Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 AL929325.1-201ENST00000603096 117 ntBASIC0.71□□□□□ -2.3
UBQLN4Q9NRR5 AC136443.5-201ENST00000603741 370 ntBASIC0.71□□□□□ -2.3
UBQLN4Q9NRR5 AC064807.4-201ENST00000607201 407 ntBASIC0.71□□□□□ -2.3
UBQLN4Q9NRR5 AC091304.9-201ENST00000612091 226 ntBASIC0.71□□□□□ -2.3
UBQLN4Q9NRR5 AL078595.3-201ENST00000623815 1166 ntBASIC0.71□□□□□ -2.3
UBQLN4Q9NRR5 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC0.71□□□□□ -2.3
UBQLN4Q9NRR5 AC106754.1-201ENST00000562632 1513 ntBASIC0.7□□□□□ -2.3
UBQLN4Q9NRR5 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
UBQLN4Q9NRR5 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
UBQLN4Q9NRR5 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
UBQLN4Q9NRR5 Y_RNA.4-201ENST00000362333 112 ntBASIC0.7□□□□□ -2.3
UBQLN4Q9NRR5 RNU6-1123P-201ENST00000362347 106 ntBASIC0.7□□□□□ -2.3
UBQLN4Q9NRR5 RNU6-393P-201ENST00000384475 107 ntBASIC0.7□□□□□ -2.3
UBQLN4Q9NRR5 RNA5SP109-201ENST00000391010 116 ntBASIC0.7□□□□□ -2.3
UBQLN4Q9NRR5 MIR300-201ENST00000401138 83 ntBASIC0.7□□□□□ -2.3
UBQLN4Q9NRR5 MIR1283-1-201ENST00000408494 87 ntBASIC0.7□□□□□ -2.3
UBQLN4Q9NRR5 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.7□□□□□ -2.3
UBQLN4Q9NRR5 AC013410.2-201ENST00000422627 201 ntBASIC0.7□□□□□ -2.3
UBQLN4Q9NRR5 AC010154.1-201ENST00000425857 269 ntBASIC0.7□□□□□ -2.3
UBQLN4Q9NRR5 AC004941.2-201ENST00000427009 228 ntBASIC0.7□□□□□ -2.3
UBQLN4Q9NRR5 AC004854.1-201ENST00000440356 349 ntBASIC0.7□□□□□ -2.3
UBQLN4Q9NRR5 RPS29P15-201ENST00000458329 171 ntBASIC0.7□□□□□ -2.3
UBQLN4Q9NRR5 snoU13.6-201ENST00000458785 104 ntBASIC0.7□□□□□ -2.3
UBQLN4Q9NRR5 AC010486.2-201ENST00000505572 483 ntBASIC0.7□□□□□ -2.3
UBQLN4Q9NRR5 AC103851.1-201ENST00000506833 274 ntBASIC0.7□□□□□ -2.3
UBQLN4Q9NRR5 RNU6-165P-201ENST00000517170 99 ntBASIC0.7□□□□□ -2.3
UBQLN4Q9NRR5 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.7□□□□□ -2.3
UBQLN4Q9NRR5 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC0.7□□□□□ -2.3
UBQLN4Q9NRR5 AC109446.2-201ENST00000567872 497 ntBASIC0.7□□□□□ -2.3
UBQLN4Q9NRR5 AP001836.1-201ENST00000604675 523 ntBASIC0.7□□□□□ -2.3
UBQLN4Q9NRR5 AL353149.1-201ENST00000610667 244 ntBASIC0.7□□□□□ -2.3
UBQLN4Q9NRR5 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.7□□□□□ -2.3
UBQLN4Q9NRR5 AC006001.4-201ENST00000622243 395 ntBASIC0.7□□□□□ -2.3
UBQLN4Q9NRR5 AC022418.1-201ENST00000624118 445 ntBASIC0.7□□□□□ -2.3
UBQLN4Q9NRR5 OR4G1P-203ENST00000641984 1631 ntBASIC0.69□□□□□ -2.3
UBQLN4Q9NRR5 RNU6-500P-201ENST00000362349 107 ntBASIC0.69□□□□□ -2.3
UBQLN4Q9NRR5 snoU2-30.2-201ENST00000362805 70 ntBASIC0.69□□□□□ -2.3
UBQLN4Q9NRR5 RNU6-1029P-201ENST00000384109 107 ntBASIC0.69□□□□□ -2.3
UBQLN4Q9NRR5 RNU6-417P-201ENST00000384712 107 ntBASIC0.69□□□□□ -2.3
UBQLN4Q9NRR5 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
UBQLN4Q9NRR5 SNORD70.1-201ENST00000391007 85 ntBASIC0.69□□□□□ -2.3
UBQLN4Q9NRR5 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.69□□□□□ -2.3
UBQLN4Q9NRR5 Y_RNA.598-201ENST00000410480 95 ntBASIC0.69□□□□□ -2.3
UBQLN4Q9NRR5 RNU6-195P-201ENST00000411352 109 ntBASIC0.69□□□□□ -2.3
UBQLN4Q9NRR5 MTCO2P8-201ENST00000412213 658 ntBASIC0.69□□□□□ -2.3
UBQLN4Q9NRR5 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC0.69□□□□□ -2.3
UBQLN4Q9NRR5 AL354692.1-201ENST00000423044 315 ntBASIC0.69□□□□□ -2.3
UBQLN4Q9NRR5 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.69□□□□□ -2.3
UBQLN4Q9NRR5 AL596276.1-201ENST00000434465 418 ntBASIC0.69□□□□□ -2.3
UBQLN4Q9NRR5 TAF9P1-201ENST00000445421 515 ntBASIC0.69□□□□□ -2.3
UBQLN4Q9NRR5 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.69□□□□□ -2.3
UBQLN4Q9NRR5 TAF9P2-201ENST00000454958 515 ntBASIC0.69□□□□□ -2.3
UBQLN4Q9NRR5 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC0.69□□□□□ -2.3
UBQLN4Q9NRR5 RNU7-182P-201ENST00000459009 62 ntBASIC0.69□□□□□ -2.3
UBQLN4Q9NRR5 MTCO2P6-201ENST00000463134 685 ntBASIC0.69□□□□□ -2.3
UBQLN4Q9NRR5 RNU6-311P-201ENST00000516224 102 ntBASIC0.69□□□□□ -2.3
UBQLN4Q9NRR5 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.69□□□□□ -2.3
UBQLN4Q9NRR5 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.69□□□□□ -2.3
UBQLN4Q9NRR5 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.69□□□□□ -2.3
UBQLN4Q9NRR5 MIR4653-201ENST00000585107 83 ntBASIC0.69□□□□□ -2.3
UBQLN4Q9NRR5 RSL24D1P11-201ENST00000591045 491 ntBASIC0.69□□□□□ -2.3
UBQLN4Q9NRR5 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.69□□□□□ -2.3
UBQLN4Q9NRR5 Z84480.1-201ENST00000605131 311 ntBASIC0.69□□□□□ -2.3
UBQLN4Q9NRR5 MIR6504-201ENST00000613520 61 ntBASIC0.69□□□□□ -2.3
UBQLN4Q9NRR5 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC0.69□□□□□ -2.3
UBQLN4Q9NRR5 MIR8070-201ENST00000616510 88 ntBASIC0.69□□□□□ -2.3
UBQLN4Q9NRR5 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.69□□□□□ -2.3
UBQLN4Q9NRR5 SNORD113-6-201ENST00000363345 75 ntBASIC0.68□□□□□ -2.3
UBQLN4Q9NRR5 RNU6-534P-201ENST00000364877 106 ntBASIC0.68□□□□□ -2.3
UBQLN4Q9NRR5 Y_RNA.480-201ENST00000384364 102 ntBASIC0.68□□□□□ -2.3
UBQLN4Q9NRR5 RNU6-434P-201ENST00000384376 107 ntBASIC0.68□□□□□ -2.3
UBQLN4Q9NRR5 MIR515-2-201ENST00000384883 83 ntBASIC0.68□□□□□ -2.3
UBQLN4Q9NRR5 MIR515-1-201ENST00000384884 83 ntBASIC0.68□□□□□ -2.3
UBQLN4Q9NRR5 RNU6-910P-201ENST00000390844 107 ntBASIC0.68□□□□□ -2.3
UBQLN4Q9NRR5 RPL21P1-201ENST00000399532 476 ntBASIC0.68□□□□□ -2.3
UBQLN4Q9NRR5 MIR1253-201ENST00000408273 105 ntBASIC0.68□□□□□ -2.3
UBQLN4Q9NRR5 GPR143P-201ENST00000434155 205 ntBASIC0.68□□□□□ -2.3
UBQLN4Q9NRR5 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.68□□□□□ -2.3
UBQLN4Q9NRR5 AC079382.1-201ENST00000493346 557 ntBASIC0.68□□□□□ -2.3
UBQLN4Q9NRR5 PSMC1P5-201ENST00000512850 177 ntBASIC0.68□□□□□ -2.3
UBQLN4Q9NRR5 SNORA31.2-201ENST00000516019 134 ntBASIC0.68□□□□□ -2.3
UBQLN4Q9NRR5 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.68□□□□□ -2.3
UBQLN4Q9NRR5 DEFB131C-201ENST00000528817 165 ntBASIC0.68□□□□□ -2.3
UBQLN4Q9NRR5 AP003461.1-201ENST00000528866 78 ntBASIC0.68□□□□□ -2.3
UBQLN4Q9NRR5 MIR5006-201ENST00000583027 110 ntBASIC0.68□□□□□ -2.3
UBQLN4Q9NRR5 Z99497.2-201ENST00000603634 310 ntBASIC0.68□□□□□ -2.3
UBQLN4Q9NRR5 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.68□□□□□ -2.3
UBQLN4Q9NRR5 AC021506.2-201ENST00000612354 169 ntBASIC0.68□□□□□ -2.3
UBQLN4Q9NRR5 AC005520.5-201ENST00000613926 164 ntBASIC0.68□□□□□ -2.3
UBQLN4Q9NRR5 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.68□□□□□ -2.3
UBQLN4Q9NRR5 AL136221.1-201ENST00000621449 509 ntBASIC0.68□□□□□ -2.3
UBQLN4Q9NRR5 SNORA43.4-201ENST00000629559 138 ntBASIC0.68□□□□□ -2.3
UBQLN4Q9NRR5 SEPT14P19-203ENST00000633205 211 ntBASIC0.68□□□□□ -2.3
UBQLN4Q9NRR5 AC018630.2-201ENST00000534866 2403 ntBASIC0.67□□□□□ -2.3
UBQLN4Q9NRR5 RNU6-562P-201ENST00000362731 107 ntBASIC0.67□□□□□ -2.3
UBQLN4Q9NRR5 Y_RNA.164-201ENST00000363709 102 ntBASIC0.67□□□□□ -2.3
UBQLN4Q9NRR5 RNU1-36P-201ENST00000365130 165 ntBASIC0.67□□□□□ -2.3
UBQLN4Q9NRR5 SNORD114-22-201ENST00000365423 72 ntBASIC0.67□□□□□ -2.3
UBQLN4Q9NRR5 MIR549A-201ENST00000385268 96 ntBASIC0.67□□□□□ -2.3
UBQLN4Q9NRR5 RNU4-46P-201ENST00000410818 138 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms