Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 AC104332.2-201ENST00000429959 156 ntBASIC2.79□□□□□ -1.96
EBF3Q9H4W6 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.79□□□□□ -1.96
EBF3Q9H4W6 Z82188.1-201ENST00000436709 154 ntBASIC2.79□□□□□ -1.96
EBF3Q9H4W6 AC098831.1-201ENST00000440661 216 ntBASIC2.79□□□□□ -1.96
EBF3Q9H4W6 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
EBF3Q9H4W6 AK3P2-201ENST00000507976 429 ntBASIC2.79□□□□□ -1.96
EBF3Q9H4W6 AC096725.1-201ENST00000514266 313 ntBASIC2.79□□□□□ -1.96
EBF3Q9H4W6 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.79□□□□□ -1.96
EBF3Q9H4W6 AC004486.1-201ENST00000546846 233 ntBASIC2.79□□□□□ -1.96
EBF3Q9H4W6 MIR3609-201ENST00000582661 80 ntBASIC2.79□□□□□ -1.96
EBF3Q9H4W6 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.79□□□□□ -1.96
EBF3Q9H4W6 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.79□□□□□ -1.96
EBF3Q9H4W6 U4.7-201ENST00000638126 106 ntBASIC2.79□□□□□ -1.96
EBF3Q9H4W6 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
EBF3Q9H4W6 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
EBF3Q9H4W6 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.78□□□□□ -1.96
EBF3Q9H4W6 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.78□□□□□ -1.96
EBF3Q9H4W6 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
EBF3Q9H4W6 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
EBF3Q9H4W6 RNU6-884P-201ENST00000363889 107 ntBASIC2.78□□□□□ -1.96
EBF3Q9H4W6 RNU6-280P-201ENST00000364145 104 ntBASIC2.78□□□□□ -1.96
EBF3Q9H4W6 RNU6-336P-201ENST00000364891 107 ntBASIC2.78□□□□□ -1.96
EBF3Q9H4W6 Y_RNA.297-201ENST00000364950 91 ntBASIC2.78□□□□□ -1.96
EBF3Q9H4W6 MRPL35P1-201ENST00000404272 572 ntBASIC2.78□□□□□ -1.96
EBF3Q9H4W6 U3.37-201ENST00000408528 213 ntBASIC2.78□□□□□ -1.96
EBF3Q9H4W6 AL139156.1-201ENST00000412785 841 ntBASIC2.78□□□□□ -1.96
EBF3Q9H4W6 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.78□□□□□ -1.96
EBF3Q9H4W6 AL513328.1-201ENST00000446460 224 ntBASIC2.78□□□□□ -1.96
EBF3Q9H4W6 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.78□□□□□ -1.96
EBF3Q9H4W6 RPS3P1-201ENST00000456781 192 ntBASIC2.78□□□□□ -1.96
EBF3Q9H4W6 snoU109.2-201ENST00000459316 135 ntBASIC2.78□□□□□ -1.96
EBF3Q9H4W6 AC003982.1-202ENST00000469928 248 ntBASIC2.78□□□□□ -1.96
EBF3Q9H4W6 RNU6-1338P-201ENST00000516328 91 ntBASIC2.78□□□□□ -1.96
EBF3Q9H4W6 RNA5SP148-201ENST00000516527 94 ntBASIC2.78□□□□□ -1.96
EBF3Q9H4W6 AP002770.2-201ENST00000543613 532 ntBASIC2.78□□□□□ -1.96
EBF3Q9H4W6 AC091544.4-201ENST00000555268 342 ntBASIC2.78□□□□□ -1.96
EBF3Q9H4W6 AC090115.4-201ENST00000609970 188 ntBASIC2.78□□□□□ -1.96
EBF3Q9H4W6 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.78□□□□□ -1.96
EBF3Q9H4W6 MIR376A1-201ENST00000616574 68 ntBASIC2.78□□□□□ -1.96
EBF3Q9H4W6 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.78□□□□□ -1.96
EBF3Q9H4W6 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
EBF3Q9H4W6 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
EBF3Q9H4W6 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.77□□□□□ -1.97
EBF3Q9H4W6 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
EBF3Q9H4W6 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.77□□□□□ -1.97
EBF3Q9H4W6 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.77□□□□□ -1.97
EBF3Q9H4W6 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
EBF3Q9H4W6 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
EBF3Q9H4W6 Y_RNA.54-201ENST00000362766 105 ntBASIC2.77□□□□□ -1.97
EBF3Q9H4W6 Y_RNA.123-201ENST00000363338 102 ntBASIC2.77□□□□□ -1.97
EBF3Q9H4W6 SNORA25.6-201ENST00000364121 118 ntBASIC2.77□□□□□ -1.97
EBF3Q9H4W6 SNORA14A-201ENST00000364773 135 ntBASIC2.77□□□□□ -1.97
EBF3Q9H4W6 RNU5E-7P-201ENST00000365290 117 ntBASIC2.77□□□□□ -1.97
EBF3Q9H4W6 RNU6-886P-201ENST00000384319 105 ntBASIC2.77□□□□□ -1.97
EBF3Q9H4W6 RNU6-102P-201ENST00000384485 104 ntBASIC2.77□□□□□ -1.97
EBF3Q9H4W6 RNU6-658P-201ENST00000384606 106 ntBASIC2.77□□□□□ -1.97
EBF3Q9H4W6 AL079342.1-201ENST00000401460 267 ntBASIC2.77□□□□□ -1.97
EBF3Q9H4W6 RPS29P13-201ENST00000402041 169 ntBASIC2.77□□□□□ -1.97
EBF3Q9H4W6 AC096920.1-201ENST00000423991 241 ntBASIC2.77□□□□□ -1.97
EBF3Q9H4W6 AC112220.1-201ENST00000434628 355 ntBASIC2.77□□□□□ -1.97
EBF3Q9H4W6 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.77□□□□□ -1.97
EBF3Q9H4W6 TRBV12-1-201ENST00000479785 344 ntBASIC2.77□□□□□ -1.97
EBF3Q9H4W6 RNU6-377P-201ENST00000515965 102 ntBASIC2.77□□□□□ -1.97
EBF3Q9H4W6 Y_RNA.700-201ENST00000516806 100 ntBASIC2.77□□□□□ -1.97
EBF3Q9H4W6 RNU6-928P-201ENST00000516876 104 ntBASIC2.77□□□□□ -1.97
EBF3Q9H4W6 NACAP3-201ENST00000552100 481 ntBASIC2.77□□□□□ -1.97
EBF3Q9H4W6 AC104581.2-201ENST00000572227 430 ntBASIC2.77□□□□□ -1.97
EBF3Q9H4W6 MIR3670-2-201ENST00000582974 65 ntBASIC2.77□□□□□ -1.97
EBF3Q9H4W6 MIR3670-1-201ENST00000584160 65 ntBASIC2.77□□□□□ -1.97
EBF3Q9H4W6 MIR3670-3-201ENST00000584855 65 ntBASIC2.77□□□□□ -1.97
EBF3Q9H4W6 AC060766.3-201ENST00000591442 263 ntBASIC2.77□□□□□ -1.97
EBF3Q9H4W6 HSPE1P7-201ENST00000604681 321 ntBASIC2.77□□□□□ -1.97
EBF3Q9H4W6 MIR3670-4-201ENST00000612260 65 ntBASIC2.77□□□□□ -1.97
EBF3Q9H4W6 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.77□□□□□ -1.97
EBF3Q9H4W6 AC011476.5-201ENST00000615594 130 ntBASIC2.77□□□□□ -1.97
EBF3Q9H4W6 MIR6134-201ENST00000617606 109 ntBASIC2.77□□□□□ -1.97
EBF3Q9H4W6 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
EBF3Q9H4W6 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.76□□□□□ -1.97
EBF3Q9H4W6 MIR26A1-201ENST00000362205 77 ntBASIC2.76□□□□□ -1.97
EBF3Q9H4W6 Y_RNA.29-201ENST00000362570 113 ntBASIC2.76□□□□□ -1.97
EBF3Q9H4W6 RNU6-78P-201ENST00000362897 107 ntBASIC2.76□□□□□ -1.97
EBF3Q9H4W6 Y_RNA.352-201ENST00000365439 102 ntBASIC2.76□□□□□ -1.97
EBF3Q9H4W6 Y_RNA.439-201ENST00000384119 94 ntBASIC2.76□□□□□ -1.97
EBF3Q9H4W6 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.76□□□□□ -1.97
EBF3Q9H4W6 AC099548.1-201ENST00000421443 426 ntBASIC2.76□□□□□ -1.97
EBF3Q9H4W6 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.76□□□□□ -1.97
EBF3Q9H4W6 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
EBF3Q9H4W6 AL513124.1-201ENST00000450410 614 ntBASIC2.76□□□□□ -1.97
EBF3Q9H4W6 AC006026.2-201ENST00000457376 180 ntBASIC2.76□□□□□ -1.97
EBF3Q9H4W6 RN7SKP210-201ENST00000459176 261 ntBASIC2.76□□□□□ -1.97
EBF3Q9H4W6 RNU7-87P-201ENST00000459343 62 ntBASIC2.76□□□□□ -1.97
EBF3Q9H4W6 AC090525.1-201ENST00000479116 478 ntBASIC2.76□□□□□ -1.97
EBF3Q9H4W6 RPS27AP10-201ENST00000496103 208 ntBASIC2.76□□□□□ -1.97
EBF3Q9H4W6 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.76□□□□□ -1.97
EBF3Q9H4W6 SCARNA24.2-201ENST00000516968 130 ntBASIC2.76□□□□□ -1.97
EBF3Q9H4W6 AP004607.1-201ENST00000524456 203 ntBASIC2.76□□□□□ -1.97
EBF3Q9H4W6 MRPS36P4-201ENST00000534436 298 ntBASIC2.76□□□□□ -1.97
EBF3Q9H4W6 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.76□□□□□ -1.97
EBF3Q9H4W6 AL137100.2-201ENST00000555786 315 ntBASIC2.76□□□□□ -1.97
EBF3Q9H4W6 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 165.7 ms