Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 MIR1827-201ENST00000408549 66 ntBASIC-0.62□□□□□ -2.51
SCN11AQ9UI33 MTND5P13-201ENST00000513046 1079 ntBASIC-0.62□□□□□ -2.51
SCN11AQ9UI33 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.62□□□□□ -2.51
SCN11AQ9UI33 AK6P2-201ENST00000549020 471 ntBASIC-0.62□□□□□ -2.51
SCN11AQ9UI33 AC004832.4-201ENST00000608952 331 ntBASIC-0.62□□□□□ -2.51
SCN11AQ9UI33 AL391903.3-201ENST00000612158 163 ntBASIC-0.62□□□□□ -2.51
SCN11AQ9UI33 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC-0.62□□□□□ -2.51
SCN11AQ9UI33 U6.101-201ENST00000637707 76 ntBASIC-0.62□□□□□ -2.51
SCN11AQ9UI33 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.63□□□□□ -2.51
SCN11AQ9UI33 SNORD115-24-201ENST00000363528 82 ntBASIC-0.63□□□□□ -2.51
SCN11AQ9UI33 Y_RNA.256-201ENST00000364594 104 ntBASIC-0.63□□□□□ -2.51
SCN11AQ9UI33 MIR196A2-201ENST00000385189 110 ntBASIC-0.63□□□□□ -2.51
SCN11AQ9UI33 BTF3L4P3-201ENST00000418879 476 ntBASIC-0.63□□□□□ -2.51
SCN11AQ9UI33 AL356583.2-201ENST00000426536 280 ntBASIC-0.63□□□□□ -2.51
SCN11AQ9UI33 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC-0.63□□□□□ -2.51
SCN11AQ9UI33 MTCO2P7-201ENST00000446518 666 ntBASIC-0.63□□□□□ -2.51
SCN11AQ9UI33 LAMTOR3P2-201ENST00000504479 232 ntBASIC-0.63□□□□□ -2.51
SCN11AQ9UI33 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.63□□□□□ -2.51
SCN11AQ9UI33 RNU1-117P-201ENST00000517041 158 ntBASIC-0.63□□□□□ -2.51
SCN11AQ9UI33 LRRC6P1-201ENST00000532188 885 ntBASIC-0.63□□□□□ -2.51
SCN11AQ9UI33 AC095057.3-201ENST00000567102 1157 ntBASIC-0.63□□□□□ -2.51
SCN11AQ9UI33 AL162424.1-201ENST00000602325 221 ntBASIC-0.63□□□□□ -2.51
SCN11AQ9UI33 CTHRC1P1-201ENST00000605383 469 ntBASIC-0.63□□□□□ -2.51
SCN11AQ9UI33 AC106754.2-201ENST00000623006 233 ntBASIC-0.63□□□□□ -2.51
SCN11AQ9UI33 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC-0.63□□□□□ -2.51
SCN11AQ9UI33 RNU4-46P-201ENST00000410818 138 ntBASIC-0.64□□□□□ -2.51
SCN11AQ9UI33 MTCO2P8-201ENST00000412213 658 ntBASIC-0.64□□□□□ -2.51
SCN11AQ9UI33 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC-0.64□□□□□ -2.51
SCN11AQ9UI33 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC-0.64□□□□□ -2.51
SCN11AQ9UI33 AC020550.1-201ENST00000447385 163 ntBASIC-0.64□□□□□ -2.51
SCN11AQ9UI33 NDUFA5P7-201ENST00000452914 242 ntBASIC-0.64□□□□□ -2.51
SCN11AQ9UI33 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC-0.64□□□□□ -2.51
SCN11AQ9UI33 SNORD126-201ENST00000459475 77 ntBASIC-0.64□□□□□ -2.51
SCN11AQ9UI33 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC-0.64□□□□□ -2.51
SCN11AQ9UI33 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC-0.64□□□□□ -2.51
SCN11AQ9UI33 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC-0.64□□□□□ -2.51
SCN11AQ9UI33 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC-0.64□□□□□ -2.51
SCN11AQ9UI33 AC021231.3-201ENST00000558497 370 ntBASIC-0.64□□□□□ -2.51
SCN11AQ9UI33 MIR5697-201ENST00000578045 78 ntBASIC-0.64□□□□□ -2.51
SCN11AQ9UI33 AL929325.1-201ENST00000603096 117 ntBASIC-0.64□□□□□ -2.51
SCN11AQ9UI33 AC093788.1-201ENST00000609356 927 ntBASIC-0.64□□□□□ -2.51
SCN11AQ9UI33 PCGEM1.1-201ENST00000613431 131 ntBASIC-0.64□□□□□ -2.51
SCN11AQ9UI33 AL513423.1-201ENST00000621695 132 ntBASIC-0.64□□□□□ -2.51
SCN11AQ9UI33 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC-0.64□□□□□ -2.51
SCN11AQ9UI33 RNU6-199P-201ENST00000362954 107 ntBASIC-0.65□□□□□ -2.51
SCN11AQ9UI33 SMIM11P1-201ENST00000369586 178 ntBASIC-0.65□□□□□ -2.51
SCN11AQ9UI33 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.65□□□□□ -2.51
SCN11AQ9UI33 AL590084.2-201ENST00000401481 382 ntBASIC-0.65□□□□□ -2.51
SCN11AQ9UI33 AL603865.2-201ENST00000401679 213 ntBASIC-0.65□□□□□ -2.51
SCN11AQ9UI33 RNU6-564P-201ENST00000410983 104 ntBASIC-0.65□□□□□ -2.51
SCN11AQ9UI33 HMGN2P26-201ENST00000463169 339 ntBASIC-0.65□□□□□ -2.51
SCN11AQ9UI33 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC-0.65□□□□□ -2.51
SCN11AQ9UI33 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.65□□□□□ -2.51
SCN11AQ9UI33 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.65□□□□□ -2.51
SCN11AQ9UI33 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC-0.65□□□□□ -2.51
SCN11AQ9UI33 AC007014.2-201ENST00000615581 479 ntBASIC-0.65□□□□□ -2.51
SCN11AQ9UI33 MTND4P4-201ENST00000439033 1366 ntBASIC-0.65□□□□□ -2.51
SCN11AQ9UI33 RNU6-1031P-201ENST00000384773 107 ntBASIC-0.65□□□□□ -2.51
SCN11AQ9UI33 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC-0.65□□□□□ -2.51
SCN11AQ9UI33 RNU2-46P-201ENST00000517038 113 ntBASIC-0.65□□□□□ -2.51
SCN11AQ9UI33 AC091163.3-201ENST00000518269 1144 ntBASIC-0.65□□□□□ -2.51
SCN11AQ9UI33 AP003716.2-201ENST00000528260 108 ntBASIC-0.65□□□□□ -2.51
SCN11AQ9UI33 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC-0.65□□□□□ -2.51
SCN11AQ9UI33 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC-0.65□□□□□ -2.51
SCN11AQ9UI33 AL161798.1-201ENST00000604630 131 ntBASIC-0.65□□□□□ -2.51
SCN11AQ9UI33 AC242628.1-201ENST00000606810 391 ntBASIC-0.65□□□□□ -2.51
SCN11AQ9UI33 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC-0.65□□□□□ -2.51
SCN11AQ9UI33 MIR548AZ-201ENST00000616567 95 ntBASIC-0.65□□□□□ -2.51
SCN11AQ9UI33 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC-0.66□□□□□ -2.52
SCN11AQ9UI33 RNA5SP118-201ENST00000410385 109 ntBASIC-0.66□□□□□ -2.52
SCN11AQ9UI33 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC-0.66□□□□□ -2.52
SCN11AQ9UI33 MTATP6P23-201ENST00000440153 476 ntBASIC-0.66□□□□□ -2.52
SCN11AQ9UI33 AC091860.1-201ENST00000505723 432 ntBASIC-0.66□□□□□ -2.52
SCN11AQ9UI33 AC013828.2-201ENST00000532487 235 ntBASIC-0.66□□□□□ -2.52
SCN11AQ9UI33 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC-0.66□□□□□ -2.52
SCN11AQ9UI33 AC078795.2-201ENST00000602835 1252 ntBASIC-0.66□□□□□ -2.52
SCN11AQ9UI33 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC-0.66□□□□□ -2.52
SCN11AQ9UI33 MTND5P32-201ENST00000560711 1802 ntBASIC-0.66□□□□□ -2.52
SCN11AQ9UI33 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.67□□□□□ -2.52
SCN11AQ9UI33 RNU4-76P-201ENST00000364509 141 ntBASIC-0.67□□□□□ -2.52
SCN11AQ9UI33 SNORA2.2-201ENST00000365473 135 ntBASIC-0.67□□□□□ -2.52
SCN11AQ9UI33 TMSB4XP8-201ENST00000402089 135 ntBASIC-0.67□□□□□ -2.52
SCN11AQ9UI33 RPS20P2-201ENST00000402520 389 ntBASIC-0.67□□□□□ -2.52
SCN11AQ9UI33 TMSB4XP6-201ENST00000415187 135 ntBASIC-0.67□□□□□ -2.52
SCN11AQ9UI33 TMSB4XP1-201ENST00000424567 135 ntBASIC-0.67□□□□□ -2.52
SCN11AQ9UI33 RNU7-34P-201ENST00000459394 64 ntBASIC-0.67□□□□□ -2.52
SCN11AQ9UI33 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC-0.67□□□□□ -2.52
SCN11AQ9UI33 RNU6-138P-201ENST00000515952 107 ntBASIC-0.67□□□□□ -2.52
SCN11AQ9UI33 DEFB131D-201ENST00000526803 184 ntBASIC-0.67□□□□□ -2.52
SCN11AQ9UI33 DEFB131C-201ENST00000528817 165 ntBASIC-0.67□□□□□ -2.52
SCN11AQ9UI33 AL121992.2-201ENST00000606262 256 ntBASIC-0.67□□□□□ -2.52
SCN11AQ9UI33 AC063943.3-201ENST00000615562 356 ntBASIC-0.67□□□□□ -2.52
SCN11AQ9UI33 AL356596.1-201ENST00000624230 379 ntBASIC-0.67□□□□□ -2.52
SCN11AQ9UI33 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.67□□□□□ -2.52
SCN11AQ9UI33 Y_RNA.100-201ENST00000363141 102 ntBASIC-0.68□□□□□ -2.52
SCN11AQ9UI33 MIR421-201ENST00000365696 85 ntBASIC-0.68□□□□□ -2.52
SCN11AQ9UI33 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC-0.68□□□□□ -2.52
SCN11AQ9UI33 TRIM60P5Y-201ENST00000413946 574 ntBASIC-0.68□□□□□ -2.52
SCN11AQ9UI33 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC-0.68□□□□□ -2.52
SCN11AQ9UI33 GXYLT1P1-201ENST00000446657 490 ntBASIC-0.68□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms