Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 AC090517.1-201ENST00000569307 266 ntBASIC2.3□□□□□ -2.04
HINT3Q9NQE9 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.3□□□□□ -2.04
HINT3Q9NQE9 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.3□□□□□ -2.04
HINT3Q9NQE9 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
HINT3Q9NQE9 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.3□□□□□ -2.04
HINT3Q9NQE9 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.3□□□□□ -2.04
HINT3Q9NQE9 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.29□□□□□ -2.04
HINT3Q9NQE9 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
HINT3Q9NQE9 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.29□□□□□ -2.04
HINT3Q9NQE9 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.29□□□□□ -2.04
HINT3Q9NQE9 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
HINT3Q9NQE9 AC062016.1-201ENST00000355719 319 ntBASIC2.29□□□□□ -2.04
HINT3Q9NQE9 Y_RNA.5-201ENST00000362334 102 ntBASIC2.29□□□□□ -2.04
HINT3Q9NQE9 RNU6-137P-201ENST00000363680 108 ntBASIC2.29□□□□□ -2.04
HINT3Q9NQE9 Y_RNA.395-201ENST00000383945 109 ntBASIC2.29□□□□□ -2.04
HINT3Q9NQE9 RNU6-541P-201ENST00000384709 110 ntBASIC2.29□□□□□ -2.04
HINT3Q9NQE9 MIR549A-201ENST00000385268 96 ntBASIC2.29□□□□□ -2.04
HINT3Q9NQE9 MIR1294-201ENST00000408503 142 ntBASIC2.29□□□□□ -2.04
HINT3Q9NQE9 ARL5AP4-201ENST00000430731 512 ntBASIC2.29□□□□□ -2.04
HINT3Q9NQE9 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.29□□□□□ -2.04
HINT3Q9NQE9 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.29□□□□□ -2.04
HINT3Q9NQE9 AP000870.1-201ENST00000472927 406 ntBASIC2.29□□□□□ -2.04
HINT3Q9NQE9 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.29□□□□□ -2.04
HINT3Q9NQE9 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.29□□□□□ -2.04
HINT3Q9NQE9 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.29□□□□□ -2.04
HINT3Q9NQE9 Y_RNA.701-201ENST00000516812 110 ntBASIC2.29□□□□□ -2.04
HINT3Q9NQE9 RNA5SP54-201ENST00000516951 92 ntBASIC2.29□□□□□ -2.04
HINT3Q9NQE9 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.29□□□□□ -2.04
HINT3Q9NQE9 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.29□□□□□ -2.04
HINT3Q9NQE9 AC022616.8-201ENST00000533569 253 ntBASIC2.29□□□□□ -2.04
HINT3Q9NQE9 AC006023.1-201ENST00000603944 259 ntBASIC2.29□□□□□ -2.04
HINT3Q9NQE9 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.29□□□□□ -2.04
HINT3Q9NQE9 U4atac.1-201ENST00000618345 95 ntBASIC2.29□□□□□ -2.04
HINT3Q9NQE9 AC022140.2-201ENST00000623500 188 ntBASIC2.29□□□□□ -2.04
HINT3Q9NQE9 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
HINT3Q9NQE9 RNU6-222P-201ENST00000362438 107 ntBASIC2.28□□□□□ -2.04
HINT3Q9NQE9 RNU4-76P-201ENST00000364509 141 ntBASIC2.28□□□□□ -2.04
HINT3Q9NQE9 Y_RNA.364-201ENST00000365532 101 ntBASIC2.28□□□□□ -2.04
HINT3Q9NQE9 RNU6-26P-201ENST00000383985 107 ntBASIC2.28□□□□□ -2.04
HINT3Q9NQE9 MIR625-201ENST00000385047 85 ntBASIC2.28□□□□□ -2.04
HINT3Q9NQE9 RNU2-52P-201ENST00000410680 190 ntBASIC2.28□□□□□ -2.04
HINT3Q9NQE9 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.28□□□□□ -2.04
HINT3Q9NQE9 Z82209.1-201ENST00000422141 2135 ntBASIC2.28□□□□□ -2.04
HINT3Q9NQE9 MTCO2P12-201ENST00000427426 682 ntBASIC2.28□□□□□ -2.04
HINT3Q9NQE9 AC027124.2-201ENST00000428249 105 ntBASIC2.28□□□□□ -2.04
HINT3Q9NQE9 AC099799.1-201ENST00000439809 192 ntBASIC2.28□□□□□ -2.04
HINT3Q9NQE9 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.28□□□□□ -2.04
HINT3Q9NQE9 AL035666.1-201ENST00000446195 348 ntBASIC2.28□□□□□ -2.04
HINT3Q9NQE9 AC018868.1-201ENST00000491307 315 ntBASIC2.28□□□□□ -2.04
HINT3Q9NQE9 MIR449C-201ENST00000516047 92 ntBASIC2.28□□□□□ -2.04
HINT3Q9NQE9 RNU6-965P-201ENST00000516721 96 ntBASIC2.28□□□□□ -2.04
HINT3Q9NQE9 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.28□□□□□ -2.04
HINT3Q9NQE9 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.28□□□□□ -2.04
HINT3Q9NQE9 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.28□□□□□ -2.04
HINT3Q9NQE9 MIR6852-201ENST00000621699 66 ntBASIC2.28□□□□□ -2.04
HINT3Q9NQE9 uc_338.22-201ENST00000622722 187 ntBASIC2.28□□□□□ -2.04
HINT3Q9NQE9 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
HINT3Q9NQE9 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.28□□□□□ -2.04
HINT3Q9NQE9 BX322639.1-202ENST00000423987 2213 ntBASIC2.27□□□□□ -2.05
HINT3Q9NQE9 ZNF204P-201ENST00000416749 2397 ntBASIC2.27□□□□□ -2.05
HINT3Q9NQE9 Y_RNA.138-201ENST00000363462 102 ntBASIC2.27□□□□□ -2.05
HINT3Q9NQE9 RNU6-694P-201ENST00000364071 147 ntBASIC2.27□□□□□ -2.05
HINT3Q9NQE9 Y_RNA.252-201ENST00000364556 101 ntBASIC2.27□□□□□ -2.05
HINT3Q9NQE9 Y_RNA.314-201ENST00000365114 102 ntBASIC2.27□□□□□ -2.05
HINT3Q9NQE9 SNORA18.2-201ENST00000383865 132 ntBASIC2.27□□□□□ -2.05
HINT3Q9NQE9 Y_RNA.428-201ENST00000384078 102 ntBASIC2.27□□□□□ -2.05
HINT3Q9NQE9 RNU6-159P-201ENST00000391080 106 ntBASIC2.27□□□□□ -2.05
HINT3Q9NQE9 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.27□□□□□ -2.05
HINT3Q9NQE9 AC018865.2-201ENST00000423631 129 ntBASIC2.27□□□□□ -2.05
HINT3Q9NQE9 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.27□□□□□ -2.05
HINT3Q9NQE9 AL137792.2-201ENST00000443484 235 ntBASIC2.27□□□□□ -2.05
HINT3Q9NQE9 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.27□□□□□ -2.05
HINT3Q9NQE9 AL109933.2-201ENST00000452651 260 ntBASIC2.27□□□□□ -2.05
HINT3Q9NQE9 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.27□□□□□ -2.05
HINT3Q9NQE9 RNU7-87P-201ENST00000459343 62 ntBASIC2.27□□□□□ -2.05
HINT3Q9NQE9 AC132942.1-201ENST00000486753 483 ntBASIC2.27□□□□□ -2.05
HINT3Q9NQE9 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.27□□□□□ -2.05
HINT3Q9NQE9 ANXA2P1-201ENST00000505539 926 ntBASIC2.27□□□□□ -2.05
HINT3Q9NQE9 Y_RNA.661-201ENST00000516003 99 ntBASIC2.27□□□□□ -2.05
HINT3Q9NQE9 RNU7-4P-201ENST00000516961 62 ntBASIC2.27□□□□□ -2.05
HINT3Q9NQE9 SNORD116.3-201ENST00000517176 78 ntBASIC2.27□□□□□ -2.05
HINT3Q9NQE9 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.27□□□□□ -2.05
HINT3Q9NQE9 DEFB131C-201ENST00000528817 165 ntBASIC2.27□□□□□ -2.05
HINT3Q9NQE9 SNRPGP18-201ENST00000553000 214 ntBASIC2.27□□□□□ -2.05
HINT3Q9NQE9 AC026470.2-201ENST00000561492 181 ntBASIC2.27□□□□□ -2.05
HINT3Q9NQE9 MIR4658-201ENST00000584344 65 ntBASIC2.27□□□□□ -2.05
HINT3Q9NQE9 RPL12P50-201ENST00000603116 116 ntBASIC2.27□□□□□ -2.05
HINT3Q9NQE9 AL137847.3-201ENST00000611521 109 ntBASIC2.27□□□□□ -2.05
HINT3Q9NQE9 AC087588.2-201ENST00000617667 426 ntBASIC2.27□□□□□ -2.05
HINT3Q9NQE9 AC005562.2-201ENST00000618264 111 ntBASIC2.27□□□□□ -2.05
HINT3Q9NQE9 AC091925.1-201ENST00000623204 462 ntBASIC2.27□□□□□ -2.05
HINT3Q9NQE9 MTND5P16-201ENST00000460269 1703 ntBASIC2.27□□□□□ -2.05
HINT3Q9NQE9 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.26□□□□□ -2.05
HINT3Q9NQE9 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
HINT3Q9NQE9 Y_RNA.112-201ENST00000363250 102 ntBASIC2.26□□□□□ -2.05
HINT3Q9NQE9 Y_RNA.445-201ENST00000384168 102 ntBASIC2.26□□□□□ -2.05
HINT3Q9NQE9 RNU6-474P-201ENST00000384243 107 ntBASIC2.26□□□□□ -2.05
HINT3Q9NQE9 Y_RNA.496-201ENST00000384444 101 ntBASIC2.26□□□□□ -2.05
HINT3Q9NQE9 RNU2-48P-201ENST00000410694 191 ntBASIC2.26□□□□□ -2.05
HINT3Q9NQE9 AL354751.2-201ENST00000415471 210 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms