Protein–RNA interactions for Protein: Q9NRJ3

CCL28, C-C motif chemokine 28, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28Q9NRJ3 AC009310.1-201ENST00000414414 451 ntBASIC1.39□□□□□ -2.19
CCL28Q9NRJ3 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.39□□□□□ -2.19
CCL28Q9NRJ3 ZNF885P-201ENST00000420174 1098 ntBASIC1.39□□□□□ -2.19
CCL28Q9NRJ3 RNA5SP57-201ENST00000459463 123 ntBASIC1.39□□□□□ -2.19
CCL28Q9NRJ3 AC130509.1-201ENST00000464158 433 ntBASIC1.39□□□□□ -2.19
CCL28Q9NRJ3 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.39□□□□□ -2.19
CCL28Q9NRJ3 RNA5SP182-201ENST00000516064 82 ntBASIC1.39□□□□□ -2.19
CCL28Q9NRJ3 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.39□□□□□ -2.19
CCL28Q9NRJ3 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.39□□□□□ -2.19
CCL28Q9NRJ3 AC026470.2-201ENST00000561492 181 ntBASIC1.39□□□□□ -2.19
CCL28Q9NRJ3 MIR4648-201ENST00000580107 72 ntBASIC1.39□□□□□ -2.19
CCL28Q9NRJ3 MIR4713-201ENST00000582691 75 ntBASIC1.39□□□□□ -2.19
CCL28Q9NRJ3 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
CCL28Q9NRJ3 AL138726.1-201ENST00000614873 333 ntBASIC1.39□□□□□ -2.19
CCL28Q9NRJ3 U4.5-201ENST00000617137 123 ntBASIC1.39□□□□□ -2.19
CCL28Q9NRJ3 AC005562.2-201ENST00000618264 111 ntBASIC1.39□□□□□ -2.19
CCL28Q9NRJ3 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.39□□□□□ -2.19
CCL28Q9NRJ3 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.38□□□□□ -2.19
CCL28Q9NRJ3 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
CCL28Q9NRJ3 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
CCL28Q9NRJ3 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
CCL28Q9NRJ3 RNU6-562P-201ENST00000362731 107 ntBASIC1.38□□□□□ -2.19
CCL28Q9NRJ3 Y_RNA.135-201ENST00000363439 95 ntBASIC1.38□□□□□ -2.19
CCL28Q9NRJ3 Y_RNA.414-201ENST00000384011 101 ntBASIC1.38□□□□□ -2.19
CCL28Q9NRJ3 Y_RNA.516-201ENST00000384541 124 ntBASIC1.38□□□□□ -2.19
CCL28Q9NRJ3 RNU6-95P-201ENST00000384697 107 ntBASIC1.38□□□□□ -2.19
CCL28Q9NRJ3 SNORA40.18-201ENST00000391200 128 ntBASIC1.38□□□□□ -2.19
CCL28Q9NRJ3 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
CCL28Q9NRJ3 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.38□□□□□ -2.19
CCL28Q9NRJ3 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.38□□□□□ -2.19
CCL28Q9NRJ3 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.38□□□□□ -2.19
CCL28Q9NRJ3 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.38□□□□□ -2.19
CCL28Q9NRJ3 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.38□□□□□ -2.19
CCL28Q9NRJ3 AF186996.7-201ENST00000492781 209 ntBASIC1.38□□□□□ -2.19
CCL28Q9NRJ3 RNVU1-2-201ENST00000516326 135 ntBASIC1.38□□□□□ -2.19
CCL28Q9NRJ3 RNU6-256P-201ENST00000516747 97 ntBASIC1.38□□□□□ -2.19
CCL28Q9NRJ3 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.38□□□□□ -2.19
CCL28Q9NRJ3 MIR3976-201ENST00000606807 139 ntBASIC1.38□□□□□ -2.19
CCL28Q9NRJ3 MIR6852-201ENST00000621699 66 ntBASIC1.38□□□□□ -2.19
CCL28Q9NRJ3 AC022513.1-201ENST00000624512 117 ntBASIC1.38□□□□□ -2.19
CCL28Q9NRJ3 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.38□□□□□ -2.19
CCL28Q9NRJ3 Y_RNA.89-201ENST00000363031 102 ntBASIC1.37□□□□□ -2.19
CCL28Q9NRJ3 RNU4-12P-201ENST00000365233 139 ntBASIC1.37□□□□□ -2.19
CCL28Q9NRJ3 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.37□□□□□ -2.19
CCL28Q9NRJ3 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.37□□□□□ -2.19
CCL28Q9NRJ3 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
CCL28Q9NRJ3 AL033519.2-201ENST00000403958 392 ntBASIC1.37□□□□□ -2.19
CCL28Q9NRJ3 RN7SKP192-201ENST00000411291 327 ntBASIC1.37□□□□□ -2.19
CCL28Q9NRJ3 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.37□□□□□ -2.19
CCL28Q9NRJ3 C8orf59P1-201ENST00000429930 303 ntBASIC1.37□□□□□ -2.19
CCL28Q9NRJ3 DAP3P1-201ENST00000441522 278 ntBASIC1.37□□□□□ -2.19
CCL28Q9NRJ3 AL513124.1-201ENST00000450410 614 ntBASIC1.37□□□□□ -2.19
CCL28Q9NRJ3 AC007395.1-201ENST00000451333 677 ntBASIC1.37□□□□□ -2.19
CCL28Q9NRJ3 OR2AQ1P-201ENST00000451972 200 ntBASIC1.37□□□□□ -2.19
CCL28Q9NRJ3 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.37□□□□□ -2.19
CCL28Q9NRJ3 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.37□□□□□ -2.19
CCL28Q9NRJ3 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.37□□□□□ -2.19
CCL28Q9NRJ3 AC023043.2-201ENST00000589678 1026 ntBASIC1.37□□□□□ -2.19
CCL28Q9NRJ3 AC016727.2-201ENST00000603988 621 ntBASIC1.37□□□□□ -2.19
CCL28Q9NRJ3 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.37□□□□□ -2.19
CCL28Q9NRJ3 AC084768.2-201ENST00000622736 221 ntBASIC1.37□□□□□ -2.19
CCL28Q9NRJ3 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.37□□□□□ -2.19
CCL28Q9NRJ3 MTND5P9-201ENST00000503854 1755 ntBASIC1.36□□□□□ -2.19
CCL28Q9NRJ3 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.36□□□□□ -2.19
CCL28Q9NRJ3 Y_RNA.151-201ENST00000363566 112 ntBASIC1.36□□□□□ -2.19
CCL28Q9NRJ3 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.36□□□□□ -2.19
CCL28Q9NRJ3 RNU6-877P-201ENST00000383868 107 ntBASIC1.36□□□□□ -2.19
CCL28Q9NRJ3 RNU6-790P-201ENST00000384479 105 ntBASIC1.36□□□□□ -2.19
CCL28Q9NRJ3 Y_RNA.573-201ENST00000384763 105 ntBASIC1.36□□□□□ -2.19
CCL28Q9NRJ3 MIR300-201ENST00000401138 83 ntBASIC1.36□□□□□ -2.19
CCL28Q9NRJ3 RNA5SP118-201ENST00000410385 109 ntBASIC1.36□□□□□ -2.19
CCL28Q9NRJ3 RNA5SP100-201ENST00000410903 110 ntBASIC1.36□□□□□ -2.19
CCL28Q9NRJ3 RNA5SP59-201ENST00000410922 110 ntBASIC1.36□□□□□ -2.19
CCL28Q9NRJ3 AL590632.1-201ENST00000424289 371 ntBASIC1.36□□□□□ -2.19
CCL28Q9NRJ3 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.36□□□□□ -2.19
CCL28Q9NRJ3 MTCO1P44-201ENST00000441935 243 ntBASIC1.36□□□□□ -2.19
CCL28Q9NRJ3 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.36□□□□□ -2.19
CCL28Q9NRJ3 PCMTD1P1-201ENST00000455560 355 ntBASIC1.36□□□□□ -2.19
CCL28Q9NRJ3 MTND1P11-201ENST00000456661 876 ntBASIC1.36□□□□□ -2.19
CCL28Q9NRJ3 AC010531.2-201ENST00000465012 153 ntBASIC1.36□□□□□ -2.19
CCL28Q9NRJ3 AC087477.1-201ENST00000465747 340 ntBASIC1.36□□□□□ -2.19
CCL28Q9NRJ3 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.36□□□□□ -2.19
CCL28Q9NRJ3 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.36□□□□□ -2.19
CCL28Q9NRJ3 Y_RNA.655-201ENST00000515919 96 ntBASIC1.36□□□□□ -2.19
CCL28Q9NRJ3 RNU2-44P-201ENST00000516795 194 ntBASIC1.36□□□□□ -2.19
CCL28Q9NRJ3 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.36□□□□□ -2.19
CCL28Q9NRJ3 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.36□□□□□ -2.19
CCL28Q9NRJ3 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.36□□□□□ -2.19
CCL28Q9NRJ3 TCL6_2.1-201ENST00000615162 119 ntBASIC1.36□□□□□ -2.19
CCL28Q9NRJ3 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.36□□□□□ -2.19
CCL28Q9NRJ3 AC137590.2-201ENST00000619709 240 ntBASIC1.36□□□□□ -2.19
CCL28Q9NRJ3 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.36□□□□□ -2.19
CCL28Q9NRJ3 AC090617.10-201ENST00000624308 134 ntBASIC1.36□□□□□ -2.19
CCL28Q9NRJ3 AL359697.1-201ENST00000624879 587 ntBASIC1.36□□□□□ -2.19
CCL28Q9NRJ3 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.36□□□□□ -2.19
CCL28Q9NRJ3 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.36□□□□□ -2.19
CCL28Q9NRJ3 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.36□□□□□ -2.19
CCL28Q9NRJ3 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
CCL28Q9NRJ3 RNU6-545P-201ENST00000362681 104 ntBASIC1.35□□□□□ -2.19
CCL28Q9NRJ3 SNORD50.1-201ENST00000362987 71 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms