Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 AC004584.2-201ENST00000570407 410 ntBASIC2.69□□□□□ -1.98
NCKIPSDQ9NZQ3 AC073410.2-201ENST00000603240 332 ntBASIC2.69□□□□□ -1.98
NCKIPSDQ9NZQ3 AL355297.3-201ENST00000604082 446 ntBASIC2.69□□□□□ -1.98
NCKIPSDQ9NZQ3 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.69□□□□□ -1.98
NCKIPSDQ9NZQ3 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.69□□□□□ -1.98
NCKIPSDQ9NZQ3 ZNF72P-201ENST00000425869 1908 ntBASIC2.69□□□□□ -1.98
NCKIPSDQ9NZQ3 OR56A5-201ENST00000340110 738 ntBASIC2.68□□□□□ -1.98
NCKIPSDQ9NZQ3 RNU6-461P-201ENST00000364195 107 ntBASIC2.68□□□□□ -1.98
NCKIPSDQ9NZQ3 RNU6-26P-201ENST00000383985 107 ntBASIC2.68□□□□□ -1.98
NCKIPSDQ9NZQ3 Y_RNA.424-201ENST00000384063 103 ntBASIC2.68□□□□□ -1.98
NCKIPSDQ9NZQ3 RNA5SP492-201ENST00000411330 114 ntBASIC2.68□□□□□ -1.98
NCKIPSDQ9NZQ3 RPL23AP95-201ENST00000426806 265 ntBASIC2.68□□□□□ -1.98
NCKIPSDQ9NZQ3 Z82188.1-201ENST00000436709 154 ntBASIC2.68□□□□□ -1.98
NCKIPSDQ9NZQ3 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.68□□□□□ -1.98
NCKIPSDQ9NZQ3 RPL39P29-201ENST00000447779 157 ntBASIC2.68□□□□□ -1.98
NCKIPSDQ9NZQ3 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.68□□□□□ -1.98
NCKIPSDQ9NZQ3 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.68□□□□□ -1.98
NCKIPSDQ9NZQ3 SNORA40.14-201ENST00000516543 86 ntBASIC2.68□□□□□ -1.98
NCKIPSDQ9NZQ3 RNU6-635P-201ENST00000516651 102 ntBASIC2.68□□□□□ -1.98
NCKIPSDQ9NZQ3 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.68□□□□□ -1.98
NCKIPSDQ9NZQ3 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.68□□□□□ -1.98
NCKIPSDQ9NZQ3 MIR3945-201ENST00000581853 98 ntBASIC2.68□□□□□ -1.98
NCKIPSDQ9NZQ3 MIR3117-201ENST00000584034 78 ntBASIC2.68□□□□□ -1.98
NCKIPSDQ9NZQ3 AL356575.1-201ENST00000603008 283 ntBASIC2.68□□□□□ -1.98
NCKIPSDQ9NZQ3 Z98751.3-201ENST00000604447 521 ntBASIC2.68□□□□□ -1.98
NCKIPSDQ9NZQ3 AC100812.1-201ENST00000607622 580 ntBASIC2.68□□□□□ -1.98
NCKIPSDQ9NZQ3 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.68□□□□□ -1.98
NCKIPSDQ9NZQ3 AC010297.1-201ENST00000623948 149 ntBASIC2.68□□□□□ -1.98
NCKIPSDQ9NZQ3 AC002543.1-201ENST00000299783 1954 ntBASIC2.68□□□□□ -1.98
NCKIPSDQ9NZQ3 Z82195.2-201ENST00000612348 18351 ntBASIC2.68□□□□□ -1.98
NCKIPSDQ9NZQ3 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
NCKIPSDQ9NZQ3 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
NCKIPSDQ9NZQ3 RNU6-1010P-201ENST00000362757 107 ntBASIC2.67□□□□□ -1.98
NCKIPSDQ9NZQ3 RNU6-450P-201ENST00000364654 107 ntBASIC2.67□□□□□ -1.98
NCKIPSDQ9NZQ3 SET-203ENST00000372688 801 ntTSL 2 BASIC2.67□□□□□ -1.98
NCKIPSDQ9NZQ3 RNU6-823P-201ENST00000391042 103 ntBASIC2.67□□□□□ -1.98
NCKIPSDQ9NZQ3 FO393413.1-201ENST00000402892 195 ntBASIC2.67□□□□□ -1.98
NCKIPSDQ9NZQ3 AL358453.1-201ENST00000422522 250 ntBASIC2.67□□□□□ -1.98
NCKIPSDQ9NZQ3 AL513328.1-201ENST00000446460 224 ntBASIC2.67□□□□□ -1.98
NCKIPSDQ9NZQ3 U8.20-201ENST00000459445 131 ntBASIC2.67□□□□□ -1.98
NCKIPSDQ9NZQ3 RPL30P10-201ENST00000488148 337 ntBASIC2.67□□□□□ -1.98
NCKIPSDQ9NZQ3 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.67□□□□□ -1.98
NCKIPSDQ9NZQ3 AC023141.11-201ENST00000508864 202 ntBASIC2.67□□□□□ -1.98
NCKIPSDQ9NZQ3 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.67□□□□□ -1.98
NCKIPSDQ9NZQ3 RNU7-4P-201ENST00000516961 62 ntBASIC2.67□□□□□ -1.98
NCKIPSDQ9NZQ3 HSPE1P20-201ENST00000538133 289 ntBASIC2.67□□□□□ -1.98
NCKIPSDQ9NZQ3 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.67□□□□□ -1.98
NCKIPSDQ9NZQ3 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.67□□□□□ -1.98
NCKIPSDQ9NZQ3 MIR5188-201ENST00000583467 113 ntBASIC2.67□□□□□ -1.98
NCKIPSDQ9NZQ3 AC124312.5-201ENST00000604451 268 ntBASIC2.67□□□□□ -1.98
NCKIPSDQ9NZQ3 AL021879.1-201ENST00000611756 288 ntBASIC2.67□□□□□ -1.98
NCKIPSDQ9NZQ3 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.67□□□□□ -1.98
NCKIPSDQ9NZQ3 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.67□□□□□ -1.98
NCKIPSDQ9NZQ3 AC009541.1-201ENST00000438279 2662 ntBASIC2.67□□□□□ -1.98
NCKIPSDQ9NZQ3 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.67□□□□□ -1.98
NCKIPSDQ9NZQ3 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
NCKIPSDQ9NZQ3 Y_RNA.188-201ENST00000363952 111 ntBASIC2.66□□□□□ -1.98
NCKIPSDQ9NZQ3 SNORD56.5-201ENST00000364281 72 ntBASIC2.66□□□□□ -1.98
NCKIPSDQ9NZQ3 U3.13-201ENST00000364804 214 ntBASIC2.66□□□□□ -1.98
NCKIPSDQ9NZQ3 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
NCKIPSDQ9NZQ3 RNU6-505P-201ENST00000384427 107 ntBASIC2.66□□□□□ -1.98
NCKIPSDQ9NZQ3 RNU1-57P-201ENST00000384491 166 ntBASIC2.66□□□□□ -1.98
NCKIPSDQ9NZQ3 RNU6-1109P-201ENST00000391187 107 ntBASIC2.66□□□□□ -1.98
NCKIPSDQ9NZQ3 RNU2-52P-201ENST00000410680 190 ntBASIC2.66□□□□□ -1.98
NCKIPSDQ9NZQ3 RNU6-847P-201ENST00000411115 108 ntBASIC2.66□□□□□ -1.98
NCKIPSDQ9NZQ3 RPL30P4-201ENST00000429309 333 ntBASIC2.66□□□□□ -1.98
NCKIPSDQ9NZQ3 AC092423.1-201ENST00000430165 186 ntBASIC2.66□□□□□ -1.98
NCKIPSDQ9NZQ3 CBX3P6-201ENST00000430257 527 ntBASIC2.66□□□□□ -1.98
NCKIPSDQ9NZQ3 MICF-203ENST00000432679 129 ntBASIC2.66□□□□□ -1.98
NCKIPSDQ9NZQ3 AC112220.1-201ENST00000434628 355 ntBASIC2.66□□□□□ -1.98
NCKIPSDQ9NZQ3 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.66□□□□□ -1.98
NCKIPSDQ9NZQ3 RPL30P1-201ENST00000488676 339 ntBASIC2.66□□□□□ -1.98
NCKIPSDQ9NZQ3 AC093852.1-201ENST00000503587 266 ntBASIC2.66□□□□□ -1.98
NCKIPSDQ9NZQ3 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.66□□□□□ -1.98
NCKIPSDQ9NZQ3 HSBP1P1-201ENST00000555205 166 ntBASIC2.66□□□□□ -1.98
NCKIPSDQ9NZQ3 MYL12BP1-201ENST00000569826 507 ntBASIC2.66□□□□□ -1.98
NCKIPSDQ9NZQ3 AC010928.2-201ENST00000588017 287 ntBASIC2.66□□□□□ -1.98
NCKIPSDQ9NZQ3 AC069294.1-201ENST00000608397 350 ntBASIC2.66□□□□□ -1.98
NCKIPSDQ9NZQ3 AL450472.1-202ENST00000637286 180 ntBASIC2.66□□□□□ -1.98
NCKIPSDQ9NZQ3 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
NCKIPSDQ9NZQ3 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.66□□□□□ -1.98
NCKIPSDQ9NZQ3 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
NCKIPSDQ9NZQ3 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
NCKIPSDQ9NZQ3 Y_RNA.106-201ENST00000363189 100 ntBASIC2.65□□□□□ -1.99
NCKIPSDQ9NZQ3 SNORA63.7-201ENST00000365579 123 ntBASIC2.65□□□□□ -1.99
NCKIPSDQ9NZQ3 SNORD14.1-201ENST00000365609 90 ntBASIC2.65□□□□□ -1.99
NCKIPSDQ9NZQ3 Y_RNA.476-201ENST00000384347 108 ntBASIC2.65□□□□□ -1.99
NCKIPSDQ9NZQ3 Y_RNA.526-201ENST00000384572 110 ntBASIC2.65□□□□□ -1.99
NCKIPSDQ9NZQ3 RNU6-1222P-201ENST00000384615 107 ntBASIC2.65□□□□□ -1.99
NCKIPSDQ9NZQ3 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
NCKIPSDQ9NZQ3 RNU6-907P-201ENST00000390924 102 ntBASIC2.65□□□□□ -1.99
NCKIPSDQ9NZQ3 SNORA12.2-201ENST00000391040 156 ntBASIC2.65□□□□□ -1.99
NCKIPSDQ9NZQ3 BTF3L4P2-201ENST00000392798 346 ntBASIC2.65□□□□□ -1.99
NCKIPSDQ9NZQ3 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
NCKIPSDQ9NZQ3 MIR1252-201ENST00000408861 65 ntBASIC2.65□□□□□ -1.99
NCKIPSDQ9NZQ3 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.65□□□□□ -1.99
NCKIPSDQ9NZQ3 AC092427.1-202ENST00000430569 476 ntBASIC2.65□□□□□ -1.99
NCKIPSDQ9NZQ3 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.65□□□□□ -1.99
NCKIPSDQ9NZQ3 RNU7-169P-201ENST00000459456 61 ntBASIC2.65□□□□□ -1.99
NCKIPSDQ9NZQ3 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms