Protein–RNA interactions for Protein: Q9NUD5

ZCCHC3, Zinc finger CCHC domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3Q9NUD5 FAM206BP-201ENST00000510179 541 ntBASIC1.74□□□□□ -2.13
ZCCHC3Q9NUD5 SUB1P4-201ENST00000566062 339 ntBASIC1.74□□□□□ -2.13
ZCCHC3Q9NUD5 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.74□□□□□ -2.13
ZCCHC3Q9NUD5 AC103810.8-201ENST00000607347 118 ntBASIC1.74□□□□□ -2.13
ZCCHC3Q9NUD5 RMST_3.1-201ENST00000611651 109 ntBASIC1.74□□□□□ -2.13
ZCCHC3Q9NUD5 ZNF355P-201ENST00000427301 3216 ntBASIC1.74□□□□□ -2.13
ZCCHC3Q9NUD5 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
ZCCHC3Q9NUD5 MTND5P9-201ENST00000503854 1755 ntBASIC1.74□□□□□ -2.13
ZCCHC3Q9NUD5 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
ZCCHC3Q9NUD5 RNY4P14-201ENST00000363656 96 ntBASIC1.73□□□□□ -2.13
ZCCHC3Q9NUD5 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.73□□□□□ -2.13
ZCCHC3Q9NUD5 RNU6-1026P-201ENST00000384465 108 ntBASIC1.73□□□□□ -2.13
ZCCHC3Q9NUD5 ZNF885P-201ENST00000420174 1098 ntBASIC1.73□□□□□ -2.13
ZCCHC3Q9NUD5 AL589823.1-201ENST00000429577 183 ntBASIC1.73□□□□□ -2.13
ZCCHC3Q9NUD5 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.73□□□□□ -2.13
ZCCHC3Q9NUD5 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.73□□□□□ -2.13
ZCCHC3Q9NUD5 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.73□□□□□ -2.13
ZCCHC3Q9NUD5 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.73□□□□□ -2.13
ZCCHC3Q9NUD5 AC007395.1-201ENST00000451333 677 ntBASIC1.73□□□□□ -2.13
ZCCHC3Q9NUD5 AC010531.2-201ENST00000465012 153 ntBASIC1.73□□□□□ -2.13
ZCCHC3Q9NUD5 TRBV12-1-201ENST00000479785 344 ntBASIC1.73□□□□□ -2.13
ZCCHC3Q9NUD5 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.73□□□□□ -2.13
ZCCHC3Q9NUD5 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.73□□□□□ -2.13
ZCCHC3Q9NUD5 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.73□□□□□ -2.13
ZCCHC3Q9NUD5 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.73□□□□□ -2.13
ZCCHC3Q9NUD5 AC016957.1-201ENST00000534895 309 ntBASIC1.73□□□□□ -2.13
ZCCHC3Q9NUD5 GNAI2P1-201ENST00000541815 315 ntBASIC1.73□□□□□ -2.13
ZCCHC3Q9NUD5 AC026470.2-201ENST00000561492 181 ntBASIC1.73□□□□□ -2.13
ZCCHC3Q9NUD5 TPRKBP2-201ENST00000565969 475 ntBASIC1.73□□□□□ -2.13
ZCCHC3Q9NUD5 AC146944.4-201ENST00000602697 718 ntBASIC1.73□□□□□ -2.13
ZCCHC3Q9NUD5 AC016727.2-201ENST00000603988 621 ntBASIC1.73□□□□□ -2.13
ZCCHC3Q9NUD5 AC012493.3-201ENST00000604494 112 ntBASIC1.73□□□□□ -2.13
ZCCHC3Q9NUD5 MIR3976-201ENST00000606807 139 ntBASIC1.73□□□□□ -2.13
ZCCHC3Q9NUD5 AL138726.1-201ENST00000614873 333 ntBASIC1.73□□□□□ -2.13
ZCCHC3Q9NUD5 AC005562.2-201ENST00000618264 111 ntBASIC1.73□□□□□ -2.13
ZCCHC3Q9NUD5 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.73□□□□□ -2.13
ZCCHC3Q9NUD5 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.73□□□□□ -2.13
ZCCHC3Q9NUD5 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.73□□□□□ -2.13
ZCCHC3Q9NUD5 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.72□□□□□ -2.13
ZCCHC3Q9NUD5 Y_RNA.9-201ENST00000362354 101 ntBASIC1.72□□□□□ -2.13
ZCCHC3Q9NUD5 RNU6-1252P-201ENST00000363054 104 ntBASIC1.72□□□□□ -2.13
ZCCHC3Q9NUD5 SNORD116-4-201ENST00000384733 96 ntBASIC1.72□□□□□ -2.13
ZCCHC3Q9NUD5 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.72□□□□□ -2.13
ZCCHC3Q9NUD5 MTCO3P18-201ENST00000440206 761 ntBASIC1.72□□□□□ -2.13
ZCCHC3Q9NUD5 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.72□□□□□ -2.13
ZCCHC3Q9NUD5 AL513124.1-201ENST00000450410 614 ntBASIC1.72□□□□□ -2.13
ZCCHC3Q9NUD5 OR2AQ1P-201ENST00000451972 200 ntBASIC1.72□□□□□ -2.13
ZCCHC3Q9NUD5 RPS29P21-201ENST00000496272 170 ntBASIC1.72□□□□□ -2.13
ZCCHC3Q9NUD5 AC097473.1-201ENST00000508142 408 ntBASIC1.72□□□□□ -2.13
ZCCHC3Q9NUD5 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.72□□□□□ -2.13
ZCCHC3Q9NUD5 MTND1P35-201ENST00000526739 508 ntBASIC1.72□□□□□ -2.13
ZCCHC3Q9NUD5 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.72□□□□□ -2.13
ZCCHC3Q9NUD5 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.72□□□□□ -2.13
ZCCHC3Q9NUD5 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.72□□□□□ -2.13
ZCCHC3Q9NUD5 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
ZCCHC3Q9NUD5 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
ZCCHC3Q9NUD5 Y_RNA.3-201ENST00000362331 103 ntBASIC1.71□□□□□ -2.14
ZCCHC3Q9NUD5 RNU6-545P-201ENST00000362681 104 ntBASIC1.71□□□□□ -2.14
ZCCHC3Q9NUD5 Y_RNA.100-201ENST00000363141 102 ntBASIC1.71□□□□□ -2.14
ZCCHC3Q9NUD5 Y_RNA.135-201ENST00000363439 95 ntBASIC1.71□□□□□ -2.14
ZCCHC3Q9NUD5 Y_RNA.151-201ENST00000363566 112 ntBASIC1.71□□□□□ -2.14
ZCCHC3Q9NUD5 Y_RNA.554-201ENST00000384672 102 ntBASIC1.71□□□□□ -2.14
ZCCHC3Q9NUD5 RNU6-95P-201ENST00000384697 107 ntBASIC1.71□□□□□ -2.14
ZCCHC3Q9NUD5 MIR23A-201ENST00000385245 73 ntBASIC1.71□□□□□ -2.14
ZCCHC3Q9NUD5 MIR300-201ENST00000401138 83 ntBASIC1.71□□□□□ -2.14
ZCCHC3Q9NUD5 RNU6-373P-201ENST00000411247 98 ntBASIC1.71□□□□□ -2.14
ZCCHC3Q9NUD5 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.71□□□□□ -2.14
ZCCHC3Q9NUD5 YWHAEP4-201ENST00000505390 198 ntBASIC1.71□□□□□ -2.14
ZCCHC3Q9NUD5 RNU6-256P-201ENST00000516747 97 ntBASIC1.71□□□□□ -2.14
ZCCHC3Q9NUD5 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.71□□□□□ -2.14
ZCCHC3Q9NUD5 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.71□□□□□ -2.14
ZCCHC3Q9NUD5 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.71□□□□□ -2.14
ZCCHC3Q9NUD5 AC012557.2-201ENST00000605919 418 ntBASIC1.71□□□□□ -2.14
ZCCHC3Q9NUD5 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.71□□□□□ -2.14
ZCCHC3Q9NUD5 TCL6_2.1-201ENST00000615162 119 ntBASIC1.71□□□□□ -2.14
ZCCHC3Q9NUD5 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.71□□□□□ -2.14
ZCCHC3Q9NUD5 AL356292.1-201ENST00000283110 373 ntBASIC1.7□□□□□ -2.14
ZCCHC3Q9NUD5 Y_RNA.414-201ENST00000384011 101 ntBASIC1.7□□□□□ -2.14
ZCCHC3Q9NUD5 SNORA70B-201ENST00000384210 135 ntBASIC1.7□□□□□ -2.14
ZCCHC3Q9NUD5 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
ZCCHC3Q9NUD5 AL079342.1-201ENST00000401460 267 ntBASIC1.7□□□□□ -2.14
ZCCHC3Q9NUD5 NCOR1P3-201ENST00000420479 303 ntBASIC1.7□□□□□ -2.14
ZCCHC3Q9NUD5 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.7□□□□□ -2.14
ZCCHC3Q9NUD5 AC003989.2-201ENST00000440224 169 ntBASIC1.7□□□□□ -2.14
ZCCHC3Q9NUD5 AL357134.1-201ENST00000445848 426 ntBASIC1.7□□□□□ -2.14
ZCCHC3Q9NUD5 MTND1P11-201ENST00000456661 876 ntBASIC1.7□□□□□ -2.14
ZCCHC3Q9NUD5 AC007215.1-201ENST00000464893 276 ntBASIC1.7□□□□□ -2.14
ZCCHC3Q9NUD5 AC010409.1-201ENST00000487382 476 ntBASIC1.7□□□□□ -2.14
ZCCHC3Q9NUD5 RPL23AP75-201ENST00000491601 451 ntBASIC1.7□□□□□ -2.14
ZCCHC3Q9NUD5 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.7□□□□□ -2.14
ZCCHC3Q9NUD5 AC107393.1-201ENST00000512403 346 ntBASIC1.7□□□□□ -2.14
ZCCHC3Q9NUD5 MTND1P5-201ENST00000517906 940 ntBASIC1.7□□□□□ -2.14
ZCCHC3Q9NUD5 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.7□□□□□ -2.14
ZCCHC3Q9NUD5 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.7□□□□□ -2.14
ZCCHC3Q9NUD5 AC110588.1-201ENST00000559699 137 ntBASIC1.7□□□□□ -2.14
ZCCHC3Q9NUD5 MIR4419B-201ENST00000577260 68 ntBASIC1.7□□□□□ -2.14
ZCCHC3Q9NUD5 MIR3672-201ENST00000584290 82 ntBASIC1.7□□□□□ -2.14
ZCCHC3Q9NUD5 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
ZCCHC3Q9NUD5 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.7□□□□□ -2.14
ZCCHC3Q9NUD5 AL159152.1-201ENST00000635019 2587 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 174.3 ms