Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 RNU5A-5P-201ENST00000411054 116 ntBASIC3.32□□□□□ -1.88
VPS11Q9H270 RPL32P35-201ENST00000415214 394 ntBASIC3.32□□□□□ -1.88
VPS11Q9H270 CST9LP2-201ENST00000437612 320 ntBASIC3.32□□□□□ -1.88
VPS11Q9H270 AC008267.6-201ENST00000441664 139 ntBASIC3.32□□□□□ -1.88
VPS11Q9H270 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.32□□□□□ -1.88
VPS11Q9H270 HMGB3P3-201ENST00000510526 400 ntBASIC3.32□□□□□ -1.88
VPS11Q9H270 RNU6-966P-201ENST00000516479 104 ntBASIC3.32□□□□□ -1.88
VPS11Q9H270 RN7SKP282-201ENST00000516824 299 ntBASIC3.32□□□□□ -1.88
VPS11Q9H270 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC3.32□□□□□ -1.88
VPS11Q9H270 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.32□□□□□ -1.88
VPS11Q9H270 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
VPS11Q9H270 AC233981.2-201ENST00000611524 1614 ntBASIC3.32□□□□□ -1.88
VPS11Q9H270 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
VPS11Q9H270 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.32□□□□□ -1.88
VPS11Q9H270 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
VPS11Q9H270 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.31□□□□□ -1.88
VPS11Q9H270 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
VPS11Q9H270 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.31□□□□□ -1.88
VPS11Q9H270 RNU6-1298P-201ENST00000362456 101 ntBASIC3.31□□□□□ -1.88
VPS11Q9H270 Y_RNA.262-201ENST00000364641 102 ntBASIC3.31□□□□□ -1.88
VPS11Q9H270 Y_RNA.571-201ENST00000384753 98 ntBASIC3.31□□□□□ -1.88
VPS11Q9H270 MIR554-201ENST00000384874 96 ntBASIC3.31□□□□□ -1.88
VPS11Q9H270 SNORA11-201ENST00000408789 128 ntBASIC3.31□□□□□ -1.88
VPS11Q9H270 CYCSP19-201ENST00000411715 316 ntBASIC3.31□□□□□ -1.88
VPS11Q9H270 AC024067.1-201ENST00000426199 223 ntBASIC3.31□□□□□ -1.88
VPS11Q9H270 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.31□□□□□ -1.88
VPS11Q9H270 CYCSP4-201ENST00000429682 331 ntBASIC3.31□□□□□ -1.88
VPS11Q9H270 AL445584.1-201ENST00000431451 330 ntBASIC3.31□□□□□ -1.88
VPS11Q9H270 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.31□□□□□ -1.88
VPS11Q9H270 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.31□□□□□ -1.88
VPS11Q9H270 AC115115.1-201ENST00000449927 248 ntBASIC3.31□□□□□ -1.88
VPS11Q9H270 RPL31P41-201ENST00000477967 372 ntBASIC3.31□□□□□ -1.88
VPS11Q9H270 RNU6-919P-201ENST00000516731 104 ntBASIC3.31□□□□□ -1.88
VPS11Q9H270 ACA59.2-201ENST00000517061 156 ntBASIC3.31□□□□□ -1.88
VPS11Q9H270 RNU1-45P-201ENST00000517191 141 ntBASIC3.31□□□□□ -1.88
VPS11Q9H270 SUMO2P18-201ENST00000518873 252 ntBASIC3.31□□□□□ -1.88
VPS11Q9H270 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.31□□□□□ -1.88
VPS11Q9H270 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.31□□□□□ -1.88
VPS11Q9H270 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC3.31□□□□□ -1.88
VPS11Q9H270 AC034105.4-201ENST00000568304 277 ntBASIC3.31□□□□□ -1.88
VPS11Q9H270 MIR5692C2-201ENST00000577959 77 ntBASIC3.31□□□□□ -1.88
VPS11Q9H270 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.31□□□□□ -1.88
VPS11Q9H270 uc_338.1-201ENST00000612113 180 ntBASIC3.31□□□□□ -1.88
VPS11Q9H270 U4.7-201ENST00000638126 106 ntBASIC3.31□□□□□ -1.88
VPS11Q9H270 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
VPS11Q9H270 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
VPS11Q9H270 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.3□□□□□ -1.88
VPS11Q9H270 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.3□□□□□ -1.88
VPS11Q9H270 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.3□□□□□ -1.88
VPS11Q9H270 RNU4-35P-201ENST00000362588 141 ntBASIC3.3□□□□□ -1.88
VPS11Q9H270 RNU6-942P-201ENST00000363002 107 ntBASIC3.3□□□□□ -1.88
VPS11Q9H270 RNU6-626P-201ENST00000363354 107 ntBASIC3.3□□□□□ -1.88
VPS11Q9H270 RNU4-84P-201ENST00000364200 139 ntBASIC3.3□□□□□ -1.88
VPS11Q9H270 RNU6-1175P-201ENST00000365200 107 ntBASIC3.3□□□□□ -1.88
VPS11Q9H270 Y_RNA.412-201ENST00000384001 104 ntBASIC3.3□□□□□ -1.88
VPS11Q9H270 RNU6-20P-201ENST00000384106 107 ntBASIC3.3□□□□□ -1.88
VPS11Q9H270 RNU6-748P-201ENST00000384648 107 ntBASIC3.3□□□□□ -1.88
VPS11Q9H270 MIR32-201ENST00000384965 70 ntBASIC3.3□□□□□ -1.88
VPS11Q9H270 SNORD17-201ENST00000390930 237 ntBASIC3.3□□□□□ -1.88
VPS11Q9H270 AL512633.1-201ENST00000399931 655 ntBASIC3.3□□□□□ -1.88
VPS11Q9H270 RN7SKP27-201ENST00000410684 333 ntBASIC3.3□□□□□ -1.88
VPS11Q9H270 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.3□□□□□ -1.88
VPS11Q9H270 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.3□□□□□ -1.88
VPS11Q9H270 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.3□□□□□ -1.88
VPS11Q9H270 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.3□□□□□ -1.88
VPS11Q9H270 RN7SL601P-201ENST00000471221 293 ntBASIC3.3□□□□□ -1.88
VPS11Q9H270 AC010409.1-201ENST00000487382 476 ntBASIC3.3□□□□□ -1.88
VPS11Q9H270 AF186996.7-201ENST00000492781 209 ntBASIC3.3□□□□□ -1.88
VPS11Q9H270 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.3□□□□□ -1.88
VPS11Q9H270 SEM1P1-201ENST00000506694 209 ntBASIC3.3□□□□□ -1.88
VPS11Q9H270 FCF1P8-201ENST00000510322 597 ntBASIC3.3□□□□□ -1.88
VPS11Q9H270 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.3□□□□□ -1.88
VPS11Q9H270 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.3□□□□□ -1.88
VPS11Q9H270 AC011471.1-201ENST00000585766 187 ntBASIC3.3□□□□□ -1.88
VPS11Q9H270 AC006130.2-201ENST00000586202 326 ntBASIC3.3□□□□□ -1.88
VPS11Q9H270 AC024153.1-201ENST00000603103 365 ntBASIC3.3□□□□□ -1.88
VPS11Q9H270 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.3□□□□□ -1.88
VPS11Q9H270 AL121772.2-201ENST00000614331 297 ntBASIC3.3□□□□□ -1.88
VPS11Q9H270 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
VPS11Q9H270 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
VPS11Q9H270 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.3□□□□□ -1.88
VPS11Q9H270 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
VPS11Q9H270 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
VPS11Q9H270 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
VPS11Q9H270 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.3□□□□□ -1.88
VPS11Q9H270 AL356274.2-201ENST00000624379 3752 ntBASIC3.29□□□□□ -1.88
VPS11Q9H270 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
VPS11Q9H270 RNU4-56P-201ENST00000364700 142 ntBASIC3.29□□□□□ -1.88
VPS11Q9H270 DYNLT3P1-201ENST00000378574 347 ntBASIC3.29□□□□□ -1.88
VPS11Q9H270 SNORA46.1-201ENST00000391069 153 ntBASIC3.29□□□□□ -1.88
VPS11Q9H270 FTH1P15-201ENST00000406984 280 ntBASIC3.29□□□□□ -1.88
VPS11Q9H270 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.29□□□□□ -1.88
VPS11Q9H270 SEPT7P4-201ENST00000437076 306 ntBASIC3.29□□□□□ -1.88
VPS11Q9H270 AC009969.1-201ENST00000438726 172 ntBASIC3.29□□□□□ -1.88
VPS11Q9H270 AC096638.1-201ENST00000444678 216 ntBASIC3.29□□□□□ -1.88
VPS11Q9H270 AL441985.1-201ENST00000457727 251 ntBASIC3.29□□□□□ -1.88
VPS11Q9H270 AC117440.1-201ENST00000474107 571 ntBASIC3.29□□□□□ -1.88
VPS11Q9H270 MRPS36P2-201ENST00000512569 299 ntBASIC3.29□□□□□ -1.88
VPS11Q9H270 SNORA40.9-201ENST00000515895 93 ntBASIC3.29□□□□□ -1.88
VPS11Q9H270 RNU6-377P-201ENST00000515965 102 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 184.6 ms