Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC0.61□□□□□ -2.31
VCX3BQ9H321 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.61□□□□□ -2.31
VCX3BQ9H321 MTCO3P23-201ENST00000561363 289 ntBASIC0.61□□□□□ -2.31
VCX3BQ9H321 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.61□□□□□ -2.31
VCX3BQ9H321 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC0.61□□□□□ -2.31
VCX3BQ9H321 MIR4703-201ENST00000577728 79 ntBASIC0.61□□□□□ -2.31
VCX3BQ9H321 RSL24D1P11-201ENST00000591045 491 ntBASIC0.61□□□□□ -2.31
VCX3BQ9H321 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.61□□□□□ -2.31
VCX3BQ9H321 AC009509.4-201ENST00000619202 509 ntBASIC0.61□□□□□ -2.31
VCX3BQ9H321 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.61□□□□□ -2.31
VCX3BQ9H321 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
VCX3BQ9H321 RNU6-1214P-201ENST00000363650 109 ntBASIC0.6□□□□□ -2.31
VCX3BQ9H321 RNU6-1235P-201ENST00000384559 107 ntBASIC0.6□□□□□ -2.31
VCX3BQ9H321 MIR1-2-201ENST00000384961 85 ntBASIC0.6□□□□□ -2.31
VCX3BQ9H321 MTND3P17-201ENST00000416968 344 ntBASIC0.6□□□□□ -2.31
VCX3BQ9H321 MTCO2P34-201ENST00000421994 607 ntBASIC0.6□□□□□ -2.31
VCX3BQ9H321 AL593851.1-201ENST00000426171 157 ntBASIC0.6□□□□□ -2.31
VCX3BQ9H321 SNRPFP4-201ENST00000456366 242 ntBASIC0.6□□□□□ -2.31
VCX3BQ9H321 RNU6-498P-201ENST00000459468 107 ntBASIC0.6□□□□□ -2.31
VCX3BQ9H321 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.6□□□□□ -2.31
VCX3BQ9H321 ARL2BPP4-201ENST00000506854 471 ntBASIC0.6□□□□□ -2.31
VCX3BQ9H321 AC079140.5-201ENST00000507882 310 ntBASIC0.6□□□□□ -2.31
VCX3BQ9H321 AC090142.3-201ENST00000519012 385 ntBASIC0.6□□□□□ -2.31
VCX3BQ9H321 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.6□□□□□ -2.31
VCX3BQ9H321 TPRKBP2-201ENST00000565969 475 ntBASIC0.6□□□□□ -2.31
VCX3BQ9H321 AGGF1P4-201ENST00000568249 801 ntBASIC0.6□□□□□ -2.31
VCX3BQ9H321 CLPTM1LP1-201ENST00000604519 484 ntBASIC0.6□□□□□ -2.31
VCX3BQ9H321 AC108706.1-201ENST00000611053 297 ntBASIC0.6□□□□□ -2.31
VCX3BQ9H321 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.6□□□□□ -2.31
VCX3BQ9H321 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.6□□□□□ -2.31
VCX3BQ9H321 RNU6-1097P-201ENST00000363586 107 ntBASIC0.59□□□□□ -2.31
VCX3BQ9H321 SNORD70.1-201ENST00000391007 85 ntBASIC0.59□□□□□ -2.31
VCX3BQ9H321 RPL17P50-201ENST00000396131 546 ntBASIC0.59□□□□□ -2.31
VCX3BQ9H321 RNU4-62P-201ENST00000410125 130 ntBASIC0.59□□□□□ -2.31
VCX3BQ9H321 AC090960.1-201ENST00000421072 306 ntBASIC0.59□□□□□ -2.31
VCX3BQ9H321 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC0.59□□□□□ -2.31
VCX3BQ9H321 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.59□□□□□ -2.31
VCX3BQ9H321 AC009961.2-201ENST00000435771 251 ntBASIC0.59□□□□□ -2.31
VCX3BQ9H321 HMGN2P34-201ENST00000437647 269 ntBASIC0.59□□□□□ -2.31
VCX3BQ9H321 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.59□□□□□ -2.31
VCX3BQ9H321 AC016717.1-201ENST00000448918 286 ntBASIC0.59□□□□□ -2.31
VCX3BQ9H321 snoU13.6-201ENST00000458785 104 ntBASIC0.59□□□□□ -2.31
VCX3BQ9H321 SNORD11.1-201ENST00000459482 85 ntBASIC0.59□□□□□ -2.31
VCX3BQ9H321 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC0.59□□□□□ -2.31
VCX3BQ9H321 MTND3P3-201ENST00000505004 126 ntBASIC0.59□□□□□ -2.31
VCX3BQ9H321 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.59□□□□□ -2.31
VCX3BQ9H321 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.59□□□□□ -2.31
VCX3BQ9H321 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
VCX3BQ9H321 MIR3682-201ENST00000581338 84 ntBASIC0.59□□□□□ -2.31
VCX3BQ9H321 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC0.59□□□□□ -2.31
VCX3BQ9H321 MIR4753-201ENST00000585119 83 ntBASIC0.59□□□□□ -2.31
VCX3BQ9H321 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.59□□□□□ -2.31
VCX3BQ9H321 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC0.59□□□□□ -2.31
VCX3BQ9H321 AC016727.2-201ENST00000603988 621 ntBASIC0.59□□□□□ -2.31
VCX3BQ9H321 AC021506.2-201ENST00000612354 169 ntBASIC0.59□□□□□ -2.31
VCX3BQ9H321 uc_338.11-201ENST00000619132 160 ntBASIC0.59□□□□□ -2.31
VCX3BQ9H321 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.59□□□□□ -2.31
VCX3BQ9H321 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC0.59□□□□□ -2.32
VCX3BQ9H321 MTND4P4-201ENST00000439033 1366 ntBASIC0.58□□□□□ -2.32
VCX3BQ9H321 RNU4-28P-201ENST00000364739 141 ntBASIC0.58□□□□□ -2.32
VCX3BQ9H321 RNU4-48P-201ENST00000365559 182 ntBASIC0.58□□□□□ -2.32
VCX3BQ9H321 RNA5SP109-201ENST00000391010 116 ntBASIC0.58□□□□□ -2.32
VCX3BQ9H321 RNU6-1093P-201ENST00000391194 107 ntBASIC0.58□□□□□ -2.32
VCX3BQ9H321 AP1B1P2-201ENST00000416196 106 ntBASIC0.58□□□□□ -2.32
VCX3BQ9H321 RPS26P5-201ENST00000418544 335 ntBASIC0.58□□□□□ -2.32
VCX3BQ9H321 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.58□□□□□ -2.32
VCX3BQ9H321 RPL31P35-201ENST00000431058 377 ntBASIC0.58□□□□□ -2.32
VCX3BQ9H321 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.58□□□□□ -2.32
VCX3BQ9H321 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.58□□□□□ -2.32
VCX3BQ9H321 AL606517.2-201ENST00000442855 241 ntBASIC0.58□□□□□ -2.32
VCX3BQ9H321 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC0.58□□□□□ -2.32
VCX3BQ9H321 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC0.58□□□□□ -2.32
VCX3BQ9H321 RPL39P38-201ENST00000467018 153 ntBASIC0.58□□□□□ -2.32
VCX3BQ9H321 HMGN1P12-201ENST00000499125 195 ntBASIC0.58□□□□□ -2.32
VCX3BQ9H321 AC005178.1-201ENST00000508392 440 ntBASIC0.58□□□□□ -2.32
VCX3BQ9H321 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
VCX3BQ9H321 AC109446.2-201ENST00000567872 497 ntBASIC0.58□□□□□ -2.32
VCX3BQ9H321 AL929325.1-201ENST00000603096 117 ntBASIC0.58□□□□□ -2.32
VCX3BQ9H321 AC092354.1-201ENST00000606057 376 ntBASIC0.58□□□□□ -2.32
VCX3BQ9H321 AP001596.2-201ENST00000608410 312 ntBASIC0.58□□□□□ -2.32
VCX3BQ9H321 AC006566.1-201ENST00000608943 513 ntBASIC0.58□□□□□ -2.32
VCX3BQ9H321 AC005562.2-201ENST00000618264 111 ntBASIC0.58□□□□□ -2.32
VCX3BQ9H321 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.58□□□□□ -2.32
VCX3BQ9H321 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.58□□□□□ -2.32
VCX3BQ9H321 AL359697.1-201ENST00000624879 587 ntBASIC0.58□□□□□ -2.32
VCX3BQ9H321 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.58□□□□□ -2.32
VCX3BQ9H321 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.57□□□□□ -2.32
VCX3BQ9H321 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.57□□□□□ -2.32
VCX3BQ9H321 RNU6-975P-201ENST00000384296 105 ntBASIC0.57□□□□□ -2.32
VCX3BQ9H321 MIR520E-201ENST00000384867 87 ntBASIC0.57□□□□□ -2.32
VCX3BQ9H321 RPL21P1-201ENST00000399532 476 ntBASIC0.57□□□□□ -2.32
VCX3BQ9H321 AC004866.1-201ENST00000411748 78 ntBASIC0.57□□□□□ -2.32
VCX3BQ9H321 AC114482.1-201ENST00000418010 247 ntBASIC0.57□□□□□ -2.32
VCX3BQ9H321 Z99497.1-201ENST00000421282 135 ntBASIC0.57□□□□□ -2.32
VCX3BQ9H321 AC011233.1-201ENST00000422812 283 ntBASIC0.57□□□□□ -2.32
VCX3BQ9H321 ISCA1P6-201ENST00000427740 390 ntBASIC0.57□□□□□ -2.32
VCX3BQ9H321 ZNF736P12Y-201ENST00000443152 1243 ntBASIC0.57□□□□□ -2.32
VCX3BQ9H321 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.57□□□□□ -2.32
VCX3BQ9H321 GMFBP1-201ENST00000467831 427 ntBASIC0.57□□□□□ -2.32
VCX3BQ9H321 AC092991.1-201ENST00000477176 376 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms