Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AC096638.1-201ENST00000444678 216 ntBASIC3.19□□□□□ -1.9
VTA1Q9NP79 AP000705.1-201ENST00000454567 350 ntBASIC3.19□□□□□ -1.9
VTA1Q9NP79 AP000870.1-201ENST00000472927 406 ntBASIC3.19□□□□□ -1.9
VTA1Q9NP79 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.19□□□□□ -1.9
VTA1Q9NP79 AC113195.1-201ENST00000579952 141 ntBASIC3.19□□□□□ -1.9
VTA1Q9NP79 AC078899.3-201ENST00000599065 212 ntBASIC3.19□□□□□ -1.9
VTA1Q9NP79 AL390123.1-201ENST00000603216 237 ntBASIC3.19□□□□□ -1.9
VTA1Q9NP79 PRR13P7-201ENST00000605538 430 ntBASIC3.19□□□□□ -1.9
VTA1Q9NP79 AC069294.1-201ENST00000608397 350 ntBASIC3.19□□□□□ -1.9
VTA1Q9NP79 AL021879.1-201ENST00000611756 288 ntBASIC3.19□□□□□ -1.9
VTA1Q9NP79 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.19□□□□□ -1.9
VTA1Q9NP79 AL449363.1-201ENST00000617815 186 ntBASIC3.19□□□□□ -1.9
VTA1Q9NP79 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
VTA1Q9NP79 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
VTA1Q9NP79 RNU4-15P-201ENST00000362613 141 ntBASIC3.18□□□□□ -1.9
VTA1Q9NP79 Y_RNA.276-201ENST00000364732 109 ntBASIC3.18□□□□□ -1.9
VTA1Q9NP79 Y_RNA.527-201ENST00000384573 102 ntBASIC3.18□□□□□ -1.9
VTA1Q9NP79 SNORA46-201ENST00000384762 135 ntBASIC3.18□□□□□ -1.9
VTA1Q9NP79 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.18□□□□□ -1.9
VTA1Q9NP79 RPS15AP7-201ENST00000439294 405 ntBASIC3.18□□□□□ -1.9
VTA1Q9NP79 RPL23AP58-201ENST00000440453 469 ntBASIC3.18□□□□□ -1.9
VTA1Q9NP79 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.18□□□□□ -1.9
VTA1Q9NP79 AC073910.1-201ENST00000445047 438 ntBASIC3.18□□□□□ -1.9
VTA1Q9NP79 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC3.18□□□□□ -1.9
VTA1Q9NP79 RNU6-1137P-201ENST00000517073 99 ntBASIC3.18□□□□□ -1.9
VTA1Q9NP79 AC007536.1-201ENST00000533382 349 ntBASIC3.18□□□□□ -1.9
VTA1Q9NP79 HSPE1P20-201ENST00000538133 289 ntBASIC3.18□□□□□ -1.9
VTA1Q9NP79 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.18□□□□□ -1.9
VTA1Q9NP79 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.18□□□□□ -1.9
VTA1Q9NP79 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.18□□□□□ -1.9
VTA1Q9NP79 AL121655.1-201ENST00000605811 308 ntBASIC3.18□□□□□ -1.9
VTA1Q9NP79 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.18□□□□□ -1.9
VTA1Q9NP79 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.17□□□□□ -1.9
VTA1Q9NP79 RNU6-859P-201ENST00000362728 107 ntBASIC3.17□□□□□ -1.9
VTA1Q9NP79 Y_RNA.485-201ENST00000384395 102 ntBASIC3.17□□□□□ -1.9
VTA1Q9NP79 RNA5SP213-201ENST00000391031 106 ntBASIC3.17□□□□□ -1.9
VTA1Q9NP79 RPL21P3-201ENST00000395517 478 ntBASIC3.17□□□□□ -1.9
VTA1Q9NP79 RNU2-52P-201ENST00000410680 190 ntBASIC3.17□□□□□ -1.9
VTA1Q9NP79 RNA5SP21-201ENST00000410917 96 ntBASIC3.17□□□□□ -1.9
VTA1Q9NP79 RNA5SP344-201ENST00000411081 104 ntBASIC3.17□□□□□ -1.9
VTA1Q9NP79 HMGB3P2-201ENST00000411913 584 ntBASIC3.17□□□□□ -1.9
VTA1Q9NP79 SDAD1P3-201ENST00000427380 333 ntBASIC3.17□□□□□ -1.9
VTA1Q9NP79 AC096644.2-201ENST00000429278 159 ntBASIC3.17□□□□□ -1.9
VTA1Q9NP79 CYP2C59P-201ENST00000457790 269 ntBASIC3.17□□□□□ -1.9
VTA1Q9NP79 snoU13.6-201ENST00000458785 104 ntBASIC3.17□□□□□ -1.9
VTA1Q9NP79 AC146507.2-201ENST00000460608 476 ntBASIC3.17□□□□□ -1.9
VTA1Q9NP79 Y_RNA.715-201ENST00000517082 110 ntBASIC3.17□□□□□ -1.9
VTA1Q9NP79 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.17□□□□□ -1.9
VTA1Q9NP79 COX6CP5-201ENST00000527162 228 ntBASIC3.17□□□□□ -1.9
VTA1Q9NP79 AL117187.1-201ENST00000555482 181 ntBASIC3.17□□□□□ -1.9
VTA1Q9NP79 AC105245.1-201ENST00000581934 244 ntBASIC3.17□□□□□ -1.9
VTA1Q9NP79 AC005296.1-201ENST00000616145 209 ntBASIC3.17□□□□□ -1.9
VTA1Q9NP79 AC008121.3-201ENST00000618726 433 ntBASIC3.17□□□□□ -1.9
VTA1Q9NP79 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
VTA1Q9NP79 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
VTA1Q9NP79 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.16□□□□□ -1.9
VTA1Q9NP79 RNU4-82P-201ENST00000362443 140 ntBASIC3.16□□□□□ -1.9
VTA1Q9NP79 RNY3P11-201ENST00000364153 102 ntBASIC3.16□□□□□ -1.9
VTA1Q9NP79 SNORA51.4-201ENST00000364993 124 ntBASIC3.16□□□□□ -1.9
VTA1Q9NP79 SNORA51.11-201ENST00000384442 131 ntBASIC3.16□□□□□ -1.9
VTA1Q9NP79 MIR196B-201ENST00000384852 84 ntBASIC3.16□□□□□ -1.9
VTA1Q9NP79 MIR10B-201ENST00000385011 110 ntBASIC3.16□□□□□ -1.9
VTA1Q9NP79 RN7SKP58-201ENST00000411010 305 ntBASIC3.16□□□□□ -1.9
VTA1Q9NP79 AC113618.1-201ENST00000416747 285 ntBASIC3.16□□□□□ -1.9
VTA1Q9NP79 CBX3P6-201ENST00000430257 527 ntBASIC3.16□□□□□ -1.9
VTA1Q9NP79 AC112220.1-201ENST00000434628 355 ntBASIC3.16□□□□□ -1.9
VTA1Q9NP79 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.16□□□□□ -1.9
VTA1Q9NP79 AC073901.1-201ENST00000462471 408 ntBASIC3.16□□□□□ -1.9
VTA1Q9NP79 AC145146.1-201ENST00000496370 254 ntBASIC3.16□□□□□ -1.9
VTA1Q9NP79 RNU6-1143P-201ENST00000516125 104 ntBASIC3.16□□□□□ -1.9
VTA1Q9NP79 RN7SKP49-201ENST00000516675 260 ntBASIC3.16□□□□□ -1.9
VTA1Q9NP79 AC022868.1-201ENST00000517767 391 ntBASIC3.16□□□□□ -1.9
VTA1Q9NP79 AC034114.1-201ENST00000520293 285 ntBASIC3.16□□□□□ -1.9
VTA1Q9NP79 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.16□□□□□ -1.9
VTA1Q9NP79 AC010205.1-201ENST00000616668 449 ntBASIC3.16□□□□□ -1.9
VTA1Q9NP79 MIR5739-201ENST00000619803 80 ntBASIC3.16□□□□□ -1.9
VTA1Q9NP79 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
VTA1Q9NP79 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
VTA1Q9NP79 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
VTA1Q9NP79 RNU1-62P-201ENST00000362599 164 ntBASIC3.15□□□□□ -1.91
VTA1Q9NP79 RNU1-112P-201ENST00000364401 164 ntBASIC3.15□□□□□ -1.91
VTA1Q9NP79 U8.9-201ENST00000365667 134 ntBASIC3.15□□□□□ -1.91
VTA1Q9NP79 RNU6-281P-201ENST00000384212 103 ntBASIC3.15□□□□□ -1.91
VTA1Q9NP79 SNORD78.2-201ENST00000391076 69 ntBASIC3.15□□□□□ -1.91
VTA1Q9NP79 Z82209.1-201ENST00000422141 2135 ntBASIC3.15□□□□□ -1.91
VTA1Q9NP79 AL358176.2-201ENST00000425769 204 ntBASIC3.15□□□□□ -1.91
VTA1Q9NP79 RPL30P4-201ENST00000429309 333 ntBASIC3.15□□□□□ -1.91
VTA1Q9NP79 UQCRHP3-201ENST00000451503 251 ntBASIC3.15□□□□□ -1.91
VTA1Q9NP79 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.15□□□□□ -1.91
VTA1Q9NP79 RN7SKP282-201ENST00000516824 299 ntBASIC3.15□□□□□ -1.91
VTA1Q9NP79 SNORA31.26-201ENST00000517250 137 ntBASIC3.15□□□□□ -1.91
VTA1Q9NP79 IGHVIII-44-202ENST00000636235 289 ntBASIC3.15□□□□□ -1.91
VTA1Q9NP79 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
VTA1Q9NP79 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.15□□□□□ -1.91
VTA1Q9NP79 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
VTA1Q9NP79 RNU6-1301P-201ENST00000362724 104 ntBASIC3.14□□□□□ -1.91
VTA1Q9NP79 RNA5SP240-201ENST00000365355 128 ntBASIC3.14□□□□□ -1.91
VTA1Q9NP79 Y_RNA.471-201ENST00000384312 102 ntBASIC3.14□□□□□ -1.91
VTA1Q9NP79 RNU6-378P-201ENST00000384324 107 ntBASIC3.14□□□□□ -1.91
VTA1Q9NP79 MIR512-1-201ENST00000384913 84 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 158.4 ms