Protein–RNA interactions for Protein: Q9NY93

DDX56, Probable ATP-dependent RNA helicase DDX56, humanhuman

Known RBP Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56Q9NY93 BX510359.1-201ENST00000456973 237 ntBASIC2.96□□□□□ -1.94
DDX56Q9NY93 AP000870.1-201ENST00000472927 406 ntBASIC2.96□□□□□ -1.94
DDX56Q9NY93 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.96□□□□□ -1.94
DDX56Q9NY93 RNU6-991P-201ENST00000516168 107 ntBASIC2.96□□□□□ -1.94
DDX56Q9NY93 AC090617.3-201ENST00000573670 475 ntBASIC2.96□□□□□ -1.94
DDX56Q9NY93 AL356055.1-201ENST00000602528 446 ntBASIC2.96□□□□□ -1.94
DDX56Q9NY93 AC107871.2-201ENST00000612894 502 ntBASIC2.96□□□□□ -1.94
DDX56Q9NY93 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.96□□□□□ -1.94
DDX56Q9NY93 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
DDX56Q9NY93 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
DDX56Q9NY93 AC092593.1-201ENST00000515413 1815 ntBASIC2.96□□□□□ -1.94
DDX56Q9NY93 MIR26A1-201ENST00000362205 77 ntBASIC2.95□□□□□ -1.94
DDX56Q9NY93 Y_RNA.31-201ENST00000362574 102 ntBASIC2.95□□□□□ -1.94
DDX56Q9NY93 MIR487A-201ENST00000385009 80 ntBASIC2.95□□□□□ -1.94
DDX56Q9NY93 AL590004.2-201ENST00000404787 371 ntBASIC2.95□□□□□ -1.94
DDX56Q9NY93 RNU6-1156P-201ENST00000410365 100 ntBASIC2.95□□□□□ -1.94
DDX56Q9NY93 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.95□□□□□ -1.94
DDX56Q9NY93 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.95□□□□□ -1.94
DDX56Q9NY93 AC114982.1-201ENST00000469402 321 ntBASIC2.95□□□□□ -1.94
DDX56Q9NY93 AC105758.1-201ENST00000506038 399 ntBASIC2.95□□□□□ -1.94
DDX56Q9NY93 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.95□□□□□ -1.94
DDX56Q9NY93 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.95□□□□□ -1.94
DDX56Q9NY93 Y_RNA.661-201ENST00000516003 99 ntBASIC2.95□□□□□ -1.94
DDX56Q9NY93 RNU6-344P-201ENST00000516635 111 ntBASIC2.95□□□□□ -1.94
DDX56Q9NY93 SCARNA13-201ENST00000516672 275 ntBASIC2.95□□□□□ -1.94
DDX56Q9NY93 MIR2355-201ENST00000517199 87 ntBASIC2.95□□□□□ -1.94
DDX56Q9NY93 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.95□□□□□ -1.94
DDX56Q9NY93 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.95□□□□□ -1.94
DDX56Q9NY93 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.95□□□□□ -1.94
DDX56Q9NY93 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.95□□□□□ -1.94
DDX56Q9NY93 MIR1244-1-201ENST00000612829 85 ntBASIC2.95□□□□□ -1.94
DDX56Q9NY93 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.95□□□□□ -1.94
DDX56Q9NY93 MIR6733-201ENST00000635723 61 ntBASIC2.95□□□□□ -1.94
DDX56Q9NY93 MIR1244-3-201ENST00000635744 85 ntBASIC2.95□□□□□ -1.94
DDX56Q9NY93 MIR1244-2-201ENST00000636449 85 ntBASIC2.95□□□□□ -1.94
DDX56Q9NY93 MIR1244-4-202ENST00000636813 85 ntBASIC2.95□□□□□ -1.94
DDX56Q9NY93 MTND5P16-201ENST00000460269 1703 ntBASIC2.95□□□□□ -1.94
DDX56Q9NY93 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
DDX56Q9NY93 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
DDX56Q9NY93 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
DDX56Q9NY93 Y_RNA.132-201ENST00000363421 102 ntBASIC2.94□□□□□ -1.94
DDX56Q9NY93 SNORA67.1-201ENST00000364749 141 ntBASIC2.94□□□□□ -1.94
DDX56Q9NY93 Y_RNA.445-201ENST00000384168 102 ntBASIC2.94□□□□□ -1.94
DDX56Q9NY93 SNORD14D-201ENST00000384390 87 ntBASIC2.94□□□□□ -1.94
DDX56Q9NY93 RNU6-1011P-201ENST00000384668 107 ntBASIC2.94□□□□□ -1.94
DDX56Q9NY93 RNU6-308P-201ENST00000390957 107 ntBASIC2.94□□□□□ -1.94
DDX56Q9NY93 WARS2P1-201ENST00000429678 537 ntBASIC2.94□□□□□ -1.94
DDX56Q9NY93 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.94□□□□□ -1.94
DDX56Q9NY93 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.94□□□□□ -1.94
DDX56Q9NY93 RNU6-976P-201ENST00000516086 111 ntBASIC2.94□□□□□ -1.94
DDX56Q9NY93 SNRPGP18-201ENST00000553000 214 ntBASIC2.94□□□□□ -1.94
DDX56Q9NY93 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.94□□□□□ -1.94
DDX56Q9NY93 MIR4753-201ENST00000585119 83 ntBASIC2.94□□□□□ -1.94
DDX56Q9NY93 AC005296.1-201ENST00000616145 209 ntBASIC2.94□□□□□ -1.94
DDX56Q9NY93 AC134503.1-201ENST00000633048 54 ntBASIC2.94□□□□□ -1.94
DDX56Q9NY93 AC243829.7-201ENST00000633081 225 ntBASIC2.94□□□□□ -1.94
DDX56Q9NY93 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
DDX56Q9NY93 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.93□□□□□ -1.94
DDX56Q9NY93 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.93□□□□□ -1.94
DDX56Q9NY93 Y_RNA.128-201ENST00000363391 112 ntBASIC2.93□□□□□ -1.94
DDX56Q9NY93 RNU6-873P-201ENST00000363833 107 ntBASIC2.93□□□□□ -1.94
DDX56Q9NY93 Y_RNA.428-201ENST00000384078 102 ntBASIC2.93□□□□□ -1.94
DDX56Q9NY93 SNORA48.5-201ENST00000391143 135 ntBASIC2.93□□□□□ -1.94
DDX56Q9NY93 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.93□□□□□ -1.94
DDX56Q9NY93 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.93□□□□□ -1.94
DDX56Q9NY93 AC123900.1-201ENST00000420390 96 ntBASIC2.93□□□□□ -1.94
DDX56Q9NY93 AC005534.2-201ENST00000431047 433 ntBASIC2.93□□□□□ -1.94
DDX56Q9NY93 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.93□□□□□ -1.94
DDX56Q9NY93 AL137792.2-201ENST00000443484 235 ntBASIC2.93□□□□□ -1.94
DDX56Q9NY93 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.93□□□□□ -1.94
DDX56Q9NY93 AC003982.1-202ENST00000469928 248 ntBASIC2.93□□□□□ -1.94
DDX56Q9NY93 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
DDX56Q9NY93 DEFB131C-201ENST00000528817 165 ntBASIC2.93□□□□□ -1.94
DDX56Q9NY93 MIR5695-201ENST00000579717 85 ntBASIC2.93□□□□□ -1.94
DDX56Q9NY93 ZNF861P-201ENST00000588126 639 ntBASIC2.93□□□□□ -1.94
DDX56Q9NY93 AC025754.2-201ENST00000606491 432 ntBASIC2.93□□□□□ -1.94
DDX56Q9NY93 SNORD11B-201ENST00000607707 90 ntBASIC2.93□□□□□ -1.94
DDX56Q9NY93 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.93□□□□□ -1.94
DDX56Q9NY93 AC245884.12-201ENST00000615364 59 ntBASIC2.93□□□□□ -1.94
DDX56Q9NY93 MIR8057-201ENST00000620957 69 ntBASIC2.93□□□□□ -1.94
DDX56Q9NY93 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
DDX56Q9NY93 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
DDX56Q9NY93 ZNF271P-202ENST00000465539 1970 ntBASIC2.92□□□□□ -1.94
DDX56Q9NY93 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
DDX56Q9NY93 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.92□□□□□ -1.94
DDX56Q9NY93 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.92□□□□□ -1.94
DDX56Q9NY93 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.92□□□□□ -1.94
DDX56Q9NY93 RNU6-874P-201ENST00000362390 105 ntBASIC2.92□□□□□ -1.94
DDX56Q9NY93 Y_RNA.332-201ENST00000365271 113 ntBASIC2.92□□□□□ -1.94
DDX56Q9NY93 RNU6-1227P-201ENST00000383981 107 ntBASIC2.92□□□□□ -1.94
DDX56Q9NY93 Y_RNA.496-201ENST00000384444 101 ntBASIC2.92□□□□□ -1.94
DDX56Q9NY93 MIR10B-201ENST00000385011 110 ntBASIC2.92□□□□□ -1.94
DDX56Q9NY93 SNORA69.1-201ENST00000390904 137 ntBASIC2.92□□□□□ -1.94
DDX56Q9NY93 AC114482.1-201ENST00000418010 247 ntBASIC2.92□□□□□ -1.94
DDX56Q9NY93 AC007395.1-201ENST00000451333 677 ntBASIC2.92□□□□□ -1.94
DDX56Q9NY93 Y_RNA.631-201ENST00000459607 101 ntBASIC2.92□□□□□ -1.94
DDX56Q9NY93 ATP5EP1-201ENST00000510257 156 ntBASIC2.92□□□□□ -1.94
DDX56Q9NY93 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.92□□□□□ -1.94
DDX56Q9NY93 AC020661.2-201ENST00000560114 134 ntBASIC2.92□□□□□ -1.94
DDX56Q9NY93 MIR4719-201ENST00000585233 84 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 178.3 ms