Protein–RNA interactions for Protein: Q9H9S0

NANOG, Homeobox protein NANOG, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGQ9H9S0 RNU1-148P-201ENST00000384472 162 ntBASIC1.63□□□□□ -2.15
NANOGQ9H9S0 MIR521-1-201ENST00000384902 87 ntBASIC1.63□□□□□ -2.15
NANOGQ9H9S0 MIR676-201ENST00000390702 67 ntBASIC1.63□□□□□ -2.15
NANOGQ9H9S0 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
NANOGQ9H9S0 MIR548F5-201ENST00000408421 86 ntBASIC1.63□□□□□ -2.15
NANOGQ9H9S0 RN7SKP61-201ENST00000410642 295 ntBASIC1.63□□□□□ -2.15
NANOGQ9H9S0 RNU6-1245P-201ENST00000411130 106 ntBASIC1.63□□□□□ -2.15
NANOGQ9H9S0 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.63□□□□□ -2.15
NANOGQ9H9S0 AL161788.1-201ENST00000441805 169 ntBASIC1.63□□□□□ -2.15
NANOGQ9H9S0 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.63□□□□□ -2.15
NANOGQ9H9S0 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.63□□□□□ -2.15
NANOGQ9H9S0 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.63□□□□□ -2.15
NANOGQ9H9S0 MTCO1P29-201ENST00000496868 288 ntBASIC1.63□□□□□ -2.15
NANOGQ9H9S0 AC021146.2-201ENST00000504736 556 ntBASIC1.63□□□□□ -2.15
NANOGQ9H9S0 MRPS17P9-201ENST00000511924 393 ntBASIC1.63□□□□□ -2.15
NANOGQ9H9S0 RNA5SP182-201ENST00000516064 82 ntBASIC1.63□□□□□ -2.15
NANOGQ9H9S0 RNU6-965P-201ENST00000516721 96 ntBASIC1.63□□□□□ -2.15
NANOGQ9H9S0 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.63□□□□□ -2.15
NANOGQ9H9S0 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.63□□□□□ -2.15
NANOGQ9H9S0 MIR4287-201ENST00000579398 78 ntBASIC1.63□□□□□ -2.15
NANOGQ9H9S0 AC011712.1-201ENST00000588959 234 ntBASIC1.63□□□□□ -2.15
NANOGQ9H9S0 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.63□□□□□ -2.15
NANOGQ9H9S0 AL034555.1-201ENST00000604816 211 ntBASIC1.63□□□□□ -2.15
NANOGQ9H9S0 RNU6-845P-201ENST00000362578 103 ntBASIC1.62□□□□□ -2.15
NANOGQ9H9S0 SNORD81.2-201ENST00000365153 76 ntBASIC1.62□□□□□ -2.15
NANOGQ9H9S0 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.62□□□□□ -2.15
NANOGQ9H9S0 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.62□□□□□ -2.15
NANOGQ9H9S0 SNORA29-201ENST00000384183 140 ntBASIC1.62□□□□□ -2.15
NANOGQ9H9S0 RNU6-378P-201ENST00000384324 107 ntBASIC1.62□□□□□ -2.15
NANOGQ9H9S0 MIR517A-201ENST00000385001 87 ntBASIC1.62□□□□□ -2.15
NANOGQ9H9S0 MIR548K-201ENST00000408406 116 ntBASIC1.62□□□□□ -2.15
NANOGQ9H9S0 RN7SKP158-201ENST00000410453 326 ntBASIC1.62□□□□□ -2.15
NANOGQ9H9S0 Y_RNA.597-201ENST00000410463 100 ntBASIC1.62□□□□□ -2.15
NANOGQ9H9S0 AC009161.1-201ENST00000417306 376 ntBASIC1.62□□□□□ -2.15
NANOGQ9H9S0 RPL21P111-201ENST00000418453 477 ntBASIC1.62□□□□□ -2.15
NANOGQ9H9S0 USP9YP30-201ENST00000430729 455 ntBASIC1.62□□□□□ -2.15
NANOGQ9H9S0 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.62□□□□□ -2.15
NANOGQ9H9S0 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.62□□□□□ -2.15
NANOGQ9H9S0 AC079354.2-201ENST00000453523 154 ntBASIC1.62□□□□□ -2.15
NANOGQ9H9S0 FO393415.2-201ENST00000480085 343 ntBASIC1.62□□□□□ -2.15
NANOGQ9H9S0 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.62□□□□□ -2.15
NANOGQ9H9S0 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.62□□□□□ -2.15
NANOGQ9H9S0 AF186996.7-201ENST00000492781 209 ntBASIC1.62□□□□□ -2.15
NANOGQ9H9S0 AC145146.1-201ENST00000496370 254 ntBASIC1.62□□□□□ -2.15
NANOGQ9H9S0 AC103851.1-201ENST00000506833 274 ntBASIC1.62□□□□□ -2.15
NANOGQ9H9S0 RNU6-586P-201ENST00000517265 104 ntBASIC1.62□□□□□ -2.15
NANOGQ9H9S0 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.62□□□□□ -2.15
NANOGQ9H9S0 AC118273.2-201ENST00000532092 465 ntBASIC1.62□□□□□ -2.15
NANOGQ9H9S0 AC110588.1-201ENST00000559699 137 ntBASIC1.62□□□□□ -2.15
NANOGQ9H9S0 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.62□□□□□ -2.15
NANOGQ9H9S0 AL109918.3-201ENST00000603072 338 ntBASIC1.62□□□□□ -2.15
NANOGQ9H9S0 Z98751.3-201ENST00000604447 521 ntBASIC1.62□□□□□ -2.15
NANOGQ9H9S0 AL355297.2-201ENST00000604792 129 ntBASIC1.62□□□□□ -2.15
NANOGQ9H9S0 AC018889.1-201ENST00000605372 397 ntBASIC1.62□□□□□ -2.15
NANOGQ9H9S0 AC093913.1-201ENST00000614178 329 ntBASIC1.62□□□□□ -2.15
NANOGQ9H9S0 MIR5739-201ENST00000619803 80 ntBASIC1.62□□□□□ -2.15
NANOGQ9H9S0 AL359757.2-201ENST00000624309 274 ntBASIC1.62□□□□□ -2.15
NANOGQ9H9S0 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
NANOGQ9H9S0 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
NANOGQ9H9S0 Y_RNA.48-201ENST00000362710 103 ntBASIC1.61□□□□□ -2.15
NANOGQ9H9S0 Y_RNA.72-201ENST00000362894 103 ntBASIC1.61□□□□□ -2.15
NANOGQ9H9S0 SNORD32B-201ENST00000364460 84 ntBASIC1.61□□□□□ -2.15
NANOGQ9H9S0 RNU6-767P-201ENST00000384132 107 ntBASIC1.61□□□□□ -2.15
NANOGQ9H9S0 MIR1289-2-201ENST00000408360 111 ntBASIC1.61□□□□□ -2.15
NANOGQ9H9S0 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.61□□□□□ -2.15
NANOGQ9H9S0 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.61□□□□□ -2.15
NANOGQ9H9S0 AC116337.1-201ENST00000509680 687 ntBASIC1.61□□□□□ -2.15
NANOGQ9H9S0 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.61□□□□□ -2.15
NANOGQ9H9S0 RNU6-507P-201ENST00000516045 100 ntBASIC1.61□□□□□ -2.15
NANOGQ9H9S0 RNU6-548P-201ENST00000517083 115 ntBASIC1.61□□□□□ -2.15
NANOGQ9H9S0 DEFB131C-201ENST00000528817 165 ntBASIC1.61□□□□□ -2.15
NANOGQ9H9S0 MIR4790-201ENST00000577799 79 ntBASIC1.61□□□□□ -2.15
NANOGQ9H9S0 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.61□□□□□ -2.15
NANOGQ9H9S0 MIR4801-201ENST00000582704 82 ntBASIC1.61□□□□□ -2.15
NANOGQ9H9S0 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.61□□□□□ -2.15
NANOGQ9H9S0 MIR8076-201ENST00000611401 83 ntBASIC1.61□□□□□ -2.15
NANOGQ9H9S0 AL132822.1-201ENST00000617063 513 ntBASIC1.61□□□□□ -2.15
NANOGQ9H9S0 AC022306.2-201ENST00000617563 647 ntBASIC1.61□□□□□ -2.15
NANOGQ9H9S0 MIR1248-201ENST00000629190 106 ntBASIC1.61□□□□□ -2.15
NANOGQ9H9S0 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.61□□□□□ -2.15
NANOGQ9H9S0 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
NANOGQ9H9S0 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
NANOGQ9H9S0 AL356292.1-201ENST00000283110 373 ntBASIC1.6□□□□□ -2.15
NANOGQ9H9S0 RNU5B-2P-201ENST00000363036 113 ntBASIC1.6□□□□□ -2.15
NANOGQ9H9S0 SNORA25B-201ENST00000365507 128 ntBASIC1.6□□□□□ -2.15
NANOGQ9H9S0 AL356432.1-201ENST00000405809 419 ntBASIC1.6□□□□□ -2.15
NANOGQ9H9S0 RNA5SP201-201ENST00000410316 124 ntBASIC1.6□□□□□ -2.15
NANOGQ9H9S0 RNU6-1304P-201ENST00000411374 106 ntBASIC1.6□□□□□ -2.15
NANOGQ9H9S0 AC078809.1-201ENST00000427601 140 ntBASIC1.6□□□□□ -2.15
NANOGQ9H9S0 RPS3AP52-201ENST00000435639 297 ntBASIC1.6□□□□□ -2.15
NANOGQ9H9S0 Z82188.1-201ENST00000436709 154 ntBASIC1.6□□□□□ -2.15
NANOGQ9H9S0 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.6□□□□□ -2.15
NANOGQ9H9S0 MTND4LP16-201ENST00000440828 295 ntBASIC1.6□□□□□ -2.15
NANOGQ9H9S0 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.6□□□□□ -2.15
NANOGQ9H9S0 PCMTD1P1-201ENST00000455560 355 ntBASIC1.6□□□□□ -2.15
NANOGQ9H9S0 PRDX4P1-201ENST00000507189 574 ntBASIC1.6□□□□□ -2.15
NANOGQ9H9S0 AC026782.1-201ENST00000512952 449 ntBASIC1.6□□□□□ -2.15
NANOGQ9H9S0 SNORA4.4-201ENST00000515921 135 ntBASIC1.6□□□□□ -2.15
NANOGQ9H9S0 RNU6-295P-201ENST00000516901 104 ntBASIC1.6□□□□□ -2.15
NANOGQ9H9S0 SNORA48.11-201ENST00000517015 89 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 164 ms