Protein–RNA interactions for Protein: Q9H078

CLPB, Caseinolytic peptidase B protein homolog, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPBQ9H078 Y_RNA.451-201ENST00000384200 100 ntBASIC2.57□□□□□ -2
CLPBQ9H078 RNU6-378P-201ENST00000384324 107 ntBASIC2.57□□□□□ -2
CLPBQ9H078 Y_RNA.524-201ENST00000384564 100 ntBASIC2.57□□□□□ -2
CLPBQ9H078 Y_RNA.561-201ENST00000384694 100 ntBASIC2.57□□□□□ -2
CLPBQ9H078 MIR32-201ENST00000384965 70 ntBASIC2.57□□□□□ -2
CLPBQ9H078 MIR208B-201ENST00000401172 77 ntBASIC2.57□□□□□ -2
CLPBQ9H078 AC007098.1-201ENST00000420122 367 ntBASIC2.57□□□□□ -2
CLPBQ9H078 SUMO1P4-201ENST00000429430 302 ntBASIC2.57□□□□□ -2
CLPBQ9H078 RNA5SP282-201ENST00000516355 108 ntBASIC2.57□□□□□ -2
CLPBQ9H078 Y_RNA.701-201ENST00000516812 110 ntBASIC2.57□□□□□ -2
CLPBQ9H078 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.57□□□□□ -2
CLPBQ9H078 AC109329.2-201ENST00000519658 482 ntBASIC2.57□□□□□ -2
CLPBQ9H078 EIF4A1P12-201ENST00000551910 141 ntBASIC2.57□□□□□ -2
CLPBQ9H078 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.57□□□□□ -2
CLPBQ9H078 AC023824.2-201ENST00000566185 400 ntBASIC2.57□□□□□ -2
CLPBQ9H078 AC091925.1-201ENST00000623204 462 ntBASIC2.57□□□□□ -2
CLPBQ9H078 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.57□□□□□ -2
CLPBQ9H078 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.56□□□□□ -2
CLPBQ9H078 RNA5SP393-201ENST00000363423 117 ntBASIC2.56□□□□□ -2
CLPBQ9H078 U3.9-201ENST00000363823 204 ntBASIC2.56□□□□□ -2
CLPBQ9H078 RNU6-694P-201ENST00000364071 147 ntBASIC2.56□□□□□ -2
CLPBQ9H078 Y_RNA.252-201ENST00000364556 101 ntBASIC2.56□□□□□ -2
CLPBQ9H078 DEFA7P-201ENST00000382676 285 ntBASIC2.56□□□□□ -2
CLPBQ9H078 MIR190B-201ENST00000401119 79 ntBASIC2.56□□□□□ -2
CLPBQ9H078 RNU2-63P-201ENST00000410792 194 ntBASIC2.56□□□□□ -2
CLPBQ9H078 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.56□□□□□ -2
CLPBQ9H078 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC2.56□□□□□ -2
CLPBQ9H078 MTND1P14-201ENST00000427400 950 ntBASIC2.56□□□□□ -2
CLPBQ9H078 AC099799.1-201ENST00000439809 192 ntBASIC2.56□□□□□ -2
CLPBQ9H078 AL137792.2-201ENST00000443484 235 ntBASIC2.56□□□□□ -2
CLPBQ9H078 AC007215.1-201ENST00000464893 276 ntBASIC2.56□□□□□ -2
CLPBQ9H078 Y_RNA.706-201ENST00000516933 99 ntBASIC2.56□□□□□ -2
CLPBQ9H078 RNU6-699P-201ENST00000517081 110 ntBASIC2.56□□□□□ -2
CLPBQ9H078 AC027288.2-201ENST00000553028 243 ntBASIC2.56□□□□□ -2
CLPBQ9H078 AC091544.4-201ENST00000555268 342 ntBASIC2.56□□□□□ -2
CLPBQ9H078 MIR5092-201ENST00000583139 88 ntBASIC2.56□□□□□ -2
CLPBQ9H078 AC044792.1-201ENST00000593294 196 ntBASIC2.56□□□□□ -2
CLPBQ9H078 AC116312.1-201ENST00000606841 314 ntBASIC2.56□□□□□ -2
CLPBQ9H078 AL355802.3-201ENST00000607571 545 ntBASIC2.56□□□□□ -2
CLPBQ9H078 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.56□□□□□ -2
CLPBQ9H078 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.56□□□□□ -2
CLPBQ9H078 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CLPBQ9H078 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.56□□□□□ -2
CLPBQ9H078 Z82209.1-201ENST00000422141 2135 ntBASIC2.56□□□□□ -2
CLPBQ9H078 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
CLPBQ9H078 Y_RNA.5-201ENST00000362334 102 ntBASIC2.55□□□□□ -2
CLPBQ9H078 RNU6-944P-201ENST00000364023 107 ntBASIC2.55□□□□□ -2
CLPBQ9H078 RNA5SP125-201ENST00000364843 120 ntBASIC2.55□□□□□ -2
CLPBQ9H078 Y_RNA.597-201ENST00000410463 100 ntBASIC2.55□□□□□ -2
CLPBQ9H078 AL354751.2-201ENST00000415471 210 ntBASIC2.55□□□□□ -2
CLPBQ9H078 AC018865.2-201ENST00000423631 129 ntBASIC2.55□□□□□ -2
CLPBQ9H078 CBX3P6-201ENST00000430257 527 ntBASIC2.55□□□□□ -2
CLPBQ9H078 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.55□□□□□ -2
CLPBQ9H078 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.55□□□□□ -2
CLPBQ9H078 SRIP1-201ENST00000489235 288 ntBASIC2.55□□□□□ -2
CLPBQ9H078 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.55□□□□□ -2
CLPBQ9H078 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.55□□□□□ -2
CLPBQ9H078 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.55□□□□□ -2
CLPBQ9H078 uc_338.22-201ENST00000622722 187 ntBASIC2.55□□□□□ -2
CLPBQ9H078 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.55□□□□□ -2
CLPBQ9H078 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.55□□□□□ -2
CLPBQ9H078 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.54□□□□□ -2
CLPBQ9H078 MIR6073-201ENST00000352083 89 ntBASIC2.54□□□□□ -2
CLPBQ9H078 MIR369-201ENST00000362155 70 ntBASIC2.54□□□□□ -2
CLPBQ9H078 RNU6-874P-201ENST00000362390 105 ntBASIC2.54□□□□□ -2
CLPBQ9H078 Y_RNA.319-201ENST00000365138 92 ntBASIC2.54□□□□□ -2
CLPBQ9H078 RNU6-1156P-201ENST00000410365 100 ntBASIC2.54□□□□□ -2
CLPBQ9H078 RNA5SP508-201ENST00000411327 119 ntBASIC2.54□□□□□ -2
CLPBQ9H078 MRPS18CP6-201ENST00000423587 223 ntBASIC2.54□□□□□ -2
CLPBQ9H078 MTCO2P12-201ENST00000427426 682 ntBASIC2.54□□□□□ -2
CLPBQ9H078 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.54□□□□□ -2
CLPBQ9H078 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.54□□□□□ -2
CLPBQ9H078 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.54□□□□□ -2
CLPBQ9H078 AC007677.1-201ENST00000445757 515 ntBASIC2.54□□□□□ -2
CLPBQ9H078 TOMM22P6-201ENST00000465035 409 ntBASIC2.54□□□□□ -2
CLPBQ9H078 SNORA31.11-201ENST00000516528 139 ntBASIC2.54□□□□□ -2
CLPBQ9H078 RNU6-1198P-201ENST00000516904 67 ntBASIC2.54□□□□□ -2
CLPBQ9H078 RNA5SP54-201ENST00000516951 92 ntBASIC2.54□□□□□ -2
CLPBQ9H078 SNRPGP18-201ENST00000553000 214 ntBASIC2.54□□□□□ -2
CLPBQ9H078 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.54□□□□□ -2
CLPBQ9H078 MIR4719-201ENST00000585233 84 ntBASIC2.54□□□□□ -2
CLPBQ9H078 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.54□□□□□ -2
CLPBQ9H078 AC134503.1-201ENST00000633048 54 ntBASIC2.54□□□□□ -2
CLPBQ9H078 AC135776.4-201ENST00000624300 1904 ntBASIC2.54□□□□□ -2
CLPBQ9H078 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.53□□□□□ -2
CLPBQ9H078 Y_RNA.138-201ENST00000363462 102 ntBASIC2.53□□□□□ -2
CLPBQ9H078 Y_RNA.496-201ENST00000384444 101 ntBASIC2.53□□□□□ -2
CLPBQ9H078 MIR625-201ENST00000385047 85 ntBASIC2.53□□□□□ -2
CLPBQ9H078 SNORA12-201ENST00000391162 147 ntBASIC2.53□□□□□ -2
CLPBQ9H078 RNU6-1093P-201ENST00000391194 107 ntBASIC2.53□□□□□ -2
CLPBQ9H078 AC092423.1-201ENST00000430165 186 ntBASIC2.53□□□□□ -2
CLPBQ9H078 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.53□□□□□ -2
CLPBQ9H078 CKS1BP2-201ENST00000497342 240 ntBASIC2.53□□□□□ -2
CLPBQ9H078 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.53□□□□□ -2
CLPBQ9H078 RNA5SP320-201ENST00000516263 124 ntBASIC2.53□□□□□ -2
CLPBQ9H078 RNU7-4P-201ENST00000516961 62 ntBASIC2.53□□□□□ -2
CLPBQ9H078 RNA5SP402-201ENST00000517148 110 ntBASIC2.53□□□□□ -2
CLPBQ9H078 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.53□□□□□ -2
CLPBQ9H078 AP002770.2-201ENST00000543613 532 ntBASIC2.53□□□□□ -2
CLPBQ9H078 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 145.4 ms