOM4Q9ULL8 BX248123.2-201ENST00000606318 124 ntBASIC3.42□□□□□ -1.86
SHROOM4Q9ULL8 AC005520.5-201ENST00000613926 164 ntBASIC3.42□□□□□ -1.86
SHROOM4Q9ULL8 MIR1248-201ENST00000629190 106 ntBASIC3.42□□□□□ -1.86
SHROOM4Q9ULL8 AP000553.5-201ENST00000641933 54 ntBASIC3.42□□□□□ -1.86
SHROOM4Q9ULL8 SNORA6-201ENST00000384033 151 ntBASIC3.41□□□□□ -1.86
SHROOM4Q9ULL8 RNU6-378P-201ENST00000384324 107 ntBASIC3.41□□□□□ -1.86
SHROOM4Q9ULL8 SNORA12-201ENST00000391162 147 ntBASIC3.41□□□□□ -1.86
SHROOM4Q9ULL8 AL357139.1-201ENST00000407792 426 ntBASIC3.41□□□□□ -1.86
SHROOM4Q9ULL8 AC082651.2-201ENST00000496833 166 ntBASIC3.41□□□□□ -1.86
SHROOM4Q9ULL8 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.41□□□□□ -1.86
SHROOM4Q9ULL8 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC3.41□□□□□ -1.86
SHROOM4Q9ULL8 AL138726.1-201ENST00000614873 333 ntBASIC3.41□□□□□ -1.86
SHROOM4Q9ULL8 AC100810.6-201ENST00000638068 285 ntBASIC3.41□□□□□ -1.86
SHROOM4Q9ULL8 AC233981.2-201ENST00000611524 1614 ntBASIC3.41□□□□□ -1.86
SHROOM4Q9ULL8 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
SHROOM4Q9ULL8 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
SHROOM4Q9ULL8 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC3.41□□□□□ -1.86
SHROOM4Q9ULL8 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.41□□□□□ -1.86
SHROOM4Q9ULL8 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.41□□□□□ -1.86
SHROOM4Q9ULL8 CBX3P4-201ENST00000538909 354 ntBASIC3.41□□□□□ -1.86
SHROOM4Q9ULL8 MYL12BP1-201ENST00000569826 507 ntBASIC3.41□□□□□ -1.86
SHROOM4Q9ULL8 AC007229.1-201ENST00000590455 412 ntBASIC3.41□□□□□ -1.86
SHROOM4Q9ULL8 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SHROOM4Q9ULL8 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SHROOM4Q9ULL8 AL359314.1-201ENST00000616913 261 ntBASIC3.41□□□□□ -1.86
SHROOM4Q9ULL8 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.4□□□□□ -1.86
SHROOM4Q9ULL8 MTND5P35-201ENST00000557537 1720 ntBASIC3.4□□□□□ -1.87
SHROOM4Q9ULL8 RNU6-562P-201ENST00000362731 107 ntBASIC3.4□□□□□ -1.87
SHROOM4Q9ULL8 Y_RNA.123-201ENST00000363338 102 ntBASIC3.4□□□□□ -1.87
SHROOM4Q9ULL8 SNORD116-11-201ENST00000383882 92 ntBASIC3.4□□□□□ -1.87
SHROOM4Q9ULL8 USP9YP28-201ENST00000435142 589 ntBASIC3.4□□□□□ -1.87
SHROOM4Q9ULL8 MTCO3P18-201ENST00000440206 761 ntBASIC3.4□□□□□ -1.87
SHROOM4Q9ULL8 AC093259.1-201ENST00000509755 300 ntBASIC3.4□□□□□ -1.87
SHROOM4Q9ULL8 RNU2-19P-201ENST00000517288 84 ntBASIC3.4□□□□□ -1.87
SHROOM4Q9ULL8 AL133215.3-201ENST00000609801 448 ntBASIC3.4□□□□□ -1.87
SHROOM4Q9ULL8 MIR6895-201ENST00000613497 78 ntBASIC3.4□□□□□ -1.87
SHROOM4Q9ULL8 AC090617.10-201ENST00000624308 134 ntBASIC3.4□□□□□ -1.87
SHROOM4Q9ULL8 SNORA43.4-201ENST00000629559 138 ntBASIC3.4□□□□□ -1.87
SHROOM4Q9ULL8 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
SHROOM4Q9ULL8 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.39□□□□□ -1.87
SHROOM4Q9ULL8 RPS29P25-201ENST00000481709 171 ntBASIC3.39□□□□□ -1.87
SHROOM4Q9ULL8 AC021146.2-201ENST00000504736 556 ntBASIC3.39□□□□□ -1.87
SHROOM4Q9ULL8 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC3.39□□□□□ -1.87
SHROOM4Q9ULL8 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
SHROOM4Q9ULL8 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms