Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.95□□□□□ -1.78
CNTN3Q9P232 SNORD9-201ENST00000362566 104 ntBASIC3.95□□□□□ -1.78
CNTN3Q9P232 RNU6-801P-201ENST00000364087 105 ntBASIC3.95□□□□□ -1.78
CNTN3Q9P232 RNU6-417P-201ENST00000384712 107 ntBASIC3.95□□□□□ -1.78
CNTN3Q9P232 RNU6-750P-201ENST00000390946 107 ntBASIC3.95□□□□□ -1.78
CNTN3Q9P232 RNU6-239P-201ENST00000390990 99 ntBASIC3.95□□□□□ -1.78
CNTN3Q9P232 AL365496.1-201ENST00000426885 215 ntBASIC3.95□□□□□ -1.78
CNTN3Q9P232 CYCSP4-201ENST00000429682 331 ntBASIC3.95□□□□□ -1.78
CNTN3Q9P232 Z75741.1-201ENST00000446793 314 ntBASIC3.95□□□□□ -1.78
CNTN3Q9P232 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC3.95□□□□□ -1.78
CNTN3Q9P232 U8.19-201ENST00000459095 133 ntBASIC3.95□□□□□ -1.78
CNTN3Q9P232 RPL23AP70-201ENST00000483361 460 ntBASIC3.95□□□□□ -1.78
CNTN3Q9P232 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.95□□□□□ -1.78
CNTN3Q9P232 MIR5006-201ENST00000583027 110 ntBASIC3.95□□□□□ -1.78
CNTN3Q9P232 AC069200.1-201ENST00000609511 323 ntBASIC3.95□□□□□ -1.78
CNTN3Q9P232 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.95□□□□□ -1.78
CNTN3Q9P232 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CNTN3Q9P232 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
CNTN3Q9P232 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CNTN3Q9P232 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.95□□□□□ -1.78
CNTN3Q9P232 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CNTN3Q9P232 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CNTN3Q9P232 AC026241.1-201ENST00000517873 2142 ntBASIC3.94□□□□□ -1.78
CNTN3Q9P232 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
CNTN3Q9P232 RNU1-75P-201ENST00000347264 129 ntBASIC3.94□□□□□ -1.78
CNTN3Q9P232 RNU6-1210P-201ENST00000363775 107 ntBASIC3.94□□□□□ -1.78
CNTN3Q9P232 SNORD115-30-201ENST00000364117 82 ntBASIC3.94□□□□□ -1.78
CNTN3Q9P232 Y_RNA.243-201ENST00000364481 109 ntBASIC3.94□□□□□ -1.78
CNTN3Q9P232 SNORA14A-201ENST00000364773 135 ntBASIC3.94□□□□□ -1.78
CNTN3Q9P232 Y_RNA.287-201ENST00000364853 94 ntBASIC3.94□□□□□ -1.78
CNTN3Q9P232 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.94□□□□□ -1.78
CNTN3Q9P232 RNU6-131P-201ENST00000391144 107 ntBASIC3.94□□□□□ -1.78
CNTN3Q9P232 RNU6-381P-201ENST00000391259 108 ntBASIC3.94□□□□□ -1.78
CNTN3Q9P232 AL031003.1-201ENST00000404229 172 ntBASIC3.94□□□□□ -1.78
CNTN3Q9P232 NDUFB1P1-201ENST00000435191 180 ntBASIC3.94□□□□□ -1.78
CNTN3Q9P232 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.94□□□□□ -1.78
CNTN3Q9P232 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.94□□□□□ -1.78
CNTN3Q9P232 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC3.94□□□□□ -1.78
CNTN3Q9P232 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.94□□□□□ -1.78
CNTN3Q9P232 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.94□□□□□ -1.78
CNTN3Q9P232 RPL17P51-201ENST00000605218 238 ntBASIC3.94□□□□□ -1.78
CNTN3Q9P232 MIR8058-201ENST00000615737 89 ntBASIC3.94□□□□□ -1.78
CNTN3Q9P232 AL391261.4-201ENST00000616012 481 ntBASIC3.94□□□□□ -1.78
CNTN3Q9P232 AC013791.1-201ENST00000616619 62 ntBASIC3.94□□□□□ -1.78
CNTN3Q9P232 Y_RNA.778-201ENST00000620203 90 ntBASIC3.94□□□□□ -1.78
CNTN3Q9P232 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.94□□□□□ -1.78
CNTN3Q9P232 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.94□□□□□ -1.78
CNTN3Q9P232 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.94□□□□□ -1.78
CNTN3Q9P232 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CNTN3Q9P232 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CNTN3Q9P232 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CNTN3Q9P232 AC010329.5-201ENST00000623497 2174 ntBASIC3.93□□□□□ -1.78
CNTN3Q9P232 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CNTN3Q9P232 MFSD8-236ENST00000641509 4050 ntBASIC3.93□□□□□ -1.78
CNTN3Q9P232 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.93□□□□□ -1.78
CNTN3Q9P232 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.93□□□□□ -1.78
CNTN3Q9P232 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CNTN3Q9P232 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CNTN3Q9P232 RNU6-655P-201ENST00000362858 107 ntBASIC3.93□□□□□ -1.78
CNTN3Q9P232 RNU2-49P-201ENST00000410666 184 ntBASIC3.93□□□□□ -1.78
CNTN3Q9P232 RPS29P4-201ENST00000414733 161 ntBASIC3.93□□□□□ -1.78
CNTN3Q9P232 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.93□□□□□ -1.78
CNTN3Q9P232 HMGN2P31-201ENST00000432430 273 ntBASIC3.93□□□□□ -1.78
CNTN3Q9P232 AC145146.1-201ENST00000496370 254 ntBASIC3.93□□□□□ -1.78
CNTN3Q9P232 RNU2-44P-201ENST00000516795 194 ntBASIC3.93□□□□□ -1.78
CNTN3Q9P232 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.93□□□□□ -1.78
CNTN3Q9P232 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.93□□□□□ -1.78
CNTN3Q9P232 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.93□□□□□ -1.78
CNTN3Q9P232 AL391813.1-201ENST00000603098 260 ntBASIC3.93□□□□□ -1.78
CNTN3Q9P232 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
CNTN3Q9P232 AL353746.1-201ENST00000566293 6881 ntBASIC3.93□□□□□ -1.78
CNTN3Q9P232 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CNTN3Q9P232 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CNTN3Q9P232 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CNTN3Q9P232 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
CNTN3Q9P232 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CNTN3Q9P232 U3.8-201ENST00000363675 217 ntBASIC3.92□□□□□ -1.78
CNTN3Q9P232 RNA5SP139-201ENST00000364340 117 ntBASIC3.92□□□□□ -1.78
CNTN3Q9P232 SNORD87-201ENST00000364849 89 ntBASIC3.92□□□□□ -1.78
CNTN3Q9P232 SNORA8.3-201ENST00000384679 139 ntBASIC3.92□□□□□ -1.78
CNTN3Q9P232 MIR186-201ENST00000384988 86 ntBASIC3.92□□□□□ -1.78
CNTN3Q9P232 RNU1-101P-201ENST00000391171 127 ntBASIC3.92□□□□□ -1.78
CNTN3Q9P232 AC004866.1-201ENST00000411748 78 ntBASIC3.92□□□□□ -1.78
CNTN3Q9P232 CR769767.1-201ENST00000436337 346 ntBASIC3.92□□□□□ -1.78
CNTN3Q9P232 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.92□□□□□ -1.78
CNTN3Q9P232 RNU6-313P-201ENST00000516317 112 ntBASIC3.92□□□□□ -1.78
CNTN3Q9P232 RNU7-121P-201ENST00000516604 62 ntBASIC3.92□□□□□ -1.78
CNTN3Q9P232 AC021269.2-201ENST00000532318 330 ntBASIC3.92□□□□□ -1.78
CNTN3Q9P232 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.92□□□□□ -1.78
CNTN3Q9P232 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.92□□□□□ -1.78
CNTN3Q9P232 MIR4431-201ENST00000579990 94 ntBASIC3.92□□□□□ -1.78
CNTN3Q9P232 MIR4744-201ENST00000581563 82 ntBASIC3.92□□□□□ -1.78
CNTN3Q9P232 MIR3922-201ENST00000585192 84 ntBASIC3.92□□□□□ -1.78
CNTN3Q9P232 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CNTN3Q9P232 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CNTN3Q9P232 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.92□□□□□ -1.78
CNTN3Q9P232 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.92□□□□□ -1.78
CNTN3Q9P232 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.92□□□□□ -1.78
CNTN3Q9P232 MAPK10-373ENST00000641983 6772 ntBASIC3.92□□□□□ -1.78
CNTN3Q9P232 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 171.3 ms