Protein–RNA interactions for Protein: Q9H0I3

CCDC113, Coiled-coil domain-containing protein 113, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113Q9H0I3 CYCSP23-201ENST00000519781 313 ntBASIC3.45□□□□□ -1.86
CCDC113Q9H0I3 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.45□□□□□ -1.86
CCDC113Q9H0I3 AC023824.2-201ENST00000566185 400 ntBASIC3.45□□□□□ -1.86
CCDC113Q9H0I3 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.45□□□□□ -1.86
CCDC113Q9H0I3 MIR4503-201ENST00000582187 83 ntBASIC3.45□□□□□ -1.86
CCDC113Q9H0I3 MIR5006-201ENST00000583027 110 ntBASIC3.45□□□□□ -1.86
CCDC113Q9H0I3 MIR3149-201ENST00000584629 83 ntBASIC3.45□□□□□ -1.86
CCDC113Q9H0I3 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.45□□□□□ -1.86
CCDC113Q9H0I3 U1.23-201ENST00000610293 146 ntBASIC3.45□□□□□ -1.86
CCDC113Q9H0I3 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.45□□□□□ -1.86
CCDC113Q9H0I3 TCL6_2.1-201ENST00000615162 119 ntBASIC3.45□□□□□ -1.86
CCDC113Q9H0I3 RNU1-68P-201ENST00000615382 146 ntBASIC3.45□□□□□ -1.86
CCDC113Q9H0I3 AC010205.1-201ENST00000616668 449 ntBASIC3.45□□□□□ -1.86
CCDC113Q9H0I3 MIR5739-201ENST00000619803 80 ntBASIC3.45□□□□□ -1.86
CCDC113Q9H0I3 U1.39-201ENST00000621562 146 ntBASIC3.45□□□□□ -1.86
CCDC113Q9H0I3 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CCDC113Q9H0I3 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.45□□□□□ -1.86
CCDC113Q9H0I3 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
CCDC113Q9H0I3 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
CCDC113Q9H0I3 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC113Q9H0I3 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC113Q9H0I3 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC113Q9H0I3 RNU6-1145P-201ENST00000384246 107 ntBASIC3.44□□□□□ -1.86
CCDC113Q9H0I3 MIR483-201ENST00000385070 76 ntBASIC3.44□□□□□ -1.86
CCDC113Q9H0I3 AL513477.1-202ENST00000417061 214 ntBASIC3.44□□□□□ -1.86
CCDC113Q9H0I3 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.44□□□□□ -1.86
CCDC113Q9H0I3 AC004386.2-201ENST00000441858 148 ntBASIC3.44□□□□□ -1.86
CCDC113Q9H0I3 MIR4325-201ENST00000583049 90 ntBASIC3.44□□□□□ -1.86
CCDC113Q9H0I3 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.44□□□□□ -1.86
CCDC113Q9H0I3 MIR622-201ENST00000638396 96 ntBASIC3.44□□□□□ -1.86
CCDC113Q9H0I3 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC113Q9H0I3 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
CCDC113Q9H0I3 MTND5P35-201ENST00000557537 1720 ntBASIC3.44□□□□□ -1.86
CCDC113Q9H0I3 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.43□□□□□ -1.86
CCDC113Q9H0I3 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CCDC113Q9H0I3 Y_RNA.143-201ENST00000363520 106 ntBASIC3.43□□□□□ -1.86
CCDC113Q9H0I3 SNORA18.2-201ENST00000383865 132 ntBASIC3.43□□□□□ -1.86
CCDC113Q9H0I3 Y_RNA.512-201ENST00000384518 102 ntBASIC3.43□□□□□ -1.86
CCDC113Q9H0I3 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.43□□□□□ -1.86
CCDC113Q9H0I3 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.43□□□□□ -1.86
CCDC113Q9H0I3 AC008885.1-201ENST00000514930 301 ntBASIC3.43□□□□□ -1.86
CCDC113Q9H0I3 RNU2-44P-201ENST00000516795 194 ntBASIC3.43□□□□□ -1.86
CCDC113Q9H0I3 AC005000.2-201ENST00000605468 310 ntBASIC3.43□□□□□ -1.86
CCDC113Q9H0I3 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.43□□□□□ -1.86
CCDC113Q9H0I3 U6.104-201ENST00000637979 90 ntBASIC3.43□□□□□ -1.86
CCDC113Q9H0I3 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
CCDC113Q9H0I3 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC113Q9H0I3 RNU1-62P-201ENST00000362599 164 ntBASIC3.42□□□□□ -1.86
CCDC113Q9H0I3 Y_RNA.64-201ENST00000362845 102 ntBASIC3.42□□□□□ -1.86
CCDC113Q9H0I3 RNU6-727P-201ENST00000363592 107 ntBASIC3.42□□□□□ -1.86
CCDC113Q9H0I3 Y_RNA.556-201ENST00000384677 113 ntBASIC3.42□□□□□ -1.86
CCDC113Q9H0I3 SNORA48.2-201ENST00000390926 124 ntBASIC3.42□□□□□ -1.86
CCDC113Q9H0I3 SNORA48.5-201ENST00000391143 135 ntBASIC3.42□□□□□ -1.86
CCDC113Q9H0I3 AL079342.1-201ENST00000401460 267 ntBASIC3.42□□□□□ -1.86
CCDC113Q9H0I3 AL033519.2-201ENST00000403958 392 ntBASIC3.42□□□□□ -1.86
CCDC113Q9H0I3 MRPL35P1-201ENST00000404272 572 ntBASIC3.42□□□□□ -1.86
CCDC113Q9H0I3 MIR1294-201ENST00000408503 142 ntBASIC3.42□□□□□ -1.86
CCDC113Q9H0I3 RNU6-130P-201ENST00000411112 103 ntBASIC3.42□□□□□ -1.86
CCDC113Q9H0I3 RPL32P35-201ENST00000415214 394 ntBASIC3.42□□□□□ -1.86
CCDC113Q9H0I3 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.42□□□□□ -1.86
CCDC113Q9H0I3 UQCRBP2-201ENST00000447827 297 ntBASIC3.42□□□□□ -1.86
CCDC113Q9H0I3 AC090515.1-201ENST00000465295 476 ntBASIC3.42□□□□□ -1.86
CCDC113Q9H0I3 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.42□□□□□ -1.86
CCDC113Q9H0I3 MZT1P2-201ENST00000604387 248 ntBASIC3.42□□□□□ -1.86
CCDC113Q9H0I3 RPL17P51-201ENST00000605218 238 ntBASIC3.42□□□□□ -1.86
CCDC113Q9H0I3 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.42□□□□□ -1.86
CCDC113Q9H0I3 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.42□□□□□ -1.86
CCDC113Q9H0I3 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
CCDC113Q9H0I3 Y_RNA.452-201ENST00000384202 108 ntBASIC3.41□□□□□ -1.86
CCDC113Q9H0I3 MIR128-1-201ENST00000384921 82 ntBASIC3.41□□□□□ -1.86
CCDC113Q9H0I3 MIR1302-6-201ENST00000408466 90 ntBASIC3.41□□□□□ -1.86
CCDC113Q9H0I3 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC113Q9H0I3 CYP2C59P-201ENST00000457790 269 ntBASIC3.41□□□□□ -1.86
CCDC113Q9H0I3 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.41□□□□□ -1.86
CCDC113Q9H0I3 RNU6-408P-201ENST00000515910 100 ntBASIC3.41□□□□□ -1.86
CCDC113Q9H0I3 RNA5SP217-201ENST00000515959 91 ntBASIC3.41□□□□□ -1.86
CCDC113Q9H0I3 AC245166.1-201ENST00000521012 253 ntBASIC3.41□□□□□ -1.86
CCDC113Q9H0I3 AC004817.2-201ENST00000561794 651 ntBASIC3.41□□□□□ -1.86
CCDC113Q9H0I3 AL713866.2-201ENST00000603579 219 ntBASIC3.41□□□□□ -1.86
CCDC113Q9H0I3 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC113Q9H0I3 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.4□□□□□ -1.86
CCDC113Q9H0I3 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CCDC113Q9H0I3 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CCDC113Q9H0I3 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.4□□□□□ -1.87
CCDC113Q9H0I3 Y_RNA.222-201ENST00000364264 102 ntBASIC3.4□□□□□ -1.87
CCDC113Q9H0I3 RNU6-702P-201ENST00000364982 107 ntBASIC3.4□□□□□ -1.87
CCDC113Q9H0I3 Y_RNA.498-201ENST00000384460 102 ntBASIC3.4□□□□□ -1.87
CCDC113Q9H0I3 RNU6-1274P-201ENST00000384557 107 ntBASIC3.4□□□□□ -1.87
CCDC113Q9H0I3 FO393413.1-201ENST00000402892 195 ntBASIC3.4□□□□□ -1.87
CCDC113Q9H0I3 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.4□□□□□ -1.87
CCDC113Q9H0I3 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC113Q9H0I3 AC007395.1-201ENST00000451333 677 ntBASIC3.4□□□□□ -1.87
CCDC113Q9H0I3 AC080013.2-201ENST00000460866 323 ntBASIC3.4□□□□□ -1.87
CCDC113Q9H0I3 S100A11P2-201ENST00000467589 312 ntBASIC3.4□□□□□ -1.87
CCDC113Q9H0I3 RPS23P5-201ENST00000495419 428 ntBASIC3.4□□□□□ -1.87
CCDC113Q9H0I3 SNORA40.9-201ENST00000515895 93 ntBASIC3.4□□□□□ -1.87
CCDC113Q9H0I3 RNA5SP341-201ENST00000516261 117 ntBASIC3.4□□□□□ -1.87
CCDC113Q9H0I3 RNU5F-4P-201ENST00000516581 114 ntBASIC3.4□□□□□ -1.87
CCDC113Q9H0I3 RNU6-56P-201ENST00000516986 93 ntBASIC3.4□□□□□ -1.87
CCDC113Q9H0I3 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms