Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CUEDC1Q9NWM3 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CUEDC1Q9NWM3 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.19□□□□□ -1.74
CUEDC1Q9NWM3 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CUEDC1Q9NWM3 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
CUEDC1Q9NWM3 AL513302.2-201ENST00000562313 1842 ntBASIC4.19□□□□□ -1.74
CUEDC1Q9NWM3 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CUEDC1Q9NWM3 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.19□□□□□ -1.74
CUEDC1Q9NWM3 RNU6-640P-201ENST00000363693 105 ntBASIC4.19□□□□□ -1.74
CUEDC1Q9NWM3 SNORD87-201ENST00000364849 89 ntBASIC4.19□□□□□ -1.74
CUEDC1Q9NWM3 RNA5SP22-201ENST00000365393 109 ntBASIC4.19□□□□□ -1.74
CUEDC1Q9NWM3 SNORA70.4-201ENST00000365509 134 ntBASIC4.19□□□□□ -1.74
CUEDC1Q9NWM3 MIR554-201ENST00000384874 96 ntBASIC4.19□□□□□ -1.74
CUEDC1Q9NWM3 MIR670-201ENST00000390142 98 ntBASIC4.19□□□□□ -1.74
CUEDC1Q9NWM3 RNU6-1275P-201ENST00000391087 107 ntBASIC4.19□□□□□ -1.74
CUEDC1Q9NWM3 RNU6-628P-201ENST00000410675 107 ntBASIC4.19□□□□□ -1.74
CUEDC1Q9NWM3 MIR1911-201ENST00000410783 80 ntBASIC4.19□□□□□ -1.74
CUEDC1Q9NWM3 RNA5SP104-201ENST00000410989 118 ntBASIC4.19□□□□□ -1.74
CUEDC1Q9NWM3 AL161651.1-201ENST00000440882 223 ntBASIC4.19□□□□□ -1.74
CUEDC1Q9NWM3 AL358232.1-201ENST00000448030 501 ntBASIC4.19□□□□□ -1.74
CUEDC1Q9NWM3 RPS4XP2-201ENST00000458402 793 ntBASIC4.19□□□□□ -1.74
CUEDC1Q9NWM3 APOA2-205ENST00000468465 421 ntTSL 2 BASIC4.19□□□□□ -1.74
CUEDC1Q9NWM3 RPS29P2-201ENST00000479278 136 ntBASIC4.19□□□□□ -1.74
CUEDC1Q9NWM3 AC025445.1-201ENST00000502728 300 ntBASIC4.19□□□□□ -1.74
CUEDC1Q9NWM3 Y_RNA.690-201ENST00000516603 95 ntBASIC4.19□□□□□ -1.74
CUEDC1Q9NWM3 TRAV8-5-201ENST00000537369 341 ntBASIC4.19□□□□□ -1.74
CUEDC1Q9NWM3 MIR3944-201ENST00000581277 108 ntBASIC4.19□□□□□ -1.74
CUEDC1Q9NWM3 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC4.19□□□□□ -1.74
CUEDC1Q9NWM3 AC025166.1-201ENST00000612411 163 ntBASIC4.19□□□□□ -1.74
CUEDC1Q9NWM3 uc_338.13-201ENST00000618243 179 ntBASIC4.19□□□□□ -1.74
CUEDC1Q9NWM3 AC005562.2-201ENST00000618264 111 ntBASIC4.19□□□□□ -1.74
CUEDC1Q9NWM3 RNA5SP196-201ENST00000625967 102 ntBASIC4.19□□□□□ -1.74
CUEDC1Q9NWM3 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CUEDC1Q9NWM3 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
CUEDC1Q9NWM3 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.19□□□□□ -1.74
CUEDC1Q9NWM3 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.18□□□□□ -1.74
CUEDC1Q9NWM3 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC4.18□□□□□ -1.74
CUEDC1Q9NWM3 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.18□□□□□ -1.74
CUEDC1Q9NWM3 RNU6-766P-201ENST00000362478 107 ntBASIC4.18□□□□□ -1.74
CUEDC1Q9NWM3 RNA5SP139-201ENST00000364340 117 ntBASIC4.18□□□□□ -1.74
CUEDC1Q9NWM3 RNU6-554P-201ENST00000410466 106 ntBASIC4.18□□□□□ -1.74
CUEDC1Q9NWM3 RN7SKP101-201ENST00000411376 320 ntBASIC4.18□□□□□ -1.74
CUEDC1Q9NWM3 AC004552.1-201ENST00000419089 348 ntBASIC4.18□□□□□ -1.74
CUEDC1Q9NWM3 AL139281.1-201ENST00000422120 335 ntBASIC4.18□□□□□ -1.74
CUEDC1Q9NWM3 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC4.18□□□□□ -1.74
CUEDC1Q9NWM3 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC4.18□□□□□ -1.74
CUEDC1Q9NWM3 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.18□□□□□ -1.74
CUEDC1Q9NWM3 AL441985.1-201ENST00000457727 251 ntBASIC4.18□□□□□ -1.74
CUEDC1Q9NWM3 RPS26P3-201ENST00000470205 348 ntBASIC4.18□□□□□ -1.74
CUEDC1Q9NWM3 AC090543.2-201ENST00000483963 348 ntBASIC4.18□□□□□ -1.74
CUEDC1Q9NWM3 AC004057.1-201ENST00000485827 348 ntBASIC4.18□□□□□ -1.74
CUEDC1Q9NWM3 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC4.18□□□□□ -1.74
CUEDC1Q9NWM3 RNU6-781P-201ENST00000516377 101 ntBASIC4.18□□□□□ -1.74
CUEDC1Q9NWM3 AP003730.1-201ENST00000524605 285 ntBASIC4.18□□□□□ -1.74
CUEDC1Q9NWM3 AC099778.2-201ENST00000610904 211 ntBASIC4.18□□□□□ -1.74
CUEDC1Q9NWM3 AL138721.1-201ENST00000616756 179 ntBASIC4.18□□□□□ -1.74
CUEDC1Q9NWM3 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.18□□□□□ -1.74
CUEDC1Q9NWM3 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
CUEDC1Q9NWM3 AC068647.1-201ENST00000489539 2265 ntBASIC4.18□□□□□ -1.74
CUEDC1Q9NWM3 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
CUEDC1Q9NWM3 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CUEDC1Q9NWM3 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.17□□□□□ -1.74
CUEDC1Q9NWM3 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC4.17□□□□□ -1.74
CUEDC1Q9NWM3 U3.8-201ENST00000363675 217 ntBASIC4.17□□□□□ -1.74
CUEDC1Q9NWM3 RNA5SP513-201ENST00000364648 118 ntBASIC4.17□□□□□ -1.74
CUEDC1Q9NWM3 RNU6-1336P-201ENST00000383886 109 ntBASIC4.17□□□□□ -1.74
CUEDC1Q9NWM3 RNU6-1080P-201ENST00000383982 107 ntBASIC4.17□□□□□ -1.74
CUEDC1Q9NWM3 Y_RNA.432-201ENST00000384087 111 ntBASIC4.17□□□□□ -1.74
CUEDC1Q9NWM3 RNU1-13P-201ENST00000384499 162 ntBASIC4.17□□□□□ -1.74
CUEDC1Q9NWM3 RNA5SP504-201ENST00000410676 117 ntBASIC4.17□□□□□ -1.74
CUEDC1Q9NWM3 AL591419.1-201ENST00000427423 339 ntBASIC4.17□□□□□ -1.74
CUEDC1Q9NWM3 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.17□□□□□ -1.74
CUEDC1Q9NWM3 RN7SL132P-201ENST00000478131 296 ntBASIC4.17□□□□□ -1.74
CUEDC1Q9NWM3 AC105137.1-201ENST00000484355 562 ntBASIC4.17□□□□□ -1.74
CUEDC1Q9NWM3 SRIP1-201ENST00000489235 288 ntBASIC4.17□□□□□ -1.74
CUEDC1Q9NWM3 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC4.17□□□□□ -1.74
CUEDC1Q9NWM3 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.17□□□□□ -1.74
CUEDC1Q9NWM3 AP003357.1-201ENST00000604497 148 ntBASIC4.17□□□□□ -1.74
CUEDC1Q9NWM3 AP001318.4-201ENST00000616637 121 ntBASIC4.17□□□□□ -1.74
CUEDC1Q9NWM3 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CUEDC1Q9NWM3 AC140479.6-201ENST00000633535 357 ntBASIC4.17□□□□□ -1.74
CUEDC1Q9NWM3 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.17□□□□□ -1.74
CUEDC1Q9NWM3 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
CUEDC1Q9NWM3 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
CUEDC1Q9NWM3 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CUEDC1Q9NWM3 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CUEDC1Q9NWM3 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.16□□□□□ -1.74
CUEDC1Q9NWM3 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.16□□□□□ -1.74
CUEDC1Q9NWM3 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.16□□□□□ -1.74
CUEDC1Q9NWM3 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.16□□□□□ -1.74
CUEDC1Q9NWM3 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.16□□□□□ -1.74
CUEDC1Q9NWM3 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.16□□□□□ -1.74
CUEDC1Q9NWM3 RNU1-75P-201ENST00000347264 129 ntBASIC4.16□□□□□ -1.74
CUEDC1Q9NWM3 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CUEDC1Q9NWM3 RNA5SP175-201ENST00000364275 119 ntBASIC4.16□□□□□ -1.74
CUEDC1Q9NWM3 RNA5SP366-201ENST00000365454 123 ntBASIC4.16□□□□□ -1.74
CUEDC1Q9NWM3 SNORD66.1-201ENST00000391230 76 ntBASIC4.16□□□□□ -1.74
CUEDC1Q9NWM3 AL159169.1-201ENST00000421119 127 ntBASIC4.16□□□□□ -1.74
CUEDC1Q9NWM3 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC4.16□□□□□ -1.74
CUEDC1Q9NWM3 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 166.2 ms