Protein–RNA interactions for Protein: Q9NV64

TMEM39A, Transmembrane protein 39A, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39AQ9NV64 AC096649.2-201ENST00000416186 393 ntBASIC3.85□□□□□ -1.79
TMEM39AQ9NV64 BTF3P11-201ENST00000426582 477 ntBASIC3.85□□□□□ -1.79
TMEM39AQ9NV64 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.85□□□□□ -1.79
TMEM39AQ9NV64 RPL27AP5-201ENST00000469428 449 ntBASIC3.85□□□□□ -1.79
TMEM39AQ9NV64 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.85□□□□□ -1.79
TMEM39AQ9NV64 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.85□□□□□ -1.79
TMEM39AQ9NV64 RNA5SP341-201ENST00000516261 117 ntBASIC3.85□□□□□ -1.79
TMEM39AQ9NV64 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.85□□□□□ -1.79
TMEM39AQ9NV64 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.85□□□□□ -1.79
TMEM39AQ9NV64 MIR5692C2-201ENST00000577959 77 ntBASIC3.85□□□□□ -1.79
TMEM39AQ9NV64 MIR5004-201ENST00000579078 107 ntBASIC3.85□□□□□ -1.79
TMEM39AQ9NV64 AC006380.1-201ENST00000603598 186 ntBASIC3.85□□□□□ -1.79
TMEM39AQ9NV64 AL138880.2-201ENST00000616214 239 ntBASIC3.85□□□□□ -1.79
TMEM39AQ9NV64 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.85□□□□□ -1.79
TMEM39AQ9NV64 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.85□□□□□ -1.79
TMEM39AQ9NV64 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
TMEM39AQ9NV64 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TMEM39AQ9NV64 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TMEM39AQ9NV64 Z83843.1-201ENST00000604070 3685 ntBASIC3.84□□□□□ -1.79
TMEM39AQ9NV64 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
TMEM39AQ9NV64 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
TMEM39AQ9NV64 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
TMEM39AQ9NV64 RNU6-1272P-201ENST00000362776 107 ntBASIC3.84□□□□□ -1.79
TMEM39AQ9NV64 RNU6-653P-201ENST00000363074 106 ntBASIC3.84□□□□□ -1.79
TMEM39AQ9NV64 Y_RNA.329-201ENST00000365209 107 ntBASIC3.84□□□□□ -1.79
TMEM39AQ9NV64 MIR613-201ENST00000385248 95 ntBASIC3.84□□□□□ -1.79
TMEM39AQ9NV64 AL357139.1-201ENST00000407792 426 ntBASIC3.84□□□□□ -1.79
TMEM39AQ9NV64 snoU13.14-201ENST00000459372 104 ntBASIC3.84□□□□□ -1.79
TMEM39AQ9NV64 SNRPGP3-201ENST00000469405 227 ntBASIC3.84□□□□□ -1.79
TMEM39AQ9NV64 HMGB3P3-201ENST00000510526 400 ntBASIC3.84□□□□□ -1.79
TMEM39AQ9NV64 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.84□□□□□ -1.79
TMEM39AQ9NV64 AL008718.3-201ENST00000610217 321 ntBASIC3.84□□□□□ -1.79
TMEM39AQ9NV64 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.84□□□□□ -1.79
TMEM39AQ9NV64 AL359854.1-201ENST00000614203 1594 ntBASIC3.84□□□□□ -1.8
TMEM39AQ9NV64 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.84□□□□□ -1.8
TMEM39AQ9NV64 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
TMEM39AQ9NV64 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
TMEM39AQ9NV64 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TMEM39AQ9NV64 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.83□□□□□ -1.8
TMEM39AQ9NV64 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
TMEM39AQ9NV64 RNU4-15P-201ENST00000362613 141 ntBASIC3.83□□□□□ -1.8
TMEM39AQ9NV64 Y_RNA.398-201ENST00000383952 99 ntBASIC3.83□□□□□ -1.8
TMEM39AQ9NV64 MIR1183-201ENST00000408856 89 ntBASIC3.83□□□□□ -1.8
TMEM39AQ9NV64 RNU6-1135P-201ENST00000411083 103 ntBASIC3.83□□□□□ -1.8
TMEM39AQ9NV64 AIMP1P2-201ENST00000425294 312 ntBASIC3.83□□□□□ -1.8
TMEM39AQ9NV64 AC027124.2-201ENST00000428249 105 ntBASIC3.83□□□□□ -1.8
TMEM39AQ9NV64 Z75741.1-201ENST00000446793 314 ntBASIC3.83□□□□□ -1.8
TMEM39AQ9NV64 FCF1P8-201ENST00000510322 597 ntBASIC3.83□□□□□ -1.8
TMEM39AQ9NV64 EIF4A1P12-201ENST00000551910 141 ntBASIC3.83□□□□□ -1.8
TMEM39AQ9NV64 TGIF1P1-201ENST00000558095 802 ntBASIC3.83□□□□□ -1.8
TMEM39AQ9NV64 AC027176.1-201ENST00000560204 514 ntBASIC3.83□□□□□ -1.8
TMEM39AQ9NV64 MIR4276-201ENST00000584832 70 ntBASIC3.83□□□□□ -1.8
TMEM39AQ9NV64 AC004832.4-201ENST00000608952 331 ntBASIC3.83□□□□□ -1.8
TMEM39AQ9NV64 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.83□□□□□ -1.8
TMEM39AQ9NV64 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.83□□□□□ -1.8
TMEM39AQ9NV64 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
TMEM39AQ9NV64 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TMEM39AQ9NV64 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TMEM39AQ9NV64 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TMEM39AQ9NV64 SNORA80A-201ENST00000363922 136 ntBASIC3.82□□□□□ -1.8
TMEM39AQ9NV64 RNU6-324P-201ENST00000363957 106 ntBASIC3.82□□□□□ -1.8
TMEM39AQ9NV64 RNU6-1264P-201ENST00000383891 107 ntBASIC3.82□□□□□ -1.8
TMEM39AQ9NV64 SNORA40.19-201ENST00000390846 128 ntBASIC3.82□□□□□ -1.8
TMEM39AQ9NV64 RNA5SP38-201ENST00000410750 119 ntBASIC3.82□□□□□ -1.8
TMEM39AQ9NV64 RPL23AP62-201ENST00000463396 453 ntBASIC3.82□□□□□ -1.8
TMEM39AQ9NV64 RPL23AP70-201ENST00000483361 460 ntBASIC3.82□□□□□ -1.8
TMEM39AQ9NV64 AC140059.1-201ENST00000489238 361 ntBASIC3.82□□□□□ -1.8
TMEM39AQ9NV64 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.82□□□□□ -1.8
TMEM39AQ9NV64 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.82□□□□□ -1.8
TMEM39AQ9NV64 AC005562.2-201ENST00000618264 111 ntBASIC3.82□□□□□ -1.8
TMEM39AQ9NV64 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
TMEM39AQ9NV64 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TMEM39AQ9NV64 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.81□□□□□ -1.8
TMEM39AQ9NV64 OTUD4P1-201ENST00000237841 3067 ntBASIC3.81□□□□□ -1.8
TMEM39AQ9NV64 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.81□□□□□ -1.8
TMEM39AQ9NV64 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
TMEM39AQ9NV64 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
TMEM39AQ9NV64 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
TMEM39AQ9NV64 MIR423-201ENST00000362201 94 ntBASIC3.81□□□□□ -1.8
TMEM39AQ9NV64 U3.9-201ENST00000363823 204 ntBASIC3.81□□□□□ -1.8
TMEM39AQ9NV64 RNU6-704P-201ENST00000364162 103 ntBASIC3.81□□□□□ -1.8
TMEM39AQ9NV64 RNU6-750P-201ENST00000390946 107 ntBASIC3.81□□□□□ -1.8
TMEM39AQ9NV64 U3.40-201ENST00000408706 208 ntBASIC3.81□□□□□ -1.8
TMEM39AQ9NV64 AC004866.1-201ENST00000411748 78 ntBASIC3.81□□□□□ -1.8
TMEM39AQ9NV64 NDUFB1P1-201ENST00000435191 180 ntBASIC3.81□□□□□ -1.8
TMEM39AQ9NV64 AC004386.2-201ENST00000441858 148 ntBASIC3.81□□□□□ -1.8
TMEM39AQ9NV64 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TMEM39AQ9NV64 RNU6-436P-201ENST00000516171 114 ntBASIC3.81□□□□□ -1.8
TMEM39AQ9NV64 RNU2-12P-201ENST00000517216 168 ntBASIC3.81□□□□□ -1.8
TMEM39AQ9NV64 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.81□□□□□ -1.8
TMEM39AQ9NV64 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.81□□□□□ -1.8
TMEM39AQ9NV64 SNORD11B-201ENST00000607707 90 ntBASIC3.81□□□□□ -1.8
TMEM39AQ9NV64 TCL6_2.1-201ENST00000615162 119 ntBASIC3.81□□□□□ -1.8
TMEM39AQ9NV64 AC010680.1-201ENST00000590024 3590 ntBASIC3.81□□□□□ -1.8
TMEM39AQ9NV64 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TMEM39AQ9NV64 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
TMEM39AQ9NV64 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.81□□□□□ -1.8
TMEM39AQ9NV64 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TMEM39AQ9NV64 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TMEM39AQ9NV64 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 140.5 ms