Protein–RNA interactions for Protein: Q9NZU5

LMCD1, LIM and cysteine-rich domains protein 1, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1Q9NZU5 Y_RNA.542-201ENST00000384641 111 ntBASIC3.82□□□□□ -1.8
LMCD1Q9NZU5 RNU2-2P-201ENST00000410396 191 ntBASIC3.82□□□□□ -1.8
LMCD1Q9NZU5 AC006028.1-201ENST00000438379 402 ntBASIC3.82□□□□□ -1.8
LMCD1Q9NZU5 GPM6BP3-201ENST00000442797 145 ntBASIC3.82□□□□□ -1.8
LMCD1Q9NZU5 AC009237.8-201ENST00000445492 379 ntBASIC3.82□□□□□ -1.8
LMCD1Q9NZU5 AC005042.3-201ENST00000453230 174 ntBASIC3.82□□□□□ -1.8
LMCD1Q9NZU5 snoU13.6-201ENST00000458785 104 ntBASIC3.82□□□□□ -1.8
LMCD1Q9NZU5 AC078918.1-201ENST00000498515 228 ntBASIC3.82□□□□□ -1.8
LMCD1Q9NZU5 RNU6-168P-201ENST00000516189 101 ntBASIC3.82□□□□□ -1.8
LMCD1Q9NZU5 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.82□□□□□ -1.8
LMCD1Q9NZU5 HSPE1P4-201ENST00000550617 308 ntBASIC3.82□□□□□ -1.8
LMCD1Q9NZU5 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.82□□□□□ -1.8
LMCD1Q9NZU5 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.82□□□□□ -1.8
LMCD1Q9NZU5 AL138963.2-201ENST00000605137 226 ntBASIC3.82□□□□□ -1.8
LMCD1Q9NZU5 AC022441.3-201ENST00000605737 136 ntBASIC3.82□□□□□ -1.8
LMCD1Q9NZU5 RNU2-4P-201ENST00000606190 192 ntBASIC3.82□□□□□ -1.8
LMCD1Q9NZU5 U2.15-201ENST00000611544 191 ntBASIC3.82□□□□□ -1.8
LMCD1Q9NZU5 U2.16-201ENST00000613119 191 ntBASIC3.82□□□□□ -1.8
LMCD1Q9NZU5 U2.12-201ENST00000613778 191 ntBASIC3.82□□□□□ -1.8
LMCD1Q9NZU5 U2.9-201ENST00000615427 191 ntBASIC3.82□□□□□ -1.8
LMCD1Q9NZU5 U2.11-201ENST00000616345 191 ntBASIC3.82□□□□□ -1.8
LMCD1Q9NZU5 U2.2-201ENST00000616535 191 ntBASIC3.82□□□□□ -1.8
LMCD1Q9NZU5 U2.3-201ENST00000617785 191 ntBASIC3.82□□□□□ -1.8
LMCD1Q9NZU5 U2.19-201ENST00000618602 191 ntBASIC3.82□□□□□ -1.8
LMCD1Q9NZU5 RNU2-1-201ENST00000618664 191 ntBASIC3.82□□□□□ -1.8
LMCD1Q9NZU5 U2.6-201ENST00000619225 191 ntBASIC3.82□□□□□ -1.8
LMCD1Q9NZU5 U2.5-201ENST00000619465 191 ntBASIC3.82□□□□□ -1.8
LMCD1Q9NZU5 U2.10-201ENST00000620268 191 ntBASIC3.82□□□□□ -1.8
LMCD1Q9NZU5 AC048347.1-201ENST00000624621 427 ntBASIC3.82□□□□□ -1.8
LMCD1Q9NZU5 SNORA50A-202ENST00000629536 136 ntBASIC3.82□□□□□ -1.8
LMCD1Q9NZU5 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
LMCD1Q9NZU5 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
LMCD1Q9NZU5 SRP72P2-201ENST00000344851 1979 ntBASIC3.82□□□□□ -1.8
LMCD1Q9NZU5 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.81□□□□□ -1.8
LMCD1Q9NZU5 AC006504.1-201ENST00000562493 3666 ntBASIC3.81□□□□□ -1.8
LMCD1Q9NZU5 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
LMCD1Q9NZU5 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
LMCD1Q9NZU5 Y_RNA.420-201ENST00000384043 110 ntBASIC3.81□□□□□ -1.8
LMCD1Q9NZU5 RNU6-140P-201ENST00000384566 108 ntBASIC3.81□□□□□ -1.8
LMCD1Q9NZU5 MIR544A-201ENST00000384855 91 ntBASIC3.81□□□□□ -1.8
LMCD1Q9NZU5 MIR518D-201ENST00000385014 87 ntBASIC3.81□□□□□ -1.8
LMCD1Q9NZU5 SNORD17-201ENST00000390930 237 ntBASIC3.81□□□□□ -1.8
LMCD1Q9NZU5 Y_RNA.595-201ENST00000410403 105 ntBASIC3.81□□□□□ -1.8
LMCD1Q9NZU5 RN7SKP284-201ENST00000411002 343 ntBASIC3.81□□□□□ -1.8
LMCD1Q9NZU5 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC3.81□□□□□ -1.8
LMCD1Q9NZU5 COTL1P1-201ENST00000422309 375 ntBASIC3.81□□□□□ -1.8
LMCD1Q9NZU5 RPL21P66-201ENST00000426566 466 ntBASIC3.81□□□□□ -1.8
LMCD1Q9NZU5 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.81□□□□□ -1.8
LMCD1Q9NZU5 EEF1B2P7-201ENST00000451177 676 ntBASIC3.81□□□□□ -1.8
LMCD1Q9NZU5 AC025518.1-201ENST00000479856 347 ntBASIC3.81□□□□□ -1.8
LMCD1Q9NZU5 AC078817.1-201ENST00000492623 435 ntBASIC3.81□□□□□ -1.8
LMCD1Q9NZU5 RNU6-191P-201ENST00000516295 94 ntBASIC3.81□□□□□ -1.8
LMCD1Q9NZU5 RNU6-703P-201ENST00000516946 107 ntBASIC3.81□□□□□ -1.8
LMCD1Q9NZU5 AC099778.2-201ENST00000610904 211 ntBASIC3.81□□□□□ -1.8
LMCD1Q9NZU5 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.81□□□□□ -1.8
LMCD1Q9NZU5 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.81□□□□□ -1.8
LMCD1Q9NZU5 CEP170P1-201ENST00000502249 4587 ntBASIC3.81□□□□□ -1.8
LMCD1Q9NZU5 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.8□□□□□ -1.8
LMCD1Q9NZU5 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LMCD1Q9NZU5 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LMCD1Q9NZU5 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
LMCD1Q9NZU5 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.8□□□□□ -1.8
LMCD1Q9NZU5 RNU6-1144P-201ENST00000384247 104 ntBASIC3.8□□□□□ -1.8
LMCD1Q9NZU5 Y_RNA.525-201ENST00000384570 113 ntBASIC3.8□□□□□ -1.8
LMCD1Q9NZU5 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.8□□□□□ -1.8
LMCD1Q9NZU5 AC008011.1-201ENST00000545989 227 ntBASIC3.8□□□□□ -1.8
LMCD1Q9NZU5 MIR3658-201ENST00000636291 56 ntBASIC3.8□□□□□ -1.8
LMCD1Q9NZU5 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.8□□□□□ -1.8
LMCD1Q9NZU5 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.8□□□□□ -1.8
LMCD1Q9NZU5 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LMCD1Q9NZU5 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.8□□□□□ -1.8
LMCD1Q9NZU5 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.8□□□□□ -1.8
LMCD1Q9NZU5 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LMCD1Q9NZU5 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.8□□□□□ -1.8
LMCD1Q9NZU5 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LMCD1Q9NZU5 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
LMCD1Q9NZU5 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.8□□□□□ -1.8
LMCD1Q9NZU5 AC092593.1-201ENST00000515413 1815 ntBASIC3.79□□□□□ -1.8
LMCD1Q9NZU5 AC007496.3-201ENST00000624987 3443 ntBASIC3.79□□□□□ -1.8
LMCD1Q9NZU5 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
LMCD1Q9NZU5 FTLP6-201ENST00000355274 422 ntBASIC3.79□□□□□ -1.8
LMCD1Q9NZU5 Y_RNA.101-201ENST00000363154 102 ntBASIC3.79□□□□□ -1.8
LMCD1Q9NZU5 Y_RNA.121-201ENST00000363309 113 ntBASIC3.79□□□□□ -1.8
LMCD1Q9NZU5 RNU6-873P-201ENST00000363833 107 ntBASIC3.79□□□□□ -1.8
LMCD1Q9NZU5 Y_RNA.182-201ENST00000363880 111 ntBASIC3.79□□□□□ -1.8
LMCD1Q9NZU5 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.79□□□□□ -1.8
LMCD1Q9NZU5 AL358075.3-201ENST00000426289 226 ntBASIC3.79□□□□□ -1.8
LMCD1Q9NZU5 BTF3P11-201ENST00000426582 477 ntBASIC3.79□□□□□ -1.8
LMCD1Q9NZU5 RPL23AP95-201ENST00000426806 265 ntBASIC3.79□□□□□ -1.8
LMCD1Q9NZU5 U3.44-201ENST00000458938 192 ntBASIC3.79□□□□□ -1.8
LMCD1Q9NZU5 RPL31P61-201ENST00000496160 376 ntBASIC3.79□□□□□ -1.8
LMCD1Q9NZU5 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.79□□□□□ -1.8
LMCD1Q9NZU5 RAC1P5-201ENST00000512182 576 ntBASIC3.79□□□□□ -1.8
LMCD1Q9NZU5 Y_RNA.694-201ENST00000516677 117 ntBASIC3.79□□□□□ -1.8
LMCD1Q9NZU5 SNORA70.18-201ENST00000516696 98 ntBASIC3.79□□□□□ -1.8
LMCD1Q9NZU5 RNU6-1198P-201ENST00000516904 67 ntBASIC3.79□□□□□ -1.8
LMCD1Q9NZU5 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.79□□□□□ -1.8
LMCD1Q9NZU5 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.79□□□□□ -1.8
LMCD1Q9NZU5 AC010999.1-201ENST00000611856 324 ntBASIC3.79□□□□□ -1.8
LMCD1Q9NZU5 AP003355.3-201ENST00000623465 114 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms