Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.93□□□□□ -2.1
UBQLN3Q9H347 RNU6-358P-201ENST00000516564 75 ntBASIC1.93□□□□□ -2.1
UBQLN3Q9H347 RNU6-1098P-201ENST00000516772 96 ntBASIC1.93□□□□□ -2.1
UBQLN3Q9H347 RNU6-566P-201ENST00000516790 107 ntBASIC1.93□□□□□ -2.1
UBQLN3Q9H347 RNA5SP454-201ENST00000517231 127 ntBASIC1.93□□□□□ -2.1
UBQLN3Q9H347 AP005660.1-201ENST00000522972 293 ntBASIC1.93□□□□□ -2.1
UBQLN3Q9H347 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.93□□□□□ -2.1
UBQLN3Q9H347 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.93□□□□□ -2.1
UBQLN3Q9H347 ANP32BP3-201ENST00000559213 706 ntBASIC1.93□□□□□ -2.1
UBQLN3Q9H347 AC060780.3-201ENST00000589464 80 ntBASIC1.93□□□□□ -2.1
UBQLN3Q9H347 AC009994.1-201ENST00000606889 253 ntBASIC1.93□□□□□ -2.1
UBQLN3Q9H347 AL359314.1-201ENST00000616913 261 ntBASIC1.93□□□□□ -2.1
UBQLN3Q9H347 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.92□□□□□ -2.1
UBQLN3Q9H347 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
UBQLN3Q9H347 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
UBQLN3Q9H347 Y_RNA.248-201ENST00000364501 109 ntBASIC1.92□□□□□ -2.1
UBQLN3Q9H347 RNA5SP160-201ENST00000364866 120 ntBASIC1.92□□□□□ -2.1
UBQLN3Q9H347 Y_RNA.301-201ENST00000364990 103 ntBASIC1.92□□□□□ -2.1
UBQLN3Q9H347 SNORA18.2-201ENST00000383865 132 ntBASIC1.92□□□□□ -2.1
UBQLN3Q9H347 RNU11-3P-201ENST00000391111 133 ntBASIC1.92□□□□□ -2.1
UBQLN3Q9H347 RNA5SP465-201ENST00000391195 109 ntBASIC1.92□□□□□ -2.1
UBQLN3Q9H347 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.92□□□□□ -2.1
UBQLN3Q9H347 FGF7P6-202ENST00000451282 293 ntBASIC1.92□□□□□ -2.1
UBQLN3Q9H347 RPL23AP3-201ENST00000453844 468 ntBASIC1.92□□□□□ -2.1
UBQLN3Q9H347 snoU13.15-201ENST00000459407 104 ntBASIC1.92□□□□□ -2.1
UBQLN3Q9H347 AC087477.1-201ENST00000465747 340 ntBASIC1.92□□□□□ -2.1
UBQLN3Q9H347 AF186996.7-201ENST00000492781 209 ntBASIC1.92□□□□□ -2.1
UBQLN3Q9H347 YWHAEP4-201ENST00000505390 198 ntBASIC1.92□□□□□ -2.1
UBQLN3Q9H347 RNU1-40P-201ENST00000516816 164 ntBASIC1.92□□□□□ -2.1
UBQLN3Q9H347 RNU1-97P-201ENST00000516872 164 ntBASIC1.92□□□□□ -2.1
UBQLN3Q9H347 RNU1-54P-201ENST00000517181 120 ntBASIC1.92□□□□□ -2.1
UBQLN3Q9H347 AP003033.1-201ENST00000527244 415 ntBASIC1.92□□□□□ -2.1
UBQLN3Q9H347 MIR4790-201ENST00000577799 79 ntBASIC1.92□□□□□ -2.1
UBQLN3Q9H347 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.92□□□□□ -2.1
UBQLN3Q9H347 AC011712.1-201ENST00000588959 234 ntBASIC1.92□□□□□ -2.1
UBQLN3Q9H347 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.92□□□□□ -2.1
UBQLN3Q9H347 AC130454.1-201ENST00000622948 401 ntBASIC1.92□□□□□ -2.1
UBQLN3Q9H347 MTND4P5-201ENST00000435821 1374 ntBASIC1.91□□□□□ -2.1
UBQLN3Q9H347 SNORD50.1-201ENST00000362987 71 ntBASIC1.91□□□□□ -2.1
UBQLN3Q9H347 Y_RNA.99-201ENST00000363138 105 ntBASIC1.91□□□□□ -2.1
UBQLN3Q9H347 SNORA67.3-201ENST00000384366 140 ntBASIC1.91□□□□□ -2.1
UBQLN3Q9H347 MIR549A-201ENST00000385268 96 ntBASIC1.91□□□□□ -2.1
UBQLN3Q9H347 MIR676-201ENST00000390702 67 ntBASIC1.91□□□□□ -2.1
UBQLN3Q9H347 AL356776.1-201ENST00000406574 447 ntBASIC1.91□□□□□ -2.1
UBQLN3Q9H347 RNA5SP338-201ENST00000410495 85 ntBASIC1.91□□□□□ -2.1
UBQLN3Q9H347 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.91□□□□□ -2.1
UBQLN3Q9H347 AL158823.1-201ENST00000418441 478 ntBASIC1.91□□□□□ -2.1
UBQLN3Q9H347 AL139396.1-201ENST00000421137 167 ntBASIC1.91□□□□□ -2.1
UBQLN3Q9H347 SNRPEP8-201ENST00000442866 260 ntBASIC1.91□□□□□ -2.1
UBQLN3Q9H347 RPL23AP6-201ENST00000446637 472 ntBASIC1.91□□□□□ -2.1
UBQLN3Q9H347 FTH1P25-201ENST00000447665 469 ntBASIC1.91□□□□□ -2.1
UBQLN3Q9H347 RNU6-329P-201ENST00000459618 107 ntBASIC1.91□□□□□ -2.1
UBQLN3Q9H347 RPL23AP75-201ENST00000491601 451 ntBASIC1.91□□□□□ -2.1
UBQLN3Q9H347 RPS23P5-201ENST00000495419 428 ntBASIC1.91□□□□□ -2.1
UBQLN3Q9H347 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.91□□□□□ -2.1
UBQLN3Q9H347 ATP5EP1-201ENST00000510257 156 ntBASIC1.91□□□□□ -2.1
UBQLN3Q9H347 Y_RNA.682-201ENST00000516457 100 ntBASIC1.91□□□□□ -2.1
UBQLN3Q9H347 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.91□□□□□ -2.1
UBQLN3Q9H347 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.91□□□□□ -2.1
UBQLN3Q9H347 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.91□□□□□ -2.1
UBQLN3Q9H347 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.91□□□□□ -2.1
UBQLN3Q9H347 AC002984.1-201ENST00000591692 448 ntBASIC1.91□□□□□ -2.1
UBQLN3Q9H347 AL022345.1-201ENST00000607292 135 ntBASIC1.91□□□□□ -2.1
UBQLN3Q9H347 MIR6128-201ENST00000615528 109 ntBASIC1.91□□□□□ -2.1
UBQLN3Q9H347 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.91□□□□□ -2.1
UBQLN3Q9H347 CASC19-280ENST00000642102 1351 ntBASIC1.9□□□□□ -2.11
UBQLN3Q9H347 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
UBQLN3Q9H347 SNORD114-1-201ENST00000362705 72 ntBASIC1.9□□□□□ -2.11
UBQLN3Q9H347 RNU6-1164P-201ENST00000364428 107 ntBASIC1.9□□□□□ -2.11
UBQLN3Q9H347 RNU6-1026P-201ENST00000384465 108 ntBASIC1.9□□□□□ -2.11
UBQLN3Q9H347 AL445646.1-201ENST00000431784 216 ntBASIC1.9□□□□□ -2.11
UBQLN3Q9H347 MTND2P29-201ENST00000438595 412 ntBASIC1.9□□□□□ -2.11
UBQLN3Q9H347 AC010095.1-201ENST00000443543 144 ntBASIC1.9□□□□□ -2.11
UBQLN3Q9H347 TOMM22P6-201ENST00000465035 409 ntBASIC1.9□□□□□ -2.11
UBQLN3Q9H347 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.9□□□□□ -2.11
UBQLN3Q9H347 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.9□□□□□ -2.11
UBQLN3Q9H347 MIR4299-201ENST00000577899 72 ntBASIC1.9□□□□□ -2.11
UBQLN3Q9H347 MIR4742-201ENST00000581069 85 ntBASIC1.9□□□□□ -2.11
UBQLN3Q9H347 MIR4273-201ENST00000582824 84 ntBASIC1.9□□□□□ -2.11
UBQLN3Q9H347 AC008749.1-201ENST00000597650 306 ntBASIC1.9□□□□□ -2.11
UBQLN3Q9H347 AL109918.3-201ENST00000603072 338 ntBASIC1.9□□□□□ -2.11
UBQLN3Q9H347 AC016727.2-201ENST00000603988 621 ntBASIC1.9□□□□□ -2.11
UBQLN3Q9H347 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.9□□□□□ -2.11
UBQLN3Q9H347 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.9□□□□□ -2.11
UBQLN3Q9H347 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.9□□□□□ -2.11
UBQLN3Q9H347 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.9□□□□□ -2.11
UBQLN3Q9H347 AC098657.3-201ENST00000620434 263 ntBASIC1.9□□□□□ -2.11
UBQLN3Q9H347 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.9□□□□□ -2.11
UBQLN3Q9H347 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.9□□□□□ -2.11
UBQLN3Q9H347 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
UBQLN3Q9H347 CBX3P1-201ENST00000325243 554 ntBASIC1.89□□□□□ -2.11
UBQLN3Q9H347 RNA5SP138-201ENST00000365098 114 ntBASIC1.89□□□□□ -2.11
UBQLN3Q9H347 RNU6-160P-201ENST00000384591 107 ntBASIC1.89□□□□□ -2.11
UBQLN3Q9H347 MIR597-201ENST00000384968 97 ntBASIC1.89□□□□□ -2.11
UBQLN3Q9H347 RNU2-2P-201ENST00000410396 191 ntBASIC1.89□□□□□ -2.11
UBQLN3Q9H347 RNU2-40P-201ENST00000410833 196 ntBASIC1.89□□□□□ -2.11
UBQLN3Q9H347 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.89□□□□□ -2.11
UBQLN3Q9H347 HMGN2P19-201ENST00000425149 265 ntBASIC1.89□□□□□ -2.11
UBQLN3Q9H347 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.89□□□□□ -2.11
UBQLN3Q9H347 HMGN2P3-201ENST00000433603 273 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 206.7 ms