Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 RNA5SP493-201ENST00000364115 91 ntBASIC1.44□□□□□ -2.18
CLCF1Q9UBD9 RNU6-522P-201ENST00000364497 107 ntBASIC1.44□□□□□ -2.18
CLCF1Q9UBD9 AL033519.2-201ENST00000403958 392 ntBASIC1.44□□□□□ -2.18
CLCF1Q9UBD9 RN7SKP101-201ENST00000411376 320 ntBASIC1.44□□□□□ -2.18
CLCF1Q9UBD9 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.44□□□□□ -2.18
CLCF1Q9UBD9 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.44□□□□□ -2.18
CLCF1Q9UBD9 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
CLCF1Q9UBD9 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.44□□□□□ -2.18
CLCF1Q9UBD9 AMD1P1-201ENST00000457220 922 ntBASIC1.44□□□□□ -2.18
CLCF1Q9UBD9 RNU1-131P-201ENST00000458943 161 ntBASIC1.44□□□□□ -2.18
CLCF1Q9UBD9 RNA5SP57-201ENST00000459463 123 ntBASIC1.44□□□□□ -2.18
CLCF1Q9UBD9 AC092436.3-201ENST00000511788 257 ntBASIC1.44□□□□□ -2.18
CLCF1Q9UBD9 RNU6-506P-201ENST00000516553 94 ntBASIC1.44□□□□□ -2.18
CLCF1Q9UBD9 RNU5F-4P-201ENST00000516581 114 ntBASIC1.44□□□□□ -2.18
CLCF1Q9UBD9 Y_RNA.704-201ENST00000516851 102 ntBASIC1.44□□□□□ -2.18
CLCF1Q9UBD9 AC090517.1-201ENST00000569307 266 ntBASIC1.44□□□□□ -2.18
CLCF1Q9UBD9 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.44□□□□□ -2.18
CLCF1Q9UBD9 MIR4303-201ENST00000581299 66 ntBASIC1.44□□□□□ -2.18
CLCF1Q9UBD9 RMST_6.1-201ENST00000611980 203 ntBASIC1.44□□□□□ -2.18
CLCF1Q9UBD9 AC015540.1-201ENST00000615828 501 ntBASIC1.44□□□□□ -2.18
CLCF1Q9UBD9 FER-210ENST00000628534 558 ntTSL 5 BASIC1.44□□□□□ -2.18
CLCF1Q9UBD9 AC099654.12-201ENST00000639868 649 ntBASIC1.44□□□□□ -2.18
CLCF1Q9UBD9 LINC02555-201ENST00000563933 1951 ntBASIC1.44□□□□□ -2.18
CLCF1Q9UBD9 AC006026.1-201ENST00000444025 1803 ntBASIC1.44□□□□□ -2.18
CLCF1Q9UBD9 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
CLCF1Q9UBD9 CBX3P1-201ENST00000325243 554 ntBASIC1.43□□□□□ -2.18
CLCF1Q9UBD9 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
CLCF1Q9UBD9 Y_RNA.372-201ENST00000365599 102 ntBASIC1.43□□□□□ -2.18
CLCF1Q9UBD9 Y_RNA.436-201ENST00000384097 102 ntBASIC1.43□□□□□ -2.18
CLCF1Q9UBD9 RNU6-780P-201ENST00000391030 104 ntBASIC1.43□□□□□ -2.18
CLCF1Q9UBD9 RNU6-1093P-201ENST00000391194 107 ntBASIC1.43□□□□□ -2.18
CLCF1Q9UBD9 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.43□□□□□ -2.18
CLCF1Q9UBD9 MIR450B-201ENST00000401182 78 ntBASIC1.43□□□□□ -2.18
CLCF1Q9UBD9 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.43□□□□□ -2.18
CLCF1Q9UBD9 RNU7-14P-201ENST00000459331 62 ntBASIC1.43□□□□□ -2.18
CLCF1Q9UBD9 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.43□□□□□ -2.18
CLCF1Q9UBD9 AC083904.1-201ENST00000487828 231 ntBASIC1.43□□□□□ -2.18
CLCF1Q9UBD9 RPS23P5-201ENST00000495419 428 ntBASIC1.43□□□□□ -2.18
CLCF1Q9UBD9 MTCO1P29-201ENST00000496868 288 ntBASIC1.43□□□□□ -2.18
CLCF1Q9UBD9 ATP5EP1-201ENST00000510257 156 ntBASIC1.43□□□□□ -2.18
CLCF1Q9UBD9 RNU6-314P-201ENST00000516574 104 ntBASIC1.43□□□□□ -2.18
CLCF1Q9UBD9 RNU6-1332P-201ENST00000516666 104 ntBASIC1.43□□□□□ -2.18
CLCF1Q9UBD9 RNU6-1098P-201ENST00000516772 96 ntBASIC1.43□□□□□ -2.18
CLCF1Q9UBD9 MIR3169-201ENST00000578032 83 ntBASIC1.43□□□□□ -2.18
CLCF1Q9UBD9 AC010525.2-201ENST00000590920 195 ntBASIC1.43□□□□□ -2.18
CLCF1Q9UBD9 AC097065.2-201ENST00000608159 533 ntBASIC1.43□□□□□ -2.18
CLCF1Q9UBD9 AL590240.4-201ENST00000616908 390 ntBASIC1.43□□□□□ -2.18
CLCF1Q9UBD9 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.43□□□□□ -2.18
CLCF1Q9UBD9 MIR1321-201ENST00000637766 79 ntBASIC1.43□□□□□ -2.18
CLCF1Q9UBD9 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
CLCF1Q9UBD9 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
CLCF1Q9UBD9 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.42□□□□□ -2.18
CLCF1Q9UBD9 RNU6-623P-201ENST00000363143 105 ntBASIC1.42□□□□□ -2.18
CLCF1Q9UBD9 SNORD114-6-201ENST00000364393 72 ntBASIC1.42□□□□□ -2.18
CLCF1Q9UBD9 RNU4-75P-201ENST00000364621 146 ntBASIC1.42□□□□□ -2.18
CLCF1Q9UBD9 SNORD31B-201ENST00000364977 69 ntBASIC1.42□□□□□ -2.18
CLCF1Q9UBD9 RNU6-128P-201ENST00000383976 107 ntBASIC1.42□□□□□ -2.18
CLCF1Q9UBD9 SNORA32.2-201ENST00000384049 122 ntBASIC1.42□□□□□ -2.18
CLCF1Q9UBD9 RNU6-933P-201ENST00000384424 107 ntBASIC1.42□□□□□ -2.18
CLCF1Q9UBD9 RNU6-1026P-201ENST00000384465 108 ntBASIC1.42□□□□□ -2.18
CLCF1Q9UBD9 SNORA48.1-201ENST00000390879 135 ntBASIC1.42□□□□□ -2.18
CLCF1Q9UBD9 AL590002.1-201ENST00000406554 418 ntBASIC1.42□□□□□ -2.18
CLCF1Q9UBD9 RNU6-908P-201ENST00000410160 94 ntBASIC1.42□□□□□ -2.18
CLCF1Q9UBD9 RNU6-325P-201ENST00000411132 105 ntBASIC1.42□□□□□ -2.18
CLCF1Q9UBD9 RPS20P15-201ENST00000412792 311 ntBASIC1.42□□□□□ -2.18
CLCF1Q9UBD9 AC016907.1-201ENST00000419483 435 ntBASIC1.42□□□□□ -2.18
CLCF1Q9UBD9 DLGAP5P1-201ENST00000430307 464 ntBASIC1.42□□□□□ -2.18
CLCF1Q9UBD9 NDUFA5P4-201ENST00000436704 385 ntBASIC1.42□□□□□ -2.18
CLCF1Q9UBD9 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.42□□□□□ -2.18
CLCF1Q9UBD9 SNRPEP8-201ENST00000442866 260 ntBASIC1.42□□□□□ -2.18
CLCF1Q9UBD9 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.42□□□□□ -2.18
CLCF1Q9UBD9 RN7SKP210-201ENST00000459176 261 ntBASIC1.42□□□□□ -2.18
CLCF1Q9UBD9 AC026371.1-201ENST00000551867 419 ntBASIC1.42□□□□□ -2.18
CLCF1Q9UBD9 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.42□□□□□ -2.18
CLCF1Q9UBD9 MIR4713-201ENST00000582691 75 ntBASIC1.42□□□□□ -2.18
CLCF1Q9UBD9 AC005786.1-201ENST00000588553 154 ntBASIC1.42□□□□□ -2.18
CLCF1Q9UBD9 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.42□□□□□ -2.18
CLCF1Q9UBD9 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.42□□□□□ -2.18
CLCF1Q9UBD9 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.42□□□□□ -2.18
CLCF1Q9UBD9 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
CLCF1Q9UBD9 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.41□□□□□ -2.18
CLCF1Q9UBD9 RNU1-76P-201ENST00000362903 159 ntBASIC1.41□□□□□ -2.18
CLCF1Q9UBD9 Y_RNA.123-201ENST00000363338 102 ntBASIC1.41□□□□□ -2.18
CLCF1Q9UBD9 RNU6-254P-201ENST00000363377 107 ntBASIC1.41□□□□□ -2.18
CLCF1Q9UBD9 Y_RNA.373-201ENST00000365600 103 ntBASIC1.41□□□□□ -2.18
CLCF1Q9UBD9 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.41□□□□□ -2.18
CLCF1Q9UBD9 RNU6-1286P-201ENST00000383871 107 ntBASIC1.41□□□□□ -2.18
CLCF1Q9UBD9 SNORA29-201ENST00000384183 140 ntBASIC1.41□□□□□ -2.18
CLCF1Q9UBD9 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
CLCF1Q9UBD9 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
CLCF1Q9UBD9 RNU4-62P-201ENST00000410125 130 ntBASIC1.41□□□□□ -2.18
CLCF1Q9UBD9 RNA5SP494-201ENST00000410653 129 ntBASIC1.41□□□□□ -2.18
CLCF1Q9UBD9 MTCO1P20-201ENST00000425366 358 ntBASIC1.41□□□□□ -2.18
CLCF1Q9UBD9 TOMM22P6-201ENST00000465035 409 ntBASIC1.41□□□□□ -2.18
CLCF1Q9UBD9 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.41□□□□□ -2.18
CLCF1Q9UBD9 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
CLCF1Q9UBD9 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.41□□□□□ -2.18
CLCF1Q9UBD9 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.41□□□□□ -2.18
CLCF1Q9UBD9 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.41□□□□□ -2.18
CLCF1Q9UBD9 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 166.9 ms