Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 Y_RNA.293-201ENST00000364908 93 ntBASIC3.58□□□□□ -1.84
SSU72Q9NP77 SNORD20-201ENST00000384550 80 ntBASIC3.58□□□□□ -1.84
SSU72Q9NP77 U8.12-201ENST00000384701 133 ntBASIC3.58□□□□□ -1.84
SSU72Q9NP77 SNORA48.5-201ENST00000391143 135 ntBASIC3.58□□□□□ -1.84
SSU72Q9NP77 AC093578.1-201ENST00000415219 368 ntBASIC3.58□□□□□ -1.84
SSU72Q9NP77 AL445584.1-201ENST00000431451 330 ntBASIC3.58□□□□□ -1.84
SSU72Q9NP77 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.58□□□□□ -1.84
SSU72Q9NP77 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.58□□□□□ -1.84
SSU72Q9NP77 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.58□□□□□ -1.84
SSU72Q9NP77 AC006463.2-201ENST00000473326 348 ntBASIC3.58□□□□□ -1.84
SSU72Q9NP77 RN7SL442P-201ENST00000473804 320 ntBASIC3.58□□□□□ -1.84
SSU72Q9NP77 RNU6-971P-201ENST00000516920 106 ntBASIC3.58□□□□□ -1.84
SSU72Q9NP77 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.58□□□□□ -1.84
SSU72Q9NP77 MIR4277-201ENST00000578298 84 ntBASIC3.58□□□□□ -1.84
SSU72Q9NP77 MIR4700-201ENST00000578311 74 ntBASIC3.58□□□□□ -1.84
SSU72Q9NP77 AC024940.4-201ENST00000605507 246 ntBASIC3.58□□□□□ -1.84
SSU72Q9NP77 MIR6867-201ENST00000610636 67 ntBASIC3.58□□□□□ -1.84
SSU72Q9NP77 MIR492-201ENST00000638676 116 ntBASIC3.58□□□□□ -1.84
SSU72Q9NP77 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SSU72Q9NP77 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.58□□□□□ -1.84
SSU72Q9NP77 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
SSU72Q9NP77 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SSU72Q9NP77 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SSU72Q9NP77 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.57□□□□□ -1.84
SSU72Q9NP77 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
SSU72Q9NP77 Y_RNA.172-201ENST00000363765 102 ntBASIC3.57□□□□□ -1.84
SSU72Q9NP77 RNU6-1210P-201ENST00000363775 107 ntBASIC3.57□□□□□ -1.84
SSU72Q9NP77 SNORA73.2-201ENST00000364946 201 ntBASIC3.57□□□□□ -1.84
SSU72Q9NP77 SNORA20-201ENST00000384662 132 ntBASIC3.57□□□□□ -1.84
SSU72Q9NP77 SNORA40-201ENST00000388090 126 ntBASIC3.57□□□□□ -1.84
SSU72Q9NP77 SNORA12-201ENST00000391162 147 ntBASIC3.57□□□□□ -1.84
SSU72Q9NP77 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.57□□□□□ -1.84
SSU72Q9NP77 TOMM22P2-201ENST00000430735 237 ntBASIC3.57□□□□□ -1.84
SSU72Q9NP77 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.57□□□□□ -1.84
SSU72Q9NP77 AC008267.6-201ENST00000441664 139 ntBASIC3.57□□□□□ -1.84
SSU72Q9NP77 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.57□□□□□ -1.84
SSU72Q9NP77 AL137159.1-201ENST00000452808 512 ntBASIC3.57□□□□□ -1.84
SSU72Q9NP77 AC114982.1-201ENST00000469402 321 ntBASIC3.57□□□□□ -1.84
SSU72Q9NP77 RPL30P14-201ENST00000482744 348 ntBASIC3.57□□□□□ -1.84
SSU72Q9NP77 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.57□□□□□ -1.84
SSU72Q9NP77 SNORA25.12-201ENST00000516202 82 ntBASIC3.57□□□□□ -1.84
SSU72Q9NP77 SNORA70.19-201ENST00000516717 90 ntBASIC3.57□□□□□ -1.84
SSU72Q9NP77 MIR2276-201ENST00000516886 89 ntBASIC3.57□□□□□ -1.84
SSU72Q9NP77 DNAJC19P2-201ENST00000593340 302 ntBASIC3.57□□□□□ -1.84
SSU72Q9NP77 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.57□□□□□ -1.84
SSU72Q9NP77 MIR6500-201ENST00000622700 86 ntBASIC3.57□□□□□ -1.84
SSU72Q9NP77 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.57□□□□□ -1.84
SSU72Q9NP77 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.57□□□□□ -1.84
SSU72Q9NP77 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.57□□□□□ -1.84
SSU72Q9NP77 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
SSU72Q9NP77 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SSU72Q9NP77 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SSU72Q9NP77 AP003122.5-201ENST00000527668 3766 ntBASIC3.56□□□□□ -1.84
SSU72Q9NP77 AL513302.2-201ENST00000562313 1842 ntBASIC3.56□□□□□ -1.84
SSU72Q9NP77 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
SSU72Q9NP77 U3.8-201ENST00000363675 217 ntBASIC3.56□□□□□ -1.84
SSU72Q9NP77 Y_RNA.341-201ENST00000365341 102 ntBASIC3.56□□□□□ -1.84
SSU72Q9NP77 RNU6-969P-201ENST00000383900 105 ntBASIC3.56□□□□□ -1.84
SSU72Q9NP77 Y_RNA.456-201ENST00000384232 111 ntBASIC3.56□□□□□ -1.84
SSU72Q9NP77 MIR616-201ENST00000385293 97 ntBASIC3.56□□□□□ -1.84
SSU72Q9NP77 MT-TT-201ENST00000387460 66 ntBASIC3.56□□□□□ -1.84
SSU72Q9NP77 RNU6-855P-201ENST00000410395 104 ntBASIC3.56□□□□□ -1.84
SSU72Q9NP77 RNU6-710P-201ENST00000410424 105 ntBASIC3.56□□□□□ -1.84
SSU72Q9NP77 RNU7-197P-201ENST00000458836 62 ntBASIC3.56□□□□□ -1.84
SSU72Q9NP77 RNU7-141P-201ENST00000459304 62 ntBASIC3.56□□□□□ -1.84
SSU72Q9NP77 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.56□□□□□ -1.84
SSU72Q9NP77 RNU6-561P-201ENST00000516222 102 ntBASIC3.56□□□□□ -1.84
SSU72Q9NP77 ARF4P1-201ENST00000605447 541 ntBASIC3.56□□□□□ -1.84
SSU72Q9NP77 MIR6820-201ENST00000611508 62 ntBASIC3.56□□□□□ -1.84
SSU72Q9NP77 Y_RNA.802-201ENST00000614892 130 ntBASIC3.56□□□□□ -1.84
SSU72Q9NP77 uc_338.32-201ENST00000615087 172 ntBASIC3.56□□□□□ -1.84
SSU72Q9NP77 AC002076.2-201ENST00000617362 122 ntBASIC3.56□□□□□ -1.84
SSU72Q9NP77 AC008873.1-201ENST00000625051 138 ntBASIC3.56□□□□□ -1.84
SSU72Q9NP77 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SSU72Q9NP77 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
SSU72Q9NP77 snoU2_19.1-201ENST00000362361 80 ntBASIC3.55□□□□□ -1.84
SSU72Q9NP77 Y_RNA.71-201ENST00000362892 104 ntBASIC3.55□□□□□ -1.84
SSU72Q9NP77 RNU6-215P-201ENST00000365169 102 ntBASIC3.55□□□□□ -1.84
SSU72Q9NP77 MIR526A2-201ENST00000390198 65 ntBASIC3.55□□□□□ -1.84
SSU72Q9NP77 RPL21P65-201ENST00000406094 466 ntBASIC3.55□□□□□ -1.84
SSU72Q9NP77 AC006445.1-201ENST00000491925 405 ntBASIC3.55□□□□□ -1.84
SSU72Q9NP77 AC107027.2-201ENST00000512197 115 ntBASIC3.55□□□□□ -1.84
SSU72Q9NP77 CYCSP30-201ENST00000546447 172 ntBASIC3.55□□□□□ -1.84
SSU72Q9NP77 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC3.55□□□□□ -1.84
SSU72Q9NP77 AL138880.2-201ENST00000616214 239 ntBASIC3.55□□□□□ -1.84
SSU72Q9NP77 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.55□□□□□ -1.84
SSU72Q9NP77 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
SSU72Q9NP77 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SSU72Q9NP77 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SSU72Q9NP77 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
SSU72Q9NP77 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.54□□□□□ -1.84
SSU72Q9NP77 AC069528.2-201ENST00000624849 1991 ntBASIC3.54□□□□□ -1.84
SSU72Q9NP77 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
SSU72Q9NP77 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
SSU72Q9NP77 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
SSU72Q9NP77 RNU6-655P-201ENST00000362858 107 ntBASIC3.54□□□□□ -1.84
SSU72Q9NP77 Y_RNA.127-201ENST00000363386 109 ntBASIC3.54□□□□□ -1.84
SSU72Q9NP77 Y_RNA.353-201ENST00000365440 108 ntBASIC3.54□□□□□ -1.84
SSU72Q9NP77 MIR585-201ENST00000384887 94 ntBASIC3.54□□□□□ -1.84
SSU72Q9NP77 MIR147B-201ENST00000390185 80 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 128.4 ms